RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 GYPAP02724 150 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 EWSR1Q01844 656 aaKnown RBP eCLIP8.37□□□□□ -1.07
NUP50-214ENST00000469163 C5orf47Q569G3 176 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 SLC25A34Q6PIV7 304 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 ADGRE4PQ86SQ3 457 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 CDC20BQ86Y33 519 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 ZNF418Q8TF45 676 aaPredicted RBP8.37□□□□□ -1.07
NUP50-214ENST00000469163 PPDPFQ9H3Y8 114 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 TAS2R4Q9NYW5 299 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 C17orf112F2Z3M2 114 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 ZNF121P58317 390 aaPredicted RBP8.37□□□□□ -1.07
NUP50-214ENST00000469163 IL13RA2Q14627 380 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 HLA-DRB5Q30154 266 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 WDR38Q5JTN6 314 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 PIP4P1Q86T03 277 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 NANOS1Q8WY41 292 aaKnown RBP8.37□□□□□ -1.07
NUP50-214ENST00000469163 PLPPR2Q96GM1 343 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 UBTD1Q9HAC8 227 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 ERG28Q9UKR5 140 aa8.37□□□□□ -1.07
NUP50-214ENST00000469163 NOTCH3Q9UM47 2321 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 TACC2O95359 2948 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 C10orf142B7Z368 130 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 MPIG6BO95866 241 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 NBL1P41271 181 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 SP6Q3SY56 376 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 MOB1BQ7L9L4 216 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 OR5C1Q8NGR4 320 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 RNF133Q8WVZ7 376 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 NEU4Q8WWR8 484 aaPredicted RBP8.36□□□□□ -1.07
NUP50-214ENST00000469163 CLEC7AQ9BXN2 247 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 ST20Q9HBF5 79 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 NECAP2Q9NVZ3 263 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 FLNCQ14315 2725 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 USP9XQ93008 2570 aaPredicted RBP8.36□□□□□ -1.07
NUP50-214ENST00000469163 LOC102723996A0A087X1L8 192 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 TRAV25A0A0B4J276 109 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 LOC107986453A0A1B0GWG9 222 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 A0A1W2PQD3 144 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 C5orf63A6NC05 138 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 KBTBD11O94819 623 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 VENTXO95231 258 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 MTCP1P56278 107 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 SCCPDHQ8NBX0 429 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 OR5D14Q8NGL3 314 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 SPSB4Q96A44 273 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 FOXB1Q99853 325 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 WDR61Q9GZS3 305 aaKnown RBP8.36□□□□□ -1.07
NUP50-214ENST00000469163 ERRFI1Q9UJM3 462 aaPredicted RBP8.36□□□□□ -1.07
NUP50-214ENST00000469163 UBE2J1Q9Y385 318 aaPredicted RBP8.36□□□□□ -1.07
NUP50-214ENST00000469163 TMEM14AQ9Y6G1 99 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 NRASP01111 189 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 FOXF2Q12947 444 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 ACSF3Q4G176 576 aaPredicted RBP8.36□□□□□ -1.07
NUP50-214ENST00000469163 GNPNAT1Q96EK6 184 aaPredicted RBP8.36□□□□□ -1.07
NUP50-214ENST00000469163 C1QTNF4Q9BXJ3 329 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 PROK2Q9HC23 129 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 TAAR3PQ9P1P4 343 aa8.36□□□□□ -1.07
NUP50-214ENST00000469163 LRP4O75096 1905 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 NCOA6Q14686 2063 aaPredicted RBP8.35□□□□□ -1.07
NUP50-214ENST00000469163 AMY2BP19961 511 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 NPBWR2P48146 333 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 LHX2P50458 406 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 HOXA4Q00056 320 aaPredicted RBP8.35□□□□□ -1.07
NUP50-214ENST00000469163 FBXL14Q8N1E6 418 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 OR4F5Q8NH21 305 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 JMJD8Q96S16 334 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 ST6GALNAC5Q9BVH7 336 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 CLCF1Q9UBD9 225 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 NAV2Q8IVL1 2488 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 DYSFO75923 2080 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 IGSF23A1L1A6 192 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 PSMB11A5LHX3 300 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 SIRPB1O00241 398 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 CA2P00918 260 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 CD1AP06126 327 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 GRPP07492 148 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 CSRP1P21291 193 aaKnown RBP8.35□□□□□ -1.07
NUP50-214ENST00000469163 ARFRP1Q13795 201 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 ADAMTSL5Q6ZMM2 481 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 HAPLN4Q86UW8 402 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 GNB4Q9HAV0 340 aa8.35□□□□□ -1.07
NUP50-214ENST00000469163 MED12LQ86YW9 2145 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 HMGB3O15347 200 aaKnown RBP8.34□□□□□ -1.07
NUP50-214ENST00000469163 SPRY1O43609 319 aaPredicted RBP8.34□□□□□ -1.07
NUP50-214ENST00000469163 ZNF737O75373 536 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 NTF4P34130 210 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 THBS3P49746 956 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 ZNF90Q03938 601 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 GCSAMLQ5JQS6 135 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 FA2HQ7L5A8 372 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 OR5A1Q8NGJ0 315 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 OTOSQ8NHW6 89 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 PECRQ9BY49 303 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 MS4A5Q9H3V2 200 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 A0A0G2JLM5 398 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 KBTBD11-OT1A0A1B0GTJ5 212 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 M0R135 149 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 IER3P46695 156 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 FOXL1Q12952 345 aa8.34□□□□□ -1.07
NUP50-214ENST00000469163 OR2C3Q8N628 320 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms