RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 CHRNA7P36544 502 aa11.95□□□□□ -0.5
SNIP1-202ENST00000468040 SPCS3P61009 180 aa11.95□□□□□ -0.5
SNIP1-202ENST00000468040 PRCDQ00LT1 54 aa11.95□□□□□ -0.5
SNIP1-202ENST00000468040 C19orf54Q5BKX5 351 aa11.95□□□□□ -0.5
SNIP1-202ENST00000468040 COMMD1Q8N668 190 aa11.95□□□□□ -0.5
SNIP1-202ENST00000468040 HINT2Q9BX68 163 aa11.95□□□□□ -0.5
SNIP1-202ENST00000468040 TNCP24821 2201 aa11.95□□□□□ -0.5
SNIP1-202ENST00000468040 A0A1B0GW64 132 aa11.94□□□□□ -0.5
SNIP1-202ENST00000468040 CGB1A6NKQ9 187 aa11.94□□□□□ -0.5
SNIP1-202ENST00000468040 E7EUB6 86 aa11.94□□□□□ -0.5
SNIP1-202ENST00000468040 HAX1O00165 279 aa11.94□□□□□ -0.5
SNIP1-202ENST00000468040 PLXNB1O43157 2135 aa11.94□□□□□ -0.5
SNIP1-202ENST00000468040 PITX3O75364 302 aa11.94□□□□□ -0.5
SNIP1-202ENST00000468040 CFHR3Q02985 330 aa11.94□□□□□ -0.5
SNIP1-202ENST00000468040 PDLIM3Q53GG5 364 aaPredicted RBP11.94□□□□□ -0.5
SNIP1-202ENST00000468040 OR5M8Q8NGP6 311 aa11.94□□□□□ -0.5
SNIP1-202ENST00000468040 PLEKHA3Q9HB20 300 aa11.94□□□□□ -0.5
SNIP1-202ENST00000468040 C13orf42A0A1B0GVH6 325 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 IGLC7A0M8Q6 106 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 C5orf51A6NDU8 294 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 HMX3A6NHT5 357 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 NPIPB5A8MRT5 1133 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 MPTX1A8MV57 137 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 FAM90A26D6RGX4 464 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 CCSO14618 274 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 IGHG4P01861 327 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 APELAP0DMC3 54 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 PPIFP30405 207 aaKnown RBP11.93□□□□□ -0.5
SNIP1-202ENST00000468040 IAH1Q2TAA2 248 aaPredicted RBP11.93□□□□□ -0.5
SNIP1-202ENST00000468040 ASPHD1Q5U4P2 390 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 TEX38Q6PEX7 206 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 GSG1LQ6UXU4 331 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 ZNF329Q86UD4 541 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 TTC9CQ8N5M4 171 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 OR4X2Q8NGF9 303 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 FAM110DQ8TAY7 271 aaPredicted RBP11.93□□□□□ -0.5
SNIP1-202ENST00000468040 ENY2Q9NPA8 101 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 HSPB7Q9UBY9 170 aa11.93□□□□□ -0.5
SNIP1-202ENST00000468040 FAM25EA8MYX2 175 aa11.92□□□□□ -0.5
SNIP1-202ENST00000468040 INS-IGF2F8WCM5 200 aa11.92□□□□□ -0.5
SNIP1-202ENST00000468040 H3BUA1 57 aa11.92□□□□□ -0.5
SNIP1-202ENST00000468040 GOSR2O14653 212 aa11.92□□□□□ -0.5
SNIP1-202ENST00000468040 AREGP15514 252 aa11.92□□□□□ -0.5
SNIP1-202ENST00000468040 PSMB6P28072 239 aa11.92□□□□□ -0.5
SNIP1-202ENST00000468040 HOXA1P49639 335 aaPredicted RBP11.92□□□□□ -0.5
SNIP1-202ENST00000468040 TNFRSF9Q07011 255 aa11.92□□□□□ -0.5
SNIP1-202ENST00000468040 KRTAP21-3Q3LHN1 58 aa11.92□□□□□ -0.5
SNIP1-202ENST00000468040 OR5AU1Q8NGC0 362 aa11.92□□□□□ -0.5
SNIP1-202ENST00000468040 OR10W1Q8NGF6 305 aa11.92□□□□□ -0.5
SNIP1-202ENST00000468040 WIPF2Q8TF74 440 aaPredicted RBP11.92□□□□□ -0.5
SNIP1-202ENST00000468040 WFDC12Q8WWY7 111 aa11.92□□□□□ -0.5
SNIP1-202ENST00000468040 OR10C1Q96KK4 312 aa11.92□□□□□ -0.5
SNIP1-202ENST00000468040 CEBPZOSA8MTT3 80 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 MED6O75586 246 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 NXPH3O95157 252 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 BRI3O95415 125 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 IGLV1-40P01703 118 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 CRYGCP07315 174 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 ELANEP08246 267 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 OR13C7P0DN81 318 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 ERHP84090 104 aaKnown RBP11.91□□□□□ -0.5
SNIP1-202ENST00000468040 WT1-ASQ06250 92 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 FOXE3Q13461 319 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 ZBTB8BQ8NAP8 495 aaPredicted RBP11.91□□□□□ -0.5
SNIP1-202ENST00000468040 OR5T1Q8NG75 326 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 OR4D5Q8NGN0 318 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 C2orf50Q96LR7 162 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 MED28Q9H204 178 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 GSKIPQ9P0R6 139 aa11.91□□□□□ -0.5
SNIP1-202ENST00000468040 CYB5BO43169 146 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 SOX15O60248 233 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 FBXO24O75426 580 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 PF4V1P10720 104 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 CTRB1P17538 263 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 PSMB8P28062 276 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 NKX2-1P43699 371 aaPredicted RBP11.9□□□□□ -0.5
SNIP1-202ENST00000468040 SPINK9Q5DT21 86 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 CXorf66Q5JRM2 361 aaPredicted RBP11.9□□□□□ -0.5
SNIP1-202ENST00000468040 CTRB2Q6GPI1 263 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 TET2Q6N021 2002 aaPredicted RBP11.9□□□□□ -0.5
SNIP1-202ENST00000468040 TMEM65Q6PI78 240 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 C12orf54Q6X4T0 127 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 OR2C3Q8N628 320 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 HIPK2Q9H2X6 1198 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 SLA2Q9H6Q3 261 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 ZNF355PQ9NSJ1 428 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 MGAT4CQ9UBM8 478 aa11.9□□□□□ -0.5
SNIP1-202ENST00000468040 ATRQ13535 2644 aa11.9□□□□□ -0.51
SNIP1-202ENST00000468040 WRBO00258 174 aa11.89□□□□□ -0.51
SNIP1-202ENST00000468040 LY86O95711 162 aa11.89□□□□□ -0.51
SNIP1-202ENST00000468040 REG1AP05451 166 aa11.89□□□□□ -0.51
SNIP1-202ENST00000468040 DEFA4P12838 97 aa11.89□□□□□ -0.51
SNIP1-202ENST00000468040 SNCAP37840 140 aa11.89□□□□□ -0.51
SNIP1-202ENST00000468040 CYCSP99999 105 aaKnown RBP11.89□□□□□ -0.51
SNIP1-202ENST00000468040 ID3Q02535 119 aa11.89□□□□□ -0.51
SNIP1-202ENST00000468040 C2orf68Q2NKX9 166 aa11.89□□□□□ -0.51
SNIP1-202ENST00000468040 C10orf99Q6UWK7 81 aa11.89□□□□□ -0.51
SNIP1-202ENST00000468040 RNF152Q8N8N0 203 aa11.89□□□□□ -0.51
SNIP1-202ENST00000468040 ZNF114Q8NC26 417 aa11.89□□□□□ -0.51
SNIP1-202ENST00000468040 OR1L6Q8NGR2 347 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms