RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 HLA-DMBP28068 263 aa1.11□□□□□ -2.23
LRCH3-211ENST00000466054 DHFR2Q86XF0 187 aa1.11□□□□□ -2.23
LRCH3-211ENST00000466054 GPR32P1Q8NGA4 272 aa1.11□□□□□ -2.23
LRCH3-211ENST00000466054 ERMAPQ96PL5 475 aaPredicted RBP1.11□□□□□ -2.23
LRCH3-211ENST00000466054 OR8D2Q9GZM6 311 aa1.11□□□□□ -2.23
LRCH3-211ENST00000466054 PAQR5Q9NXK6 330 aaPredicted RBP1.11□□□□□ -2.23
LRCH3-211ENST00000466054 FUT9Q9Y231 359 aa1.11□□□□□ -2.23
LRCH3-211ENST00000466054 C9orf84Q5VXU9 1444 aa1.11□□□□□ -2.23
LRCH3-211ENST00000466054 EIF4G1Q04637 1599 aaKnown RBP1.11□□□□□ -2.23
LRCH3-211ENST00000466054 BRWD1Q9NSI6 2320 aa1.11□□□□□ -2.23
LRCH3-211ENST00000466054 COL6A6A6NMZ7 2263 aa1.1□□□□□ -2.23
LRCH3-211ENST00000466054 MAP3K5Q99683 1374 aa1.1□□□□□ -2.23
LRCH3-211ENST00000466054 IRGMA1A4Y4 181 aa1.1□□□□□ -2.23
LRCH3-211ENST00000466054 SDCBPO00560 298 aaPredicted RBP1.1□□□□□ -2.23
LRCH3-211ENST00000466054 IGHV3-7P01780 117 aa1.1□□□□□ -2.23
LRCH3-211ENST00000466054 METTL15P1P0C7V9 234 aa1.1□□□□□ -2.23
LRCH3-211ENST00000466054 FAM228BP0C875 321 aa1.1□□□□□ -2.23
LRCH3-211ENST00000466054 RPS12P25398 132 aaKnown RBP1.1□□□□□ -2.23
LRCH3-211ENST00000466054 REG1BP48304 166 aa1.1□□□□□ -2.23
LRCH3-211ENST00000466054 RAB5BP61020 215 aa1.1□□□□□ -2.23
LRCH3-211ENST00000466054 RPL18Q07020 188 aaKnown RBP1.1□□□□□ -2.23
LRCH3-211ENST00000466054 CD200R1LQ6Q8B3 271 aa1.1□□□□□ -2.23
LRCH3-211ENST00000466054 GID4Q8IVV7 300 aa1.1□□□□□ -2.23
LRCH3-211ENST00000466054 CNBD2Q96M20 576 aa1.1□□□□□ -2.23
LRCH3-211ENST00000466054 LHFPL6Q9Y693 200 aa1.1□□□□□ -2.23
LRCH3-211ENST00000466054 MYOFQ9NZM1 2061 aa1.09□□□□□ -2.23
LRCH3-211ENST00000466054 BAZ2BQ9UIF8 2168 aaKnown RBP1.09□□□□□ -2.23
LRCH3-211ENST00000466054 EVPLLA8MZ36 301 aa1.09□□□□□ -2.23
LRCH3-211ENST00000466054 ISG15P05161 165 aa1.09□□□□□ -2.23
LRCH3-211ENST00000466054 KRT7P08729 469 aa1.09□□□□□ -2.23
LRCH3-211ENST00000466054 AP2S1P53680 142 aaPredicted RBP1.09□□□□□ -2.23
LRCH3-211ENST00000466054 CDK5R1Q15078 307 aa1.09□□□□□ -2.23
LRCH3-211ENST00000466054 Q8N2B8 174 aa1.09□□□□□ -2.23
LRCH3-211ENST00000466054 OPTNQ96CV9 577 aa1.09□□□□□ -2.23
LRCH3-211ENST00000466054 IL36BQ9NZH7 164 aa1.09□□□□□ -2.23
LRCH3-211ENST00000466054 TONSLQ96HA7 1378 aa1.08□□□□□ -2.24
LRCH3-211ENST00000466054 GLI3P10071 1580 aa1.08□□□□□ -2.24
LRCH3-211ENST00000466054 HEATR5BQ9P2D3 2071 aa1.08□□□□□ -2.24
LRCH3-211ENST00000466054 GGT3PA6NGU5 568 aa1.08□□□□□ -2.24
LRCH3-211ENST00000466054 DCTN3O75935 186 aa1.08□□□□□ -2.24
LRCH3-211ENST00000466054 MAGOHP61326 146 aaKnown RBP1.08□□□□□ -2.24
LRCH3-211ENST00000466054 COQ5Q5HYK3 327 aa1.08□□□□□ -2.24
LRCH3-211ENST00000466054 IBA57Q5T440 356 aaKnown RBP1.08□□□□□ -2.24
LRCH3-211ENST00000466054 SFXN4Q6P4A7 337 aa1.08□□□□□ -2.24
LRCH3-211ENST00000466054 C10orf67Q8IYJ2 551 aa1.08□□□□□ -2.24
LRCH3-211ENST00000466054 EFCAB1Q9HAE3 211 aa1.08□□□□□ -2.24
LRCH3-211ENST00000466054 BAIAP2Q9UQB8 552 aa1.08□□□□□ -2.24
LRCH3-211ENST00000466054 MAST2Q6P0Q8 1798 aa1.08□□□□□ -2.24
LRCH3-211ENST00000466054 AHNAK2Q8IVF2 5795 aa1.08□□□□□ -2.24
LRCH3-211ENST00000466054 HEATR5AQ86XA9 2040 aa1.08□□□□□ -2.24
LRCH3-211ENST00000466054 KIF24Q5T7B8 1368 aa1.08□□□□□ -2.24
LRCH3-211ENST00000466054 RALGAPA2Q2PPJ7 1873 aa1.07□□□□□ -2.24
LRCH3-211ENST00000466054 INTS1Q8N201 2190 aaKnown RBP1.07□□□□□ -2.24
LRCH3-211ENST00000466054 FABP5P3A8MUU1 101 aa1.07□□□□□ -2.24
LRCH3-211ENST00000466054 PRM2P04554 102 aa1.07□□□□□ -2.24
LRCH3-211ENST00000466054 OR5G3P0C626 314 aa1.07□□□□□ -2.24
LRCH3-211ENST00000466054 ZNF80P51504 273 aaPredicted RBP1.07□□□□□ -2.24
LRCH3-211ENST00000466054 CCL20P78556 96 aa1.07□□□□□ -2.24
LRCH3-211ENST00000466054 COTL1Q14019 142 aa1.07□□□□□ -2.24
LRCH3-211ENST00000466054 SYPL2Q5VXT5 272 aa1.07□□□□□ -2.24
LRCH3-211ENST00000466054 C11orf40Q8WZ69 217 aa1.07□□□□□ -2.24
LRCH3-211ENST00000466054 YIPF3Q9GZM5 350 aa1.07□□□□□ -2.24
LRCH3-211ENST00000466054 OR51I1Q9H343 314 aa1.07□□□□□ -2.24
LRCH3-211ENST00000466054 LSM5Q9Y4Y9 91 aaKnown RBP1.07□□□□□ -2.24
LRCH3-211ENST00000466054 EVC2Q86UK5 1308 aa1.07□□□□□ -2.24
LRCH3-211ENST00000466054 STRCQ7RTU9 1775 aa1.06□□□□□ -2.24
LRCH3-211ENST00000466054 PMP2P02689 132 aa1.06□□□□□ -2.24
LRCH3-211ENST00000466054 PLCXD2Q0VAA5 305 aa1.06□□□□□ -2.24
LRCH3-211ENST00000466054 ZNF345Q14585 488 aa1.06□□□□□ -2.24
LRCH3-211ENST00000466054 GRK1Q15835 563 aa1.06□□□□□ -2.24
LRCH3-211ENST00000466054 XPNPEP1Q9NQW7 623 aa1.06□□□□□ -2.24
LRCH3-211ENST00000466054 SETD5Q9C0A6 1442 aa1.06□□□□□ -2.24
LRCH3-211ENST00000466054 DLG5Q8TDM6 1919 aa1.05□□□□□ -2.24
LRCH3-211ENST00000466054 TRBV20OR9-2A0A075B6H5 130 aa1.05□□□□□ -2.24
LRCH3-211ENST00000466054 SUPT4H1P63272 117 aaKnown RBP1.05□□□□□ -2.24
LRCH3-211ENST00000466054 IFITM2Q01629 132 aa1.05□□□□□ -2.24
LRCH3-211ENST00000466054 STX5Q13190 355 aa1.05□□□□□ -2.24
LRCH3-211ENST00000466054 PMAIP1Q13794 54 aa1.05□□□□□ -2.24
LRCH3-211ENST00000466054 SURF2Q15527 256 aaPredicted RBP1.05□□□□□ -2.24
LRCH3-211ENST00000466054 GUK1Q16774 197 aa1.05□□□□□ -2.24
LRCH3-211ENST00000466054 C10orf55Q5SWW7 151 aa1.05□□□□□ -2.24
LRCH3-211ENST00000466054 C1orf158Q8N1D5 194 aa1.05□□□□□ -2.24
LRCH3-211ENST00000466054 C15orf53Q8NAA6 179 aa1.05□□□□□ -2.24
LRCH3-211ENST00000466054 ZNF439Q8NDP4 499 aa1.05□□□□□ -2.24
LRCH3-211ENST00000466054 OR5B17Q8NGF7 314 aa1.05□□□□□ -2.24
LRCH3-211ENST00000466054 RASSF5Q8WWW0 418 aa1.05□□□□□ -2.24
LRCH3-211ENST00000466054 PTH2Q96A98 100 aa1.05□□□□□ -2.24
LRCH3-211ENST00000466054 IGKV2D-26A0A0A0MRZ7 120 aa1.04□□□□□ -2.24
LRCH3-211ENST00000466054 A0A0J9YY10 115 aa1.04□□□□□ -2.24
LRCH3-211ENST00000466054 A0A1B0GX78 115 aa1.04□□□□□ -2.24
LRCH3-211ENST00000466054 INMT-MINDY4F8WBC2 141 aa1.04□□□□□ -2.24
LRCH3-211ENST00000466054 RPS4Y1P22090 263 aaKnown RBP1.04□□□□□ -2.24
LRCH3-211ENST00000466054 TCL1AP56279 114 aa1.04□□□□□ -2.24
LRCH3-211ENST00000466054 HIST3H3Q16695 136 aa1.04□□□□□ -2.24
LRCH3-211ENST00000466054 Q6ZS49 121 aa1.04□□□□□ -2.24
LRCH3-211ENST00000466054 C12orf29Q8N999 325 aa1.04□□□□□ -2.24
LRCH3-211ENST00000466054 MRPS26Q9BYN8 205 aaKnown RBP1.04□□□□□ -2.24
LRCH3-211ENST00000466054 WDR61Q9GZS3 305 aaKnown RBP1.04□□□□□ -2.24
LRCH3-211ENST00000466054 CISHQ9NSE2 258 aa1.04□□□□□ -2.24
LRCH3-211ENST00000466054 FUOMA2VDF0 154 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms