RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CCL25O15444 150 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 OR5G3P0C626 314 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 IGLC2P0DOY2 106 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 IGLC3P0DOY3 106 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 HINT1P49773 126 aaPredicted RBP10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 GNG4P50150 75 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 FAM168AQ92567 244 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 GCM1Q9NP62 436 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 SERTAD4Q9NUC0 356 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 KMT2EQ8IZD2 1858 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 TRIOBPQ9H2D6 2365 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 BMPR1BO00238 502 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 MPDU1O75352 247 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 FABP6P51161 128 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 MLANAQ16655 118 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 DCAF12Q5T6F0 453 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 C6orf15Q6UXA7 325 aaPredicted RBP10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 NIT1Q86X76 327 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 CD177Q8N6Q3 437 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 OR4B1Q8NGF8 309 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 RNASE8Q8TDE3 154 aaKnown RBP10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 LINC00479Q96M42 142 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 SSBP3Q9BWW4 388 aaPredicted RBP10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 NPVFQ9HCQ7 196 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 TMEM140Q9NV12 185 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 TCF19Q9Y242 345 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 LAMA5O15230 3695 aa10.38□□□□□ -0.75
CLCNKA-204ENST00000464764 TRGV10A0A0A0MS01 117 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 C15orf65H3BRN8 121 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 SP1P08047 785 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 MGST1P10620 155 aaKnown RBP10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 UNQ5815/PRO19632Q6UWF5 114 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 WDR82Q6UXN9 313 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 GNB1LQ9BYB4 327 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 SLC45A2Q9UMX9 530 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 SIT1Q9Y3P8 196 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 CACNA1GO43497 2377 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 RHOBP62745 196 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 PMS2CLQ68D20 193 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 ETFRF1Q6IPR1 90 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 DPRXA6NFQ7 191 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 CX3CL1P78423 397 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 ARG2P78540 354 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 TEPPQ6URK8 271 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 GMPPAQ96IJ6 420 aaPredicted RBP10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 TXNDC17Q9BRA2 123 aa10.37□□□□□ -0.75
CLCNKA-204ENST00000464764 CA2P00918 260 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 PTPRBP23467 1997 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 HNRNPA3P51991 378 aaKnown RBP10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 PTTG1IPP53801 180 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 ALKBH2Q6NS38 261 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 FAM214BQ7L5A3 538 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 MRPL52Q86TS9 123 aaKnown RBP10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 TSKUQ8WUA8 353 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 ZNF503Q96F45 646 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 KCNS1Q96KK3 526 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 IGHV3OR15-7A0A075B7D8 119 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 SPINT2O43291 252 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 ZNF324O75467 553 aaPredicted RBP10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 TDGF1P13385 188 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 SLAQ13239 276 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 LPAL2Q16609 132 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 MORN2Q502X0 79 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 NANOS1Q8WY41 292 aaKnown RBP10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 C11orf52Q96A22 123 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 UQCR10Q9UDW1 63 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 CDC42EP3Q9UKI2 254 aa10.36□□□□□ -0.75
CLCNKA-204ENST00000464764 IQCF6A8MYZ5 107 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 C9JCJ5 164 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 CRYABP02511 175 aaKnown RBP10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 LINC00869P0C866 280 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 IGHV1-2P23083 117 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 MEOX1P50221 254 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 TMPRSS3P57727 454 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 RPP30P78346 268 aaKnown RBP10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 RNFT1Q5M7Z0 435 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 CLEC7AQ9BXN2 247 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 RNF24Q9Y225 148 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 GGTLC3B5MD39 225 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 OR7C2O60412 319 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 ERVK-16P61578 105 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 IGKV1OR2-108A0A075B7D4 117 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 NPY1RP25929 384 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 GPR6P46095 362 aaPredicted RBP10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 PRRX1P54821 245 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 TCTEX1D1Q8N7M0 179 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 ZNRF1Q8ND25 227 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 S1PR3Q99500 378 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 SELENOKQ9Y6D0 94 aa10.35□□□□□ -0.75
CLCNKA-204ENST00000464764 TRAV9-1A0A075B6T8 112 aa10.34□□□□□ -0.75
CLCNKA-204ENST00000464764 LOC102724200A0A096LPH7 203 aaPredicted RBP10.34□□□□□ -0.75
CLCNKA-204ENST00000464764 C20orf202A1L168 122 aa10.34□□□□□ -0.75
CLCNKA-204ENST00000464764 IGLV2-8P01709 118 aa10.34□□□□□ -0.75
CLCNKA-204ENST00000464764 MRPL49Q13405 166 aaKnown RBP10.34□□□□□ -0.75
CLCNKA-204ENST00000464764 SPRR3Q9UBC9 169 aa10.34□□□□□ -0.75
CLCNKA-204ENST00000464764 DUSP13Q9UII6 198 aa10.34□□□□□ -0.75
CLCNKA-204ENST00000464764 WDR31Q8NA23 367 aa10.34□□□□□ -0.75
CLCNKA-204ENST00000464764 SLC24A4Q8NFF2 622 aa10.34□□□□□ -0.75
CLCNKA-204ENST00000464764 NABP2Q9BQ15 211 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms