RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 BET1LQ9NYM9 111 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 TECRQ9NZ01 308 aaKnown RBP6.02□□□□□ -1.45
USP48-206ENST00000464577 FOXA2Q9Y261 457 aaPredicted RBP6.02□□□□□ -1.45
USP48-206ENST00000464577 COX11Q9Y6N1 276 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 R4GN57 208 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 CACNA1EQ15878 2313 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 BRWD1Q9NSI6 2320 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 ARHGAP21Q5T5U3 1957 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 M0R1X1 148 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 CCL25O15444 150 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 IGLV2-8P01709 118 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 CELA3BP08861 270 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 CRYBB3P26998 211 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 PPOXP50336 477 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 PTTG1IPP53801 180 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 RBX1P62877 108 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 KLF5Q13887 457 aaPredicted RBP6.01□□□□□ -1.45
USP48-206ENST00000464577 PSG5Q15238 335 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 SAPCD1Q5SSQ6 148 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 ABHD17BQ5VST6 288 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 PMS2CLQ68D20 193 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 WDR82Q6UXN9 313 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 MED12LQ86YW9 2145 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 OR4S2Q8NH73 311 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 DDB2Q92466 427 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 S1PR3Q99500 378 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 C19orf24Q9BVV8 132 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 RNASE7Q9H1E1 156 aaKnown RBP6.01□□□□□ -1.45
USP48-206ENST00000464577 ZNF576Q9H609 170 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 C12orf49Q9H741 205 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 OBP2BQ9NPH6 170 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 ABI3Q9P2A4 366 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 USP34Q70CQ2 3546 aa6.01□□□□□ -1.45
USP48-206ENST00000464577 TRAV9-2A0A087WT02 112 aa6□□□□□ -1.45
USP48-206ENST00000464577 TRAV3A0A0B4J244 114 aa6□□□□□ -1.45
USP48-206ENST00000464577 IGHV1-69-2A0A0G2JMI3 117 aa6□□□□□ -1.45
USP48-206ENST00000464577 A0A1W2PRE2 83 aa6□□□□□ -1.45
USP48-206ENST00000464577 DEFB108AA8MXU0 73 aa6□□□□□ -1.45
USP48-206ENST00000464577 IGFBP2P18065 325 aa6□□□□□ -1.45
USP48-206ENST00000464577 TAS2R45P59539 299 aa6□□□□□ -1.45
USP48-206ENST00000464577 HSPE1P61604 102 aaKnown RBP6□□□□□ -1.45
USP48-206ENST00000464577 TBR1Q16650 682 aa6□□□□□ -1.45
USP48-206ENST00000464577 CR1LQ2VPA4 569 aa6□□□□□ -1.45
USP48-206ENST00000464577 KIAA1644Q3SXP7 199 aa6□□□□□ -1.45
USP48-206ENST00000464577 IBA57Q5T440 356 aaKnown RBP6□□□□□ -1.45
USP48-206ENST00000464577 ZNF826PQ6ZT77 177 aa6□□□□□ -1.45
USP48-206ENST00000464577 VASH2Q86V25 355 aa6□□□□□ -1.45
USP48-206ENST00000464577 DOLPP1Q86YN1 238 aa6□□□□□ -1.45
USP48-206ENST00000464577 ZNF738Q8NE65 137 aa6□□□□□ -1.45
USP48-206ENST00000464577 RFESDQ8TAC1 157 aa6□□□□□ -1.45
USP48-206ENST00000464577 C18orf32Q8TCD1 76 aa6□□□□□ -1.45
USP48-206ENST00000464577 C22orf15Q8WYQ4 148 aa6□□□□□ -1.45
USP48-206ENST00000464577 HES7Q9BYE0 225 aa6□□□□□ -1.45
USP48-206ENST00000464577 ENY2Q9NPA8 101 aa6□□□□□ -1.45
USP48-206ENST00000464577 TMEM14BQ9NUH8 114 aa6□□□□□ -1.45
USP48-206ENST00000464577 FREM1Q5H8C1 2179 aa6□□□□□ -1.45
USP48-206ENST00000464577 IGHV3-64DA0A0J9YX35 117 aa6□□□□□ -1.45
USP48-206ENST00000464577 GGTLC3B5MD39 225 aa6□□□□□ -1.45
USP48-206ENST00000464577 F2RL2O00254 374 aa6□□□□□ -1.45
USP48-206ENST00000464577 USF1P22415 310 aaPredicted RBP6□□□□□ -1.45
USP48-206ENST00000464577 MPV17P39210 176 aa6□□□□□ -1.45
USP48-206ENST00000464577 CDKN1BP46527 198 aa6□□□□□ -1.45
USP48-206ENST00000464577 GNG10P50151 68 aa6□□□□□ -1.45
USP48-206ENST00000464577 ATP5IP56385 69 aaPredicted RBP6□□□□□ -1.45
USP48-206ENST00000464577 FXYD3Q14802 87 aa6□□□□□ -1.45
USP48-206ENST00000464577 C3AR1Q16581 482 aa6□□□□□ -1.45
USP48-206ENST00000464577 MRPL54Q6P161 138 aaKnown RBP6□□□□□ -1.45
USP48-206ENST00000464577 INO80CQ6PI98 192 aaPredicted RBP6□□□□□ -1.45
USP48-206ENST00000464577 FAM231DQ6ZW35 169 aa6□□□□□ -1.45
USP48-206ENST00000464577 ZNF436-AS1Q8NC38 126 aaPredicted RBP6□□□□□ -1.45
USP48-206ENST00000464577 OR8B3Q8NGG8 313 aa6□□□□□ -1.45
USP48-206ENST00000464577 KLF14Q8TD94 323 aaPredicted RBP6□□□□□ -1.45
USP48-206ENST00000464577 RNASE8Q8TDE3 154 aaKnown RBP6□□□□□ -1.45
USP48-206ENST00000464577 MBD6Q96DN6 1003 aa6□□□□□ -1.45
USP48-206ENST00000464577 ZNF503Q96F45 646 aa6□□□□□ -1.45
USP48-206ENST00000464577 OR8B2Q96RD0 313 aa6□□□□□ -1.45
USP48-206ENST00000464577 NABP2Q9BQ15 211 aa6□□□□□ -1.45
USP48-206ENST00000464577 CLEC7AQ9BXN2 247 aa6□□□□□ -1.45
USP48-206ENST00000464577 IFI27L2Q9H2X8 130 aa6□□□□□ -1.45
USP48-206ENST00000464577 ZNF331Q9NQX6 463 aaPredicted RBP6□□□□□ -1.45
USP48-206ENST00000464577 TUBG2Q9NRH3 451 aa6□□□□□ -1.45
USP48-206ENST00000464577 GNG12Q9UBI6 72 aa6□□□□□ -1.45
USP48-206ENST00000464577 PPIAL4AQ9Y536 164 aa6□□□□□ -1.45
USP48-206ENST00000464577 DOCK11Q5JSL3 2073 aa6□□□□□ -1.45
USP48-206ENST00000464577 IGHV2OR16-5A0A0B4J2B6 119 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 IGLC7A0M8Q6 106 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 FAM181BA6NEQ2 426 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 H0YJW9 148 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 SPINK4O60575 86 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 OR2J3O76001 311 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 TCL1AP56279 114 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 POU2AF1Q16633 256 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 FAM214BQ7L5A3 538 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 CXorf67Q86X51 503 aaPredicted RBP5.99□□□□□ -1.45
USP48-206ENST00000464577 VKORC1L1Q8N0U8 176 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 MUC15Q8N387 334 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 CD177Q8N6Q3 437 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 TPRX1Q8N7U7 411 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 ZPBPQ9BS86 351 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 MRPL32Q9BYC8 188 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms