RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 VPS13CQ709C8 3753 aa6.36□□□□□ -1.39
USP4-207ENST00000462673 MED13LQ71F56 2210 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 MAST4O15021 2626 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 CR1P17927 2039 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 IGHV1-69DA0A0B4J2H0 117 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 FAM24AA6NFZ4 105 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 TCAPO15273 167 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 TCF21O43680 179 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 IGHV1-69P01742 117 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 IGHV1-8P0DP01 117 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 EPHA1P21709 976 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 DYNLT3P51808 116 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 NUTF2P61970 127 aaKnown RBP6.35□□□□□ -1.39
USP4-207ENST00000462673 ACOT6Q3I5F7 207 aaPredicted RBP6.35□□□□□ -1.39
USP4-207ENST00000462673 COA6Q5JTJ3 125 aaKnown RBP6.35□□□□□ -1.39
USP4-207ENST00000462673 FAM90A2PQ658T7 463 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 DUX4L9Q6RFH8 374 aaPredicted RBP6.35□□□□□ -1.39
USP4-207ENST00000462673 ZNF497Q6ZNH5 498 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 C9orf139Q6ZV77 190 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 MOB1BQ7L9L4 216 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 ZNF695Q8IW36 515 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 TMEM252Q8N6L7 170 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 OR5C1Q8NGR4 320 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 IL22RA2Q969J5 263 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 GALMQ96C23 342 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 BTF3L4Q96K17 158 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 TMEM68Q96MH6 324 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 PSMG3Q9BT73 122 aaPredicted RBP6.35□□□□□ -1.39
USP4-207ENST00000462673 FAAP24Q9BTP7 215 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 TMEM222Q9H0R3 208 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 TMEM133Q9H2Q1 129 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 GAB2Q9UQC2 676 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 TBL2Q9Y4P3 447 aaKnown RBP6.35□□□□□ -1.39
USP4-207ENST00000462673 AMMECR1Q9Y4X0 333 aaPredicted RBP6.35□□□□□ -1.39
USP4-207ENST00000462673 DOCK11Q5JSL3 2073 aa6.35□□□□□ -1.39
USP4-207ENST00000462673 TRAV40A0A0B4J280 105 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 CENPVL3A0A0U1RRI6 287 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 C3orf85A0A1B0GTC6 90 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 AMBPP02760 352 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 TFF1P04155 84 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 CTXN2P0C2S0 81 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 AADACP22760 399 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 IL3RAP26951 378 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 S100GP29377 79 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 KIR2DS4P43632 304 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 RAB11AP62491 216 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 KIR2DS1Q14954 304 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 SRSF7Q16629 238 aaKnown RBP eCLIP6.34□□□□□ -1.39
USP4-207ENST00000462673 IQCJQ1A5X6 159 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 SP6Q3SY56 376 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 MINOS1Q5TGZ0 78 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 GFI1BQ5VTD9 330 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 CCDC144NLQ6NUI1 221 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 ABHD12Q8N2K0 398 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 OR11H6Q8NGC7 330 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 TMEM18Q96B42 140 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 R3HDM4Q96D70 268 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 TMEM56Q96MV1 263 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 OR5B12Q96R08 314 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 TBX15Q96SF7 602 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 NEU1Q99519 415 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 AGMATQ9BSE5 352 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 CABLES2Q9BTV7 478 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 CLEC7AQ9BXN2 247 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 LINC00574Q9H8X3 128 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 Q9N2K0 584 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 IDI2-AS1Q9NZ38 188 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 GNG13Q9P2W3 67 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 NAT8Q9UHE5 227 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 MINOS1-NBL1R4GNA1 71 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 TMEM56-RWDD3S4R434 201 aa6.34□□□□□ -1.39
USP4-207ENST00000462673 HIVEP2P31629 2446 aa6.34□□□□□ -1.4
USP4-207ENST00000462673 HIVEP1P15822 2718 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 TRBV6-6A0A0A6YYG2 114 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 A8MWP6 167 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 NPIPB11E5RHQ5 1161 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 H0Y980 276 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 EREGO14944 169 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 NPFFO15130 113 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 MPPED1O15442 326 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 AVPP01185 164 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 PPYP01298 95 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 METTL15P1P0C7V9 234 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 CCL3L1P16619 93 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 HTR1DP28221 377 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 BRS3P32247 399 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 CCL20P78556 96 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 HTD2P86397 168 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 RELQ04864 619 aaPredicted RBP6.33□□□□□ -1.4
USP4-207ENST00000462673 BRICD5Q6PL45 260 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 Q6ZS49 121 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 C1orf229Q6ZS94 237 aaPredicted RBP6.33□□□□□ -1.4
USP4-207ENST00000462673 CYP2G1PQ6ZSU1 146 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 TGIF2LXQ8IUE1 241 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 GAPTQ8N292 157 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 Q8N7P7 452 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 TPRX1Q8N7U7 411 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 OR9G1Q8NH87 305 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 SCGB1C1Q8TD33 95 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 MRGPRDQ8TDS7 321 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms