RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 CACNG8Q8WXS5 425 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 YIPF6Q96EC8 236 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 ATP6V0BQ99437 205 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 ZNF2Q9BSG1 426 aaPredicted RBP10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 SRD5A3Q9H8P0 318 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 VCX3AQ9NNX9 186 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 MLXQ9UH92 298 aa10.79□□□□□ -0.68
SNRNP40-203ENST00000463988 MARCH11A6NNE9 402 aa10.78□□□□□ -0.68
SNRNP40-203ENST00000463988 SERPINE2P07093 398 aa10.78□□□□□ -0.68
SNRNP40-203ENST00000463988 TRAPPC2P0DI81 140 aa10.78□□□□□ -0.68
SNRNP40-203ENST00000463988 TRAPPC2BP0DI82 140 aa10.78□□□□□ -0.68
SNRNP40-203ENST00000463988 PRSS3P35030 304 aa10.78□□□□□ -0.68
SNRNP40-203ENST00000463988 CMTM1Q8IZ96 169 aa10.78□□□□□ -0.68
SNRNP40-203ENST00000463988 OR1L8Q8NGR8 309 aa10.78□□□□□ -0.68
SNRNP40-203ENST00000463988 OR5H2Q8NGV7 314 aa10.78□□□□□ -0.68
SNRNP40-203ENST00000463988 DGCR14Q96DF8 476 aaKnown RBP10.78□□□□□ -0.68
SNRNP40-203ENST00000463988 ZNF436Q9C0F3 470 aaPredicted RBP10.78□□□□□ -0.68
SNRNP40-203ENST00000463988 NDUFA4L2Q9NRX3 87 aa10.78□□□□□ -0.68
SNRNP40-203ENST00000463988 MRPL27Q9P0M9 148 aaKnown RBP10.78□□□□□ -0.68
SNRNP40-203ENST00000463988 UFC1Q9Y3C8 167 aa10.78□□□□□ -0.68
SNRNP40-203ENST00000463988 LYSTQ99698 3801 aa10.78□□□□□ -0.68
SNRNP40-203ENST00000463988 A0A087WXM4 84 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 TEX50A0A1B0GTY4 177 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 PMP2P02689 132 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 RLN1P04808 185 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 OR13C7P0DN81 318 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 GPR183P32249 361 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 TGFBR1P36897 503 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 WT1-ASQ06250 92 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 TM4SF20Q53R12 229 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 PLET1Q6UQ28 207 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 UNQ9165/PRO28630Q6UXU0 137 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 OR10W1Q8NGF6 305 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 OR52B4Q8NGK2 314 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 OR6F1Q8NGZ6 308 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 WFDC10AQ9H1F0 79 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 RETNQ9HD89 108 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 FAM212BQ9NTI7 297 aaPredicted RBP10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 DNAH1Q9P2D7 4330 aa10.77□□□□□ -0.69
SNRNP40-203ENST00000463988 GPR31O00270 319 aa10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 TGOLN2O43493 480 aa10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 LPAR6P43657 344 aa10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 ZNF585BQ52M93 769 aa10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 LPCAT3Q6P1A2 487 aa10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 SPSB3Q6PJ21 355 aa10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 BTNL8Q6UX41 500 aa10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 LYSMD2Q8IV50 215 aa10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 TSPAN14Q8NG11 270 aa10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 OR1L6Q8NGR2 347 aa10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 FCAMRQ8WWV6 532 aa10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 LSM10Q969L4 123 aaKnown RBP10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 SLC25A46Q96AG3 418 aa10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 BSCL2Q96G97 398 aaPredicted RBP10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 CMTM3Q96MX0 182 aa10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 C5orf66Q9H5L9 145 aa10.76□□□□□ -0.69
SNRNP40-203ENST00000463988 SNAPC5O75971 98 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 TNFAIP8O95379 198 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 KRASP01116 189 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 RPA2P15927 270 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 LSM3P62310 102 aaKnown RBP10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 SLC25A24Q6NUK1 477 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 RBPMS2Q6ZRY4 209 aaKnown RBP10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 OR5B3Q8NH48 314 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 GPX8Q8TED1 209 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 TMEM190Q8WZ59 177 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 TSC22D3Q99576 134 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 FAM110AQ9BQ89 295 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 FXYD6Q9H0Q3 95 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 SCPEP1Q9HB40 452 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 FKBP11Q9NYL4 201 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 PRNDQ9UKY0 176 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 OR51B2Q9Y5P1 312 aa10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 F11RQ9Y624 299 aaKnown RBP10.75□□□□□ -0.69
SNRNP40-203ENST00000463988 SMIM31A0A1B0GVY4 71 aa10.74□□□□□ -0.69
SNRNP40-203ENST00000463988 SCAF4O95104 1147 aaKnown RBP10.74□□□□□ -0.69
SNRNP40-203ENST00000463988 APOA1P02647 267 aa10.74□□□□□ -0.69
SNRNP40-203ENST00000463988 S100GP29377 79 aa10.74□□□□□ -0.69
SNRNP40-203ENST00000463988 HRH1P35367 487 aa10.74□□□□□ -0.69
SNRNP40-203ENST00000463988 TMEM56Q96MV1 263 aa10.74□□□□□ -0.69
SNRNP40-203ENST00000463988 GGTLC1Q9BX51 225 aa10.74□□□□□ -0.69
SNRNP40-203ENST00000463988 DAZ1Q9NQZ3 744 aaKnown RBP10.74□□□□□ -0.69
SNRNP40-203ENST00000463988 TMEM14BQ9NUH8 114 aa10.74□□□□□ -0.69
SNRNP40-203ENST00000463988 GAR1Q9NY12 217 aaKnown RBP10.74□□□□□ -0.69
SNRNP40-203ENST00000463988 C21orf62Q9NYP8 219 aa10.74□□□□□ -0.69
SNRNP40-203ENST00000463988 LOC102724200A0A096LPH7 203 aaPredicted RBP10.73□□□□□ -0.69
SNRNP40-203ENST00000463988 OR2T8A6NH00 312 aa10.73□□□□□ -0.69
SNRNP40-203ENST00000463988 NDUFA4O00483 81 aa10.73□□□□□ -0.69
SNRNP40-203ENST00000463988 TSPAN4O14817 238 aa10.73□□□□□ -0.69
SNRNP40-203ENST00000463988 EIF4EP06730 217 aaKnown RBP10.73□□□□□ -0.69
SNRNP40-203ENST00000463988 HLA-DMAP28067 261 aa10.73□□□□□ -0.69
SNRNP40-203ENST00000463988 G6PCP35575 357 aa10.73□□□□□ -0.69
SNRNP40-203ENST00000463988 MFAP2P55001 183 aa10.73□□□□□ -0.69
SNRNP40-203ENST00000463988 SLC38A6Q8IZM9 456 aa10.73□□□□□ -0.69
SNRNP40-203ENST00000463988 OR2C3Q8N628 320 aa10.73□□□□□ -0.69
SNRNP40-203ENST00000463988 SCARB1Q8WTV0 552 aa10.73□□□□□ -0.69
SNRNP40-203ENST00000463988 SPAG8Q99932 426 aaPredicted RBP10.73□□□□□ -0.69
SNRNP40-203ENST00000463988 HINT2Q9BX68 163 aa10.73□□□□□ -0.69
SNRNP40-203ENST00000463988 SELENOKQ9Y6D0 94 aa10.73□□□□□ -0.69
SNRNP40-203ENST00000463988 IGHV3-35A0A0C4DH35 117 aa10.72□□□□□ -0.69
SNRNP40-203ENST00000463988 K7EMT4 169 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms