RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 OR2H2O95918 312 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 GABRG2P18507 467 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 DUSP3P51452 185 aaPredicted RBP3.23□□□□□ -1.89
CCNL1-204ENST00000464316 RPL8P62917 257 aaKnown RBP3.23□□□□□ -1.89
CCNL1-204ENST00000464316 UBE2L3P68036 154 aaKnown RBP3.23□□□□□ -1.89
CCNL1-204ENST00000464316 OR1C1Q15619 314 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 RSPO4Q2I0M5 234 aaPredicted RBP3.23□□□□□ -1.89
CCNL1-204ENST00000464316 SPINK9Q5DT21 86 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 TIMM23BQ5SRD1 257 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 EBLN2Q6P2I7 272 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 RTTNQ86VV8 2226 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 C5orf17Q8NAS9 161 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 TSTD1Q8NFU3 115 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 OR1N2Q8NGR9 330 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 PRSS3P2Q8NHM4 247 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 AMMECR1Q9Y4X0 333 aaPredicted RBP3.23□□□□□ -1.89
CCNL1-204ENST00000464316 A0A0G2JMM0 328 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 A0A1W2PPB8 328 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 KIR3DP1A8MWS1 328 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 ZIC3O60481 467 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 IGHV4-34P06331 123 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 FTH1P19P0C7X4 201 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 SMIM13P0DJ93 91 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 COX8AP10176 69 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 ANOS1P23352 680 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 CD27P26842 260 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 SSTR5P35346 364 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 PTGDSP41222 190 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 MZT1Q08AG7 82 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 LYSMD4Q5XG99 296 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 SLC35E4Q6ICL7 350 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 SLC23A3Q6PIS1 610 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 COLCA1Q6ZS62 124 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 DPF1Q92782 380 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 POM121L2Q96KW2 1035 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 ATP6V0BQ99437 205 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 MGST2Q99735 147 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 NABP2Q9BQ15 211 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 ZNF355PQ9NSJ1 428 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 DEPPQ9NTK1 212 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 WNT16Q9UBV4 365 aa3.23□□□□□ -1.89
CCNL1-204ENST00000464316 ARHGEF17Q96PE2 2063 aaPredicted RBP3.23□□□□□ -1.89
CCNL1-204ENST00000464316 DOCK11Q5JSL3 2073 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 C2orf70A6NJV1 201 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 C17orf98A8MV24 154 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 C5orf67F2Z3F1 127 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 CRXO43186 299 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-204ENST00000464316 P01737 135 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 DEFA4P12838 97 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 SUB1P53999 127 aaKnown RBP eCLIP3.22□□□□□ -1.89
CCNL1-204ENST00000464316 HSPE1P61604 102 aaKnown RBP3.22□□□□□ -1.89
CCNL1-204ENST00000464316 KRTAP27-1Q3LI81 207 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 WIPI1Q5MNZ9 446 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-204ENST00000464316 Q6ZPA2 131 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 UBALD1Q8TB05 177 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 ZNF837Q96EG3 531 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-204ENST00000464316 HES4Q9HCC6 221 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 MBNL3Q9NUK0 354 aaKnown RBP3.22□□□□□ -1.89
CCNL1-204ENST00000464316 AP5S1Q9NUS5 200 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 PSG11Q9UQ72 335 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 A0A087X0K7 114 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 TRAV8-6A0A0B4J262 113 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 hDV102S1A0JD36 115 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 SIVA1O15304 175 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 COX7A2P2O60397 106 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 CEACAM3P40198 252 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 UQCRFS1P47985 274 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 PSG7Q13046 419 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 SLAQ13239 276 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 RIGQ13278 110 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 CD300EQ496F6 205 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-204ENST00000464316 C20orf204Q6ZNR8 217 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 NHLRC2Q8NBF2 726 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 OR2Z1Q8NG97 314 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 OR10D3Q8NH80 312 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 ZNF488Q96MN9 340 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 CLEC5AQ9NY25 188 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 B4GALT7Q9UBV7 327 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 PRNDQ9UKY0 176 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 TCF19Q9Y242 345 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 PSMB11A5LHX3 300 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 PRSS47A8MTI9 375 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 HIGD1CA8MV81 97 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 J3QW42 95 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 SAP30O75446 220 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 OR9G9P0C7N8 305 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 NTF4P34130 210 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 GPR6P46095 362 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-204ENST00000464316 ZXDAP98168 799 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 SMAGPQ0VAQ4 97 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 TMEM92Q6UXU6 159 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 ABHD12Q8N2K0 398 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 NUP35Q8NFH5 326 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 H1FXQ92522 213 aaKnown RBP3.22□□□□□ -1.89
CCNL1-204ENST00000464316 SSBP3Q9BWW4 388 aaPredicted RBP3.22□□□□□ -1.89
CCNL1-204ENST00000464316 LINC00470Q9BZP3 86 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 CRIM1Q9NZV1 1036 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 RP1P56715 2156 aa3.22□□□□□ -1.89
CCNL1-204ENST00000464316 TRGV8A0A0C4DH27 118 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 A0A1B0GW15 77 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms