RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 VMO1Q7Z5L0 202 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 CLDND2Q8NHS1 167 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 NPFFO15130 113 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 ZNF324O75467 553 aaPredicted RBP10.73□□□□□ -0.69
NUP58-206ENST00000463407 OR1N2Q8NGR9 330 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 MIEN1Q9BRT3 115 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 EFNA2O43921 213 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 SPTBP11277 2137 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 MDKP21741 143 aaPredicted RBP10.73□□□□□ -0.69
NUP58-206ENST00000463407 CLPSP04118 112 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 IL6RP08887 468 aaPredicted RBP10.73□□□□□ -0.69
NUP58-206ENST00000463407 FAM3BP58499 235 aaPredicted RBP10.73□□□□□ -0.69
NUP58-206ENST00000463407 DHRS11Q6UWP2 260 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 SLC25A28Q96A46 364 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 RLFQ13129 1914 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 FNDC1Q4ZHG4 1894 aaPredicted RBP10.73□□□□□ -0.69
NUP58-206ENST00000463407 CEACAM4O75871 244 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 RND3P61587 244 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 OR4C46A6NHA9 309 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 NUDT3O95989 172 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 WNT2P09544 360 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 MST1P26927 711 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 ICAM4Q14773 271 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 SPSB4Q96A44 273 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 SAA1P0DJI8 122 aaPredicted RBP10.72□□□□□ -0.69
NUP58-206ENST00000463407 LINC01587Q99440 93 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 RTBDNQ9BSG5 229 aaPredicted RBP10.72□□□□□ -0.69
NUP58-206ENST00000463407 PLSCR2Q9NRY7 297 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 ZNF343Q6P1L6 599 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 ZNF502Q8TBZ5 544 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 CRIM1Q9NZV1 1036 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 MOB4Q9Y3A3 225 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 SLC25A15Q9Y619 301 aa10.72□□□□□ -0.69
NUP58-206ENST00000463407 CBY3A6NI87 242 aa10.71□□□□□ -0.69
NUP58-206ENST00000463407 YPEL1O60688 119 aa10.71□□□□□ -0.69
NUP58-206ENST00000463407 NPIPB7O75200 414 aa10.71□□□□□ -0.69
NUP58-206ENST00000463407 PRR30Q53SZ7 412 aaPredicted RBP10.71□□□□□ -0.69
NUP58-206ENST00000463407 STHQ8IWL8 128 aa10.71□□□□□ -0.69
NUP58-206ENST00000463407 TEX45Q8NA69 505 aa10.71□□□□□ -0.69
NUP58-206ENST00000463407 OR4C5Q8NGB2 326 aa10.71□□□□□ -0.69
NUP58-206ENST00000463407 YPEL2Q96QA6 119 aa10.71□□□□□ -0.69
NUP58-206ENST00000463407 TBX15Q96SF7 602 aa10.71□□□□□ -0.69
NUP58-206ENST00000463407 C5orf52A6NGY3 159 aa10.71□□□□□ -0.69
NUP58-206ENST00000463407 C2orf83Q53S99 150 aa10.71□□□□□ -0.69
NUP58-206ENST00000463407 RRHO14718 337 aa10.71□□□□□ -0.69
NUP58-206ENST00000463407 NMBP08949 121 aa10.71□□□□□ -0.69
NUP58-206ENST00000463407 TCTAP57738 103 aa10.71□□□□□ -0.69
NUP58-206ENST00000463407 MORN2Q502X0 79 aa10.71□□□□□ -0.69
NUP58-206ENST00000463407 B4DSR2 109 aa10.71□□□□□ -0.7
NUP58-206ENST00000463407 IGFBP2P18065 325 aa10.71□□□□□ -0.7
NUP58-206ENST00000463407 CCL1P22362 96 aa10.71□□□□□ -0.7
NUP58-206ENST00000463407 GCHFRP30047 84 aa10.71□□□□□ -0.7
NUP58-206ENST00000463407 ZNF497Q6ZNH5 498 aa10.71□□□□□ -0.7
NUP58-206ENST00000463407 A0A087WV48 116 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 ERVH48-1M5A8F1 160 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 TIMM23O14925 209 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 DANCRP0C864 163 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 SMUG1Q53HV7 270 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 Q5BKY6 102 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 NPCDR1Q9BY65 106 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 TRGC1P0CF51 173 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 PLXNA3P51805 1871 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 TCF20Q9UGU0 1960 aaKnown RBP10.7□□□□□ -0.7
NUP58-206ENST00000463407 MYOD1P15172 320 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 LDLRAD2Q5SZI1 272 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 PRSS33Q8NF86 280 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 GATAD1Q8WUU5 269 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 VPS25Q9BRG1 176 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 MBD3L4A6NDZ8 208 aaPredicted RBP10.7□□□□□ -0.7
NUP58-206ENST00000463407 MBD3L3A6NE82 208 aaPredicted RBP10.7□□□□□ -0.7
NUP58-206ENST00000463407 MBD3L5A6NJ08 208 aaPredicted RBP10.7□□□□□ -0.7
NUP58-206ENST00000463407 RNASE4P34096 147 aaKnown RBP10.7□□□□□ -0.7
NUP58-206ENST00000463407 OR11H4Q8NGC9 324 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 MBD3L2Q8NHZ7 208 aaPredicted RBP10.7□□□□□ -0.7
NUP58-206ENST00000463407 SIGLEC5O15389 551 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 LYRM7Q5U5X0 104 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 GTF3AQ92664 365 aaKnown RBP10.7□□□□□ -0.7
NUP58-206ENST00000463407 NEU1Q99519 415 aa10.7□□□□□ -0.7
NUP58-206ENST00000463407 GCGP01275 180 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 TFF3Q07654 80 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 PRSS8Q16651 343 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 GTSCR1Q86UQ5 136 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 PAQR4Q8N4S7 273 aaPredicted RBP10.69□□□□□ -0.7
NUP58-206ENST00000463407 MAP1LC3AQ9H492 121 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 BET1LQ9NYM9 111 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 GTF2H5Q6ZYL4 71 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 HLA-DRB1P01911 266 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 KLRD1Q13241 179 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 ZDBF2Q9HCK1 2354 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 IGKV1-9A0A0C4DH69 117 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 PRR32B1ATL7 298 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 SAPCD1Q5SSQ6 148 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 VN1R17PQ8TDU5 208 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 SDHCQ99643 169 aaPredicted RBP10.69□□□□□ -0.7
NUP58-206ENST00000463407 LINC00527Q9UJ94 153 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 VWA8A3KMH1 1905 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 DNAJC13O75165 2243 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 FHITP49789 147 aa10.69□□□□□ -0.7
NUP58-206ENST00000463407 RNASEH2CQ8TDP1 164 aaKnown RBP10.69□□□□□ -0.7
NUP58-206ENST00000463407 FAM131CQ96AQ9 280 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms