RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CCL28Q9NRJ3 127 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 RCL1Q9Y2P8 373 aaKnown RBP11.48□□□□□ -0.57
COL27A1-203ENST00000468565 OR2W1Q9Y3N9 320 aa11.48□□□□□ -0.57
COL27A1-203ENST00000468565 MEGF8Q7Z7M0 2845 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 F8W036 122 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 H0Y980 276 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 YPEL1O60688 119 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 PVALBP20472 110 aaPredicted RBP11.47□□□□□ -0.57
COL27A1-203ENST00000468565 UCP1P25874 307 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 CD1BP29016 333 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 REG1BP48304 166 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 SULT1A2P50226 295 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 BTN1A1Q13410 526 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 HIST2H2BDQ6DRA6 164 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 C5orf24Q7Z6I8 188 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 C5orf56Q8N8D9 126 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 UBAC2Q8NBM4 344 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 IL22RA2Q969J5 263 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 GALMQ96C23 342 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 SMIM8Q96KF7 97 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 YPEL2Q96QA6 119 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 CITED2Q99967 270 aaPredicted RBP11.47□□□□□ -0.57
COL27A1-203ENST00000468565 SMIM3Q9BZL3 60 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 SH2D7A6NKC9 451 aaPredicted RBP11.47□□□□□ -0.57
COL27A1-203ENST00000468565 MED6O75586 246 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 CENPVQ7Z7K6 275 aaPredicted RBP11.47□□□□□ -0.57
COL27A1-203ENST00000468565 TGIF2LXQ8IUE1 241 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 Q8N6K4 173 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 OR5AU1Q8NGC0 362 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 OR52L2PQ8NGH6 319 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 OR2T10Q8NGZ9 312 aa11.47□□□□□ -0.57
COL27A1-203ENST00000468565 ADARB2-AS1A8MUL3 147 aa11.46□□□□□ -0.58
COL27A1-203ENST00000468565 PGLYRP1O75594 196 aaPredicted RBP11.46□□□□□ -0.58
COL27A1-203ENST00000468565 OPN1MWP04001 364 aa11.46□□□□□ -0.58
COL27A1-203ENST00000468565 OPN1MW2P0DN77 364 aa11.46□□□□□ -0.58
COL27A1-203ENST00000468565 OPN1MW3P0DN78 364 aa11.46□□□□□ -0.58
COL27A1-203ENST00000468565 NKX2-1P43699 371 aaPredicted RBP11.46□□□□□ -0.58
COL27A1-203ENST00000468565 PJVKQ0ZLH3 352 aa11.46□□□□□ -0.58
COL27A1-203ENST00000468565 C9orf152Q5JTZ5 239 aa11.46□□□□□ -0.58
COL27A1-203ENST00000468565 EAF1Q96JC9 268 aaPredicted RBP11.46□□□□□ -0.58
COL27A1-203ENST00000468565 ABHD14AQ9BUJ0 271 aa11.46□□□□□ -0.58
COL27A1-203ENST00000468565 IGHV3-72A0A0B4J1Y9 119 aa11.45□□□□□ -0.58
COL27A1-203ENST00000468565 TMEM218A2RU14 115 aa11.45□□□□□ -0.58
COL27A1-203ENST00000468565 GATCO43716 136 aaKnown RBP11.45□□□□□ -0.58
COL27A1-203ENST00000468565 VDAC1P21796 283 aa11.45□□□□□ -0.58
COL27A1-203ENST00000468565 DEFA5Q01523 94 aa11.45□□□□□ -0.58
COL27A1-203ENST00000468565 HNF4GQ14541 408 aa11.45□□□□□ -0.58
COL27A1-203ENST00000468565 NSUN5P1Q3KNT7 163 aa11.45□□□□□ -0.58
COL27A1-203ENST00000468565 LYG1Q8N1E2 194 aa11.45□□□□□ -0.58
COL27A1-203ENST00000468565 OR4F17Q8NGA8 305 aa11.45□□□□□ -0.58
COL27A1-203ENST00000468565 OR4F4Q96R69 305 aa11.45□□□□□ -0.58
COL27A1-203ENST00000468565 ARV1Q9H2C2 271 aa11.45□□□□□ -0.58
COL27A1-203ENST00000468565 NOTCH1P46531 2555 aa11.45□□□□□ -0.58
COL27A1-203ENST00000468565 PPP1CCP36873 323 aaKnown RBP11.45□□□□□ -0.58
COL27A1-203ENST00000468565 DMBX1Q8NFW5 382 aa11.45□□□□□ -0.58
COL27A1-203ENST00000468565 IL1F10Q8WWZ1 152 aa11.45□□□□□ -0.58
COL27A1-203ENST00000468565 C12orf57Q99622 126 aa11.45□□□□□ -0.58
COL27A1-203ENST00000468565 FAM212BQ9NTI7 297 aaPredicted RBP11.45□□□□□ -0.58
COL27A1-203ENST00000468565 WIPF1O43516 503 aa11.44□□□□□ -0.58
COL27A1-203ENST00000468565 MOSP00540 346 aa11.44□□□□□ -0.58
COL27A1-203ENST00000468565 SEC11BP0C7V7 166 aa11.44□□□□□ -0.58
COL27A1-203ENST00000468565 F2RP25116 425 aa11.44□□□□□ -0.58
COL27A1-203ENST00000468565 VAMP2P63027 116 aa11.44□□□□□ -0.58
COL27A1-203ENST00000468565 DEFA6Q01524 100 aa11.44□□□□□ -0.58
COL27A1-203ENST00000468565 ODF3L1Q8IXM7 274 aa11.44□□□□□ -0.58
COL27A1-203ENST00000468565 OR4X2Q8NGF9 303 aa11.44□□□□□ -0.58
COL27A1-203ENST00000468565 SLC25A31Q9H0C2 315 aa11.44□□□□□ -0.58
COL27A1-203ENST00000468565 HRH4Q9H3N8 390 aa11.44□□□□□ -0.58
COL27A1-203ENST00000468565 PARP11Q9NR21 331 aa11.44□□□□□ -0.58
COL27A1-203ENST00000468565 LIN7CQ9NUP9 197 aaKnown RBP11.44□□□□□ -0.58
COL27A1-203ENST00000468565 HSPA12AO43301 675 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 IGHG2P01859 326 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 IFNA4P05014 189 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 LPAR6P43657 344 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 NMSQ5H8A3 153 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 TCTEX1D4Q5JR98 221 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 OR2C3Q8N628 320 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 GINS3Q9BRX5 216 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 TREM1Q9NP99 234 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 OR1A1Q9P1Q5 309 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 TNFSF12O43508 249 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 ATG12O94817 140 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 SERPINE2P07093 398 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 CAV2P51636 162 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 F2RL1P55085 397 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 EWSR1Q01844 656 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL27A1-203ENST00000468565 FAM71F2Q6NXP2 309 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 ZNF833PQ6ZTB9 187 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 SPAG16Q8N0X2 631 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 Q8N9W7 124 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 R3HDM4Q96D70 268 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 BSCL2Q96G97 398 aaPredicted RBP11.43□□□□□ -0.58
COL27A1-203ENST00000468565 TSNAXQ99598 290 aaKnown RBP11.43□□□□□ -0.58
COL27A1-203ENST00000468565 C11orf1Q9H5F2 150 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 WFDC1Q9HC57 220 aa11.43□□□□□ -0.58
COL27A1-203ENST00000468565 RBM7Q9Y580 266 aaKnown RBP11.43□□□□□ -0.58
COL27A1-203ENST00000468565 TSSC4Q9Y5U2 329 aaPredicted RBP11.43□□□□□ -0.58
COL27A1-203ENST00000468565 TCRBV4S1A1TA0A5B7 111 aa11.42□□□□□ -0.58
COL27A1-203ENST00000468565 PSMB11A5LHX3 300 aa11.42□□□□□ -0.58
COL27A1-203ENST00000468565 NCBP2LA6PVI3 153 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms