RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 SEC22AQ96IW7 307 aa10.07□□□□□ -0.8
R3HDM1-213ENST00000463230 THAP7Q9BT49 309 aaPredicted RBP10.07□□□□□ -0.8
R3HDM1-213ENST00000463230 ALX4Q9H161 411 aaPredicted RBP10.07□□□□□ -0.8
R3HDM1-213ENST00000463230 PEF1Q9UBV8 284 aaKnown RBP10.07□□□□□ -0.8
R3HDM1-213ENST00000463230 V9GYH0 126 aa10.07□□□□□ -0.8
R3HDM1-213ENST00000463230 HMX3A6NHT5 357 aa10.07□□□□□ -0.8
R3HDM1-213ENST00000463230 G6PCP35575 357 aa10.07□□□□□ -0.8
R3HDM1-213ENST00000463230 ZNF45Q02386 682 aa10.07□□□□□ -0.8
R3HDM1-213ENST00000463230 SPANXN2Q5MJ10 180 aa10.07□□□□□ -0.8
R3HDM1-213ENST00000463230 GDPD1Q8N9F7 314 aa10.07□□□□□ -0.8
R3HDM1-213ENST00000463230 DCUN1D4Q92564 292 aa10.07□□□□□ -0.8
R3HDM1-213ENST00000463230 AKIP1Q9NQ31 210 aa10.07□□□□□ -0.8
R3HDM1-213ENST00000463230 AURKAIP1Q9NWT8 199 aaPredicted RBP10.07□□□□□ -0.8
R3HDM1-213ENST00000463230 TRAV3A0A0B4J244 114 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 C3orf85A0A1B0GTC6 90 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 IGLC7A0M8Q6 106 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 CGB1A6NKQ9 187 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 C15orf61A6NNL5 157 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 APELAP0DMC3 54 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 PYDC2Q56P42 97 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 H2BFWTQ7Z2G1 175 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 ZNF429Q86V71 674 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 OR1L6Q8NGR2 347 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 MARCH1Q8TCQ1 289 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 LSM10Q969L4 123 aaKnown RBP10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 TMEM14BQ9NUH8 114 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 TEX50A0A1B0GTY4 177 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 E7EUB6 86 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 AREGP15514 252 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 UCP1P25874 307 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 DHODHQ02127 395 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 EXOSC2Q13868 293 aaKnown RBP10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 Q8N402 240 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 DLX4Q92988 240 aaPredicted RBP10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 TRIM63Q969Q1 353 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 MRGPRFQ96AM1 343 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 TMEM56Q96MV1 263 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 NDUFA4L2Q9NRX3 87 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 THYN1Q9P016 225 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 GPR132Q9UNW8 380 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 OR51B2Q9Y5P1 312 aa10.06□□□□□ -0.8
R3HDM1-213ENST00000463230 IGKV1-39P01597 117 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 IGKV1D-39P04432 117 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 HOXD3P31249 432 aaPredicted RBP10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 SLURP1P55000 103 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 KLF9Q13886 244 aaPredicted RBP10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 TATDN3Q17R31 274 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 OR6Q1Q8NGQ2 317 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 ELOVL1Q9BW60 279 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 FBXL7Q9UJT9 491 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 IGLV11-55A0A075B6I3 123 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 PIGBOS1A0A0B4J2F0 54 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 DEFA4P12838 97 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 PI3P19957 117 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 KLF5Q13887 457 aaPredicted RBP10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 ZNF79Q15937 498 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 C15orf32Q32M92 178 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 ACSM6Q6P461 480 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 FAM219AQ8IW50 185 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 TOMM5Q8N4H5 51 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 OR51S1Q8NGJ8 323 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 OR4A16Q8NH70 328 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 CXorf58Q96LI9 332 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 FANCD2OSQ96PS1 177 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 TP53RKQ96S44 253 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 ATP6V0BQ99437 205 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 RTBDNQ9BSG5 229 aaPredicted RBP10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 NAA60Q9H7X0 242 aa10.05□□□□□ -0.8
R3HDM1-213ENST00000463230 P0C879 139 aa10.04□□□□□ -0.8
R3HDM1-213ENST00000463230 FAAP20Q6NZ36 180 aa10.04□□□□□ -0.8
R3HDM1-213ENST00000463230 EEF1AKMT3Q96AZ1 226 aa10.04□□□□□ -0.8
R3HDM1-213ENST00000463230 TMEM222Q9H0R3 208 aa10.04□□□□□ -0.8
R3HDM1-213ENST00000463230 TRBV7-1A0A0A6YYK4 115 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 ANKRD34BA5PLL1 514 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 CRYM-AS1A6NIL9 109 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 OR2J3O76001 311 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 MYOD1P15172 320 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 KRTAP10-11P60412 298 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 C5orf66Q9H5L9 145 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 CACFD1Q9UGQ2 172 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 TEX13DA0A0J9YY54 714 aaPredicted RBP10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 RBMXL2O75526 392 aaKnown RBP10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 PRH1P02810 166 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 TRIM16LQ309B1 348 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 MRAPQ8TCY5 172 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 VN1R17PQ8TDU5 208 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 IL22RA2Q969J5 263 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 GALNT14Q96FL9 552 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 SRRQ9GZT4 340 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 MCUBQ9NWR8 336 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 SIGLEC8Q9NYZ4 499 aa10.03□□□□□ -0.8
R3HDM1-213ENST00000463230 INS-IGF2F8WCM5 200 aa10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 CDS2O95674 445 aa10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 OR13C7P0DN81 318 aa10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 AKR1C2P52895 323 aa10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 HSPE1P61604 102 aaKnown RBP10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 PRCDQ00LT1 54 aa10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 RPEL1Q2QD12 228 aa10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 SGPP2Q8IWX5 399 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms