RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 PLGLAQ15195 96 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 FAM201AQ5SY85 155 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 PRR27Q6MZM9 219 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 Q8IYB0 196 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 SELENOHQ8IZQ5 122 aaKnown RBP4.98□□□□□ -1.61
SHQ1-205ENST00000468371 SGMS2Q8NHU3 365 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 RNF166Q96A37 237 aaPredicted RBP4.98□□□□□ -1.61
SHQ1-205ENST00000468371 MOB3AQ96BX8 217 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 GPR146Q96CH1 333 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 OR4C12Q96R67 309 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 HIPK2Q9H2X6 1198 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 SMDT1Q9H4I9 107 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 NAT8BQ9UHF3 227 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 CPAMD8Q8IZJ3 1885 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 DOCK11Q5JSL3 2073 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 CEACAM3P40198 252 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 PCP4P48539 62 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 CDC34P49427 236 aaPredicted RBP4.98□□□□□ -1.61
SHQ1-205ENST00000468371 CNN1P51911 297 aaKnown RBP4.98□□□□□ -1.61
SHQ1-205ENST00000468371 PTTG1IPP53801 180 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 RBM11P57052 281 aaKnown RBP4.98□□□□□ -1.61
SHQ1-205ENST00000468371 MEF2BQ02080 365 aaPredicted RBP4.98□□□□□ -1.61
SHQ1-205ENST00000468371 ICAM4Q14773 271 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 HIST3H2BBQ8N257 126 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 NOL4LQ96MY1 436 aaPredicted RBP4.98□□□□□ -1.61
SHQ1-205ENST00000468371 HIST1H2BLQ99880 126 aa4.98□□□□□ -1.61
SHQ1-205ENST00000468371 OVOL3O00110 214 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 OR7C2O60412 319 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 RPLP1P05386 114 aaKnown RBP4.97□□□□□ -1.61
SHQ1-205ENST00000468371 G6PCP35575 357 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 SRSF4Q08170 494 aaKnown RBP4.97□□□□□ -1.61
SHQ1-205ENST00000468371 TMEM183BQ1AE95 376 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 TMEM155Q4W5P6 130 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 OR5A2Q8NGI9 324 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 OR4X1Q8NH49 305 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 HSPB9Q9BQS6 159 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 CTDSP1Q9GZU7 261 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 ATMQ13315 3056 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 IQCF6A8MYZ5 107 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 HSBP1L1C9JCN9 74 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 K7N7A8 449 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 NDUFB4O95168 129 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 F2RP25116 425 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 IER3P46695 156 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 FGF12P61328 243 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 RPP30P78346 268 aaKnown RBP4.97□□□□□ -1.61
SHQ1-205ENST00000468371 Q6ZN92 141 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 LHFPL1Q86WI0 220 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 SSMEM1Q8WWF3 244 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 EDARADDQ8WWZ3 215 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 OR2D2Q9H210 308 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 NAGKQ9UJ70 344 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 A0A0U1RQV5 110 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 LOC102723971A0A1B0GUV8 181 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 TMEM178BH3BS89 294 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 LILRA1O75019 489 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 APOA2P02652 100 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 IGHV4-31P0DP07 118 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 CD33P20138 364 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 OR10J1P30954 320 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 ZNF506Q5JVG8 444 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 TMEM183AQ8IXX5 376 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 OR10X1Q8NGY0 326 aa4.97□□□□□ -1.61
SHQ1-205ENST00000468371 RCC1LQ96I51 464 aaKnown RBP4.97□□□□□ -1.61
SHQ1-205ENST00000468371 ZNF331Q9NQX6 463 aaPredicted RBP4.97□□□□□ -1.61
SHQ1-205ENST00000468371 C20orf202A1L168 122 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 HRASP01112 189 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 OR3A1P47881 315 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 QRFPP83859 136 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 FOXL1Q12952 345 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 KCNMB1Q16558 191 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 ACSM6Q6P461 480 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 DNM1P46Q6ZS02 220 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 OR2T6Q8NHC8 308 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 LYZL4Q96KX0 146 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 PARLQ9H300 379 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 GAL3ST2Q9H3Q3 398 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 VSIRQ9H7M9 311 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 SLC35D1Q9NTN3 355 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 IL36RNQ9UBH0 155 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 ARL2-SNX15V9GYD0 113 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 ARHGAP21Q5T5U3 1957 aa4.96□□□□□ -1.61
SHQ1-205ENST00000468371 MAP1AP78559 2803 aaPredicted RBP4.96□□□□□ -1.62
SHQ1-205ENST00000468371 J3QT63 122 aa4.96□□□□□ -1.62
SHQ1-205ENST00000468371 PGLYRP1O75594 196 aaPredicted RBP4.96□□□□□ -1.62
SHQ1-205ENST00000468371 MPZP25189 248 aa4.96□□□□□ -1.62
SHQ1-205ENST00000468371 PRRX1P54821 245 aa4.96□□□□□ -1.62
SHQ1-205ENST00000468371 KIAA1644Q3SXP7 199 aa4.96□□□□□ -1.62
SHQ1-205ENST00000468371 CALHM1Q8IU99 346 aa4.96□□□□□ -1.62
SHQ1-205ENST00000468371 GTF3AQ92664 365 aaKnown RBP4.96□□□□□ -1.62
SHQ1-205ENST00000468371 C1QTNF5Q9BXJ0 243 aa4.96□□□□□ -1.62
SHQ1-205ENST00000468371 RNF24Q9Y225 148 aa4.96□□□□□ -1.62
SHQ1-205ENST00000468371 OR2W1Q9Y3N9 320 aa4.96□□□□□ -1.62
SHQ1-205ENST00000468371 IGLV3-9A0A075B6K5 115 aa4.96□□□□□ -1.62
SHQ1-205ENST00000468371 SPINT2O43291 252 aa4.96□□□□□ -1.62
SHQ1-205ENST00000468371 SYNGR1O43759 233 aa4.96□□□□□ -1.62
SHQ1-205ENST00000468371 ZNF253O75346 499 aa4.96□□□□□ -1.62
SHQ1-205ENST00000468371 HSBP1O75506 76 aa4.96□□□□□ -1.62
SHQ1-205ENST00000468371 GCGP01275 180 aa4.96□□□□□ -1.62
SHQ1-205ENST00000468371 DEFA4P12838 97 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms