RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 RASL11AQ6T310 242 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 SPATA12Q7Z6I5 190 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 DAND5Q8N907 189 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 OR11H1Q8NG94 326 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 OR10P1Q8NGE3 313 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 TEX47Q8TBZ9 253 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 RAB2BQ8WUD1 216 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 RAD51AP1Q96B01 352 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 PHB2Q99623 299 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 FAM96AQ9H5X1 160 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 MRPL40Q9NQ50 206 aaKnown RBP2.13□□□□□ -2.07
USH2A-203ENST00000463147 ASF1BQ9NVP2 202 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 AP4S1Q9Y587 144 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 TTC37Q6PGP7 1564 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 NYNRINQ9P2P1 1898 aaKnown RBP2.13□□□□□ -2.07
USH2A-203ENST00000463147 PTPRJQ12913 1337 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 A2MP01023 1474 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 NEO1Q92859 1461 aa2.13□□□□□ -2.07
USH2A-203ENST00000463147 CUL7Q14999 1698 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 URB2Q14146 1524 aaKnown RBP2.12□□□□□ -2.07
USH2A-203ENST00000463147 LRRC7Q96NW7 1537 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 SYCP2Q9BX26 1530 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 COL1A2P08123 1366 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 RFX7Q2KHR2 1363 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 DOCK5Q9H7D0 1870 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 LRRIQ1Q96JM4 1722 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 GLI2P10070 1586 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 NSD3Q9BZ95 1437 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 MDFIC2A0A1B0GVS7 189 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 OR4C45A6NMZ5 311 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 ATP6V1G2-DDX39BF2Z307 99 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 TFPTP0C1Z6 253 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 NPPCP23582 126 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 G0S2P27469 103 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 GZMMP51124 257 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 HTR4Q13639 388 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 POU6F1Q14863 301 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 TAF1AQ15573 450 aaPredicted RBP2.12□□□□□ -2.07
USH2A-203ENST00000463147 ACOT6Q3I5F7 207 aaPredicted RBP2.12□□□□□ -2.07
USH2A-203ENST00000463147 DEFB134Q4QY38 66 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 TNFAIP8L3Q5GJ75 292 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 OR2D3Q8NGH3 330 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 OR10D4PQ8NGN7 298 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 RPS4Y2Q8TD47 263 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 S100ZQ8WXG8 99 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 RMND5BQ96G75 393 aaPredicted RBP2.12□□□□□ -2.07
USH2A-203ENST00000463147 C9orf16Q9BUW7 83 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 TAS2R7Q9NYW3 318 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 GLTPQ9NZD2 209 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 USP32Q8NFA0 1604 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 ADGRB3O60242 1522 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 MAGI3Q5TCQ9 1506 aa2.12□□□□□ -2.07
USH2A-203ENST00000463147 ARHGEF10O15013 1369 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 IFT172Q9UG01 1749 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 MYH7BA7E2Y1 1941 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 DIP2AQ14689 1571 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 UGGT1Q9NYU2 1555 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 INO80Q9ULG1 1556 aaPredicted RBP2.11□□□□□ -2.07
USH2A-203ENST00000463147 MAST2Q6P0Q8 1798 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 ABCA6Q8N139 1617 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 ADCY10Q96PN6 1610 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 CC2D2AQ9P2K1 1620 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 A0A087WXM4 84 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 DISC1C4P0D8 188 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 PSMD12O00232 456 aaPredicted RBP2.11□□□□□ -2.07
USH2A-203ENST00000463147 PGRMC1O00264 195 aaKnown RBP2.11□□□□□ -2.07
USH2A-203ENST00000463147 SLC17A3O00476 420 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 NDUFA2O43678 99 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 EDF1O60869 148 aaKnown RBP2.11□□□□□ -2.07
USH2A-203ENST00000463147 NOS1APO75052 506 aaPredicted RBP2.11□□□□□ -2.07
USH2A-203ENST00000463147 ZNF140P52738 457 aaPredicted RBP2.11□□□□□ -2.07
USH2A-203ENST00000463147 TAS2R45P59539 299 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 RAB14P61106 215 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 COPZ1P61923 177 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 KRR1Q13601 381 aaKnown RBP2.11□□□□□ -2.07
USH2A-203ENST00000463147 HACD4Q5VWC8 232 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 OR6V1Q8N148 313 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 FAM172AQ8WUF8 416 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 C10orf82Q8WW14 230 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 SFRP2Q96HF1 295 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 CNBD2Q96M20 576 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 ERMAPQ96PL5 475 aaPredicted RBP2.11□□□□□ -2.07
USH2A-203ENST00000463147 OR8B2Q96RD0 313 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 NMNAT3Q96T66 252 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 C6orf62Q9GZU0 229 aaPredicted RBP2.11□□□□□ -2.07
USH2A-203ENST00000463147 PAQR5Q9NXK6 330 aaPredicted RBP2.11□□□□□ -2.07
USH2A-203ENST00000463147 STOML2Q9UJZ1 356 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 VPREB3Q9UKI3 123 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 KLK5Q9Y337 293 aaPredicted RBP2.11□□□□□ -2.07
USH2A-203ENST00000463147 PRELID3BQ9Y3B1 194 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 ERVK-7P63135 1459 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 AGLP35573 1532 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.11□□□□□ -2.07
USH2A-203ENST00000463147 DUOX2Q9NRD8 1548 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 MYH8P13535 1937 aa2.11□□□□□ -2.07
USH2A-203ENST00000463147 NID2Q14112 1375 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 RTL9Q8NET4 1388 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 ZNF407Q9C0G0 2248 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 LTBP2Q14767 1821 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 IQGAP3Q86VI3 1631 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms