RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 ZNF2Q9BSG1 426 aaPredicted RBP14.54□□□□□ -0.08
COL7A1-207ENST00000467985 FBXL7Q9UJT9 491 aa14.54□□□□□ -0.08
COL7A1-207ENST00000467985 KLK9Q9UKQ9 250 aa14.54□□□□□ -0.08
COL7A1-207ENST00000467985 ANKRD20A5PA0PJZ0 165 aa14.53□□□□□ -0.08
COL7A1-207ENST00000467985 E7EUB6 86 aa14.53□□□□□ -0.08
COL7A1-207ENST00000467985 IL7P13232 177 aa14.53□□□□□ -0.08
COL7A1-207ENST00000467985 BAK1Q16611 211 aa14.53□□□□□ -0.08
COL7A1-207ENST00000467985 CMTM1Q8IZ96 169 aa14.53□□□□□ -0.08
COL7A1-207ENST00000467985 Q8N1Y9 231 aa14.53□□□□□ -0.08
COL7A1-207ENST00000467985 OR2K2Q8NGT1 345 aa14.53□□□□□ -0.08
COL7A1-207ENST00000467985 SRSF8Q9BRL6 282 aaKnown RBP14.53□□□□□ -0.08
COL7A1-207ENST00000467985 COMMD5Q9GZQ3 224 aa14.53□□□□□ -0.08
COL7A1-207ENST00000467985 ZMAT4Q9H898 229 aa14.53□□□□□ -0.08
COL7A1-207ENST00000467985 MCUBQ9NWR8 336 aa14.53□□□□□ -0.08
COL7A1-207ENST00000467985 COMMD9Q9P000 198 aa14.53□□□□□ -0.08
COL7A1-207ENST00000467985 LINC00854A0A1B0GVQ3 168 aa14.52□□□□□ -0.09
COL7A1-207ENST00000467985 A0A1B0GW64 132 aa14.52□□□□□ -0.09
COL7A1-207ENST00000467985 A8MZ25 164 aa14.52□□□□□ -0.09
COL7A1-207ENST00000467985 DISC1C4P0D8 188 aa14.52□□□□□ -0.09
COL7A1-207ENST00000467985 GGCTO75223 188 aaKnown RBP14.52□□□□□ -0.09
COL7A1-207ENST00000467985 IGHV4-30-4P0DP06 118 aa14.52□□□□□ -0.09
COL7A1-207ENST00000467985 DEFA4P12838 97 aa14.52□□□□□ -0.09
COL7A1-207ENST00000467985 AREGP15514 252 aa14.52□□□□□ -0.09
COL7A1-207ENST00000467985 CTRB1P17538 263 aa14.52□□□□□ -0.09
COL7A1-207ENST00000467985 OR2B8PP59922 312 aa14.52□□□□□ -0.09
COL7A1-207ENST00000467985 CTRB2Q6GPI1 263 aa14.52□□□□□ -0.09
COL7A1-207ENST00000467985 GTSCR1Q86UQ5 136 aa14.52□□□□□ -0.09
COL7A1-207ENST00000467985 DMBX1Q8NFW5 382 aa14.52□□□□□ -0.09
COL7A1-207ENST00000467985 OR6F1Q8NGZ6 308 aa14.52□□□□□ -0.09
COL7A1-207ENST00000467985 SDHCQ99643 169 aaPredicted RBP14.52□□□□□ -0.09
COL7A1-207ENST00000467985 CENPXA8MT69 81 aa14.51□□□□□ -0.09
COL7A1-207ENST00000467985 UPK2O00526 184 aa14.51□□□□□ -0.09
COL7A1-207ENST00000467985 F2RP25116 425 aa14.51□□□□□ -0.09
COL7A1-207ENST00000467985 ERVK-16P61578 105 aa14.51□□□□□ -0.09
COL7A1-207ENST00000467985 SCGB2B2Q4G0G5 96 aa14.51□□□□□ -0.09
COL7A1-207ENST00000467985 OR4C16Q8NGL9 310 aa14.51□□□□□ -0.09
COL7A1-207ENST00000467985 EEF1AKMT3Q96AZ1 226 aa14.51□□□□□ -0.09
COL7A1-207ENST00000467985 FANCD2OSQ96PS1 177 aa14.51□□□□□ -0.09
COL7A1-207ENST00000467985 TMEM140Q9NV12 185 aa14.51□□□□□ -0.09
COL7A1-207ENST00000467985 CYB5BO43169 146 aa14.5□□□□□ -0.09
COL7A1-207ENST00000467985 PGLYRP1O75594 196 aaPredicted RBP14.5□□□□□ -0.09
COL7A1-207ENST00000467985 S1PR2O95136 353 aa14.5□□□□□ -0.09
COL7A1-207ENST00000467985 CD74P04233 296 aa14.5□□□□□ -0.09
COL7A1-207ENST00000467985 RLN1P04808 185 aa14.5□□□□□ -0.09
COL7A1-207ENST00000467985 S100GP29377 79 aa14.5□□□□□ -0.09
COL7A1-207ENST00000467985 MECP2P51608 486 aaKnown RBP14.5□□□□□ -0.09
COL7A1-207ENST00000467985 KLF9Q13886 244 aaPredicted RBP14.5□□□□□ -0.09
COL7A1-207ENST00000467985 THOC7Q6I9Y2 204 aaKnown RBP14.5□□□□□ -0.09
COL7A1-207ENST00000467985 FAAP20Q6NZ36 180 aa14.5□□□□□ -0.09
COL7A1-207ENST00000467985 LPCAT3Q6P1A2 487 aa14.5□□□□□ -0.09
COL7A1-207ENST00000467985 HSD17B13Q7Z5P4 300 aaPredicted RBP14.5□□□□□ -0.09
COL7A1-207ENST00000467985 CADM3Q8N126 398 aa14.5□□□□□ -0.09
COL7A1-207ENST00000467985 ARRDC1Q8N5I2 433 aa14.5□□□□□ -0.09
COL7A1-207ENST00000467985 CXorf58Q96LI9 332 aa14.5□□□□□ -0.09
COL7A1-207ENST00000467985 RCHY1Q96PM5 261 aa14.5□□□□□ -0.09
COL7A1-207ENST00000467985 DNAH7Q8WXX0 4024 aa14.5□□□□□ -0.09
COL7A1-207ENST00000467985 TRBV7-1A0A0A6YYK4 115 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 CGB1A6NKQ9 187 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 MARCH11A6NNE9 402 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 PPP5D1E7EU14 171 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 LGALS9O00182 355 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 GPR31O00270 319 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 NDUFB8O95169 186 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 ARL3P36405 182 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 C19orf35Q6ZS72 473 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 GPHB5Q86YW7 130 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 OR4D10Q8NGI6 311 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 DEDD2Q8WXF8 326 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 QTRT1Q9BXR0 403 aaKnown RBP14.49□□□□□ -0.09
COL7A1-207ENST00000467985 C19orf73Q9NVV2 129 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 THYN1Q9P016 225 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 SCP2D1Q9UJQ7 156 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 DMRT1Q9Y5R6 373 aa14.49□□□□□ -0.09
COL7A1-207ENST00000467985 HUWE1Q7Z6Z7 4374 aaKnown RBP14.48□□□□□ -0.09
COL7A1-207ENST00000467985 IGLV11-55A0A075B6I3 123 aa14.48□□□□□ -0.09
COL7A1-207ENST00000467985 TRAV3A0A0B4J244 114 aa14.48□□□□□ -0.09
COL7A1-207ENST00000467985 UPK1BO75841 260 aa14.48□□□□□ -0.09
COL7A1-207ENST00000467985 REG1AP05451 166 aa14.48□□□□□ -0.09
COL7A1-207ENST00000467985 MYOD1P15172 320 aa14.48□□□□□ -0.09
COL7A1-207ENST00000467985 PRRT1Q99946 306 aa14.48□□□□□ -0.09
COL7A1-207ENST00000467985 FXYD6Q9H0Q3 95 aa14.48□□□□□ -0.09
COL7A1-207ENST00000467985 IGLC7A0M8Q6 106 aa14.47□□□□□ -0.09
COL7A1-207ENST00000467985 C3orf84H3BNL1 204 aa14.47□□□□□ -0.09
COL7A1-207ENST00000467985 OR2C1O95371 312 aa14.47□□□□□ -0.09
COL7A1-207ENST00000467985 PGAM2P15259 253 aa14.47□□□□□ -0.09
COL7A1-207ENST00000467985 FAM106AQ4KMX7 169 aa14.47□□□□□ -0.09
COL7A1-207ENST00000467985 CLEC19AQ6UXS0 136 aa14.47□□□□□ -0.09
COL7A1-207ENST00000467985 DYNLRB2Q8TF09 96 aa14.47□□□□□ -0.09
COL7A1-207ENST00000467985 CCDC140Q96MF4 163 aa14.47□□□□□ -0.09
COL7A1-207ENST00000467985 C7orf50Q9BRJ6 194 aaKnown RBP14.47□□□□□ -0.09
COL7A1-207ENST00000467985 TM2D3Q9BRN9 247 aa14.47□□□□□ -0.09
COL7A1-207ENST00000467985 FAM212BQ9NTI7 297 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-207ENST00000467985 TECRQ9NZ01 308 aaKnown RBP14.47□□□□□ -0.09
COL7A1-207ENST00000467985 IZUMO1RA6ND01 250 aa14.46□□□□□ -0.09
COL7A1-207ENST00000467985 NAP1L6A6NFF2 107 aa14.46□□□□□ -0.09
COL7A1-207ENST00000467985 C2orf70A6NJV1 201 aa14.46□□□□□ -0.09
COL7A1-207ENST00000467985 HLA-AP01891 365 aaKnown RBP14.46□□□□□ -0.09
COL7A1-207ENST00000467985 TRAPPC2P0DI81 140 aa14.46□□□□□ -0.09
COL7A1-207ENST00000467985 TRAPPC2BP0DI82 140 aa14.46□□□□□ -0.09
COL7A1-207ENST00000467985 FOLR2P14207 255 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms