RNA–Protein interactions for RNA: ENST00000466822.1

ABCD4-204, Transcript of ATP binding cassette subfamily D member 4, human

TSL 2

Gene ABCD4, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-204	ENST00000466822	ELOVL1	Q9BW60	279 aa		11.12	□□□□□ -0.63
ABCD4-204	ENST00000466822	NDUFA4L2	Q9NRX3	87 aa		11.12	□□□□□ -0.63
ABCD4-204	ENST00000466822	TMEM14B	Q9NUH8	114 aa		11.12	□□□□□ -0.63
ABCD4-204	ENST00000466822	KCNIP3	Q9Y2W7	256 aa		11.12	□□□□□ -0.63
ABCD4-204	ENST00000466822	IGHV4OR15-8	A0A075B7B6	117 aa		11.11	□□□□□ -0.63
ABCD4-204	ENST00000466822		A0A087WW49	117 aa		11.11	□□□□□ -0.63
ABCD4-204	ENST00000466822	HMX3	A6NHT5	357 aa		11.11	□□□□□ -0.63
ABCD4-204	ENST00000466822	UCP1	P25874	307 aa		11.11	□□□□□ -0.63
ABCD4-204	ENST00000466822	G6PC	P35575	357 aa		11.11	□□□□□ -0.63
ABCD4-204	ENST00000466822	LINC00299	Q6ZSB3	139 aa		11.11	□□□□□ -0.63
ABCD4-204	ENST00000466822	OR4A16	Q8NH70	328 aa		11.11	□□□□□ -0.63
ABCD4-204	ENST00000466822	DCUN1D4	Q92564	292 aa		11.11	□□□□□ -0.63
ABCD4-204	ENST00000466822	LSM10	Q969L4	123 aa	Known RBP	11.11	□□□□□ -0.63
ABCD4-204	ENST00000466822	AKIP1	Q9NQ31	210 aa		11.11	□□□□□ -0.63
ABCD4-204	ENST00000466822	OR51B2	Q9Y5P1	312 aa		11.11	□□□□□ -0.63
ABCD4-204	ENST00000466822		V9GYH0	126 aa		11.11	□□□□□ -0.63
ABCD4-204	ENST00000466822	TRBV7-1	A0A0A6YYK4	115 aa		11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	TRAV3	A0A0B4J244	114 aa		11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	IGLC7	A0M8Q6	106 aa		11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	C15orf61	A6NNL5	157 aa		11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822		E7EUB6	86 aa		11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	APELA	P0DMC3	54 aa		11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	PPP5C	P53041	499 aa		11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	OR51S1	Q8NGJ8	323 aa		11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	OR6Q1	Q8NGQ2	317 aa		11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	DLX4	Q92988	240 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	RRNAD1	Q96FB5	475 aa	Known RBP	11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	ALX4	Q9H161	411 aa	Predicted RBP	11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	FBXL7	Q9UJT9	491 aa		11.1	□□□□□ -0.63
ABCD4-204	ENST00000466822	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822		A0A1B0GW64	132 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	CGB1	A6NKQ9	187 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	CDS2	O95674	445 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	AREG	P15514	252 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	PI3	P19957	117 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	HOXD3	P31249	432 aa	Predicted RBP	11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	HSPE1	P61604	102 aa	Known RBP	11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	ZNF45	Q02386	682 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	KLF5	Q13887	457 aa	Predicted RBP	11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	TRIM16L	Q309B1	348 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	C15orf32	Q32M92	178 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	ACSM6	Q6P461	480 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	SGPP2	Q8IWX5	399 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	IL22RA2	Q969J5	263 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	EEF1AKMT3	Q96AZ1	226 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	GALNT14	Q96FL9	552 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	FANCD2OS	Q96PS1	177 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	OR4C12	Q96R67	309 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	TP53RK	Q96S44	253 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	TMEM222	Q9H0R3	208 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	C5orf66	Q9H5L9	145 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	NAA60	Q9H7X0	242 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	MCUB	Q9NWR8	336 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	SIGLEC8	Q9NYZ4	499 aa		11.09	□□□□□ -0.63
ABCD4-204	ENST00000466822	IGLV11-55	A0A075B6I3	123 aa		11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	NAP1L6	A6NFF2	107 aa		11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	CRYM-AS1	A6NIL9	109 aa		11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	INS-IGF2	F8WCM5	200 aa		11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	RBMXL2	O75526	392 aa	Known RBP	11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	OR2J3	O76001	311 aa		11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	IGKV1-39	P01597	117 aa		11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	IGKV1D-39	P04432	117 aa		11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	OR13C7	P0DN81	318 aa		11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	ANXA3	P12429	323 aa		11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	AKR1C2	P52895	323 aa		11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	EXOSC2	Q13868	293 aa	Known RBP	11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	KLF9	Q13886	244 aa	Predicted RBP	11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	RPEL1	Q2QD12	228 aa		11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	VN1R17P	Q8TDU5	208 aa		11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	TRIM63	Q969Q1	353 aa		11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	MRGPRF	Q96AM1	343 aa		11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.08	□□□□□ -0.64
ABCD4-204	ENST00000466822	ANKRD34B	A5PLL1	514 aa		11.07	□□□□□ -0.64
ABCD4-204	ENST00000466822	GGCT	O75223	188 aa	Known RBP	11.07	□□□□□ -0.64
ABCD4-204	ENST00000466822	INPP1	P49441	399 aa		11.07	□□□□□ -0.64
ABCD4-204	ENST00000466822	SLURP1	P55000	103 aa		11.07	□□□□□ -0.64
ABCD4-204	ENST00000466822	SRPX	P78539	464 aa		11.07	□□□□□ -0.64
ABCD4-204	ENST00000466822	ERH	P84090	104 aa	Known RBP	11.07	□□□□□ -0.64
ABCD4-204	ENST00000466822	ZNF79	Q15937	498 aa		11.07	□□□□□ -0.64
ABCD4-204	ENST00000466822	FAAP20	Q6NZ36	180 aa		11.07	□□□□□ -0.64
ABCD4-204	ENST00000466822	GLYATL2	Q8WU03	294 aa		11.07	□□□□□ -0.64
ABCD4-204	ENST00000466822	RBPMS	Q93062	196 aa	Known RBP	11.07	□□□□□ -0.64
ABCD4-204	ENST00000466822	PDCD10	Q9BUL8	212 aa		11.07	□□□□□ -0.64
ABCD4-204	ENST00000466822	GAR1	Q9NY12	217 aa	Known RBP	11.07	□□□□□ -0.64
ABCD4-204	ENST00000466822	PEMT	Q9UBM1	199 aa		11.07	□□□□□ -0.64
ABCD4-204	ENST00000466822	F11R	Q9Y624	299 aa	Known RBP	11.07	□□□□□ -0.64
ABCD4-204	ENST00000466822	SAP30	O75446	220 aa		11.06	□□□□□ -0.64
ABCD4-204	ENST00000466822	NDUFB8	O95169	186 aa		11.06	□□□□□ -0.64
ABCD4-204	ENST00000466822	PRH1	P02810	166 aa		11.06	□□□□□ -0.64
ABCD4-204	ENST00000466822		P0C879	139 aa		11.06	□□□□□ -0.64
ABCD4-204	ENST00000466822	PRCD	Q00LT1	54 aa		11.06	□□□□□ -0.64
ABCD4-204	ENST00000466822	WT1-AS	Q06250	92 aa		11.06	□□□□□ -0.64
ABCD4-204	ENST00000466822	CNPY1	Q3B7I2	92 aa		11.06	□□□□□ -0.64
ABCD4-204	ENST00000466822	GPHB5	Q86YW7	130 aa		11.06	□□□□□ -0.64
ABCD4-204	ENST00000466822	OR9G4	Q8NGQ1	327 aa		11.06	□□□□□ -0.64
ABCD4-204	ENST00000466822	OR1P1	Q8NH06	330 aa		11.06	□□□□□ -0.64
ABCD4-204	ENST00000466822	OR52E5	Q8NH55	327 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms