RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 MCFD2Q8NI22 146 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 GPHA2Q96T91 129 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 PRRT1Q99946 306 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 B9D2Q9BPU9 175 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 NAA50Q9GZZ1 169 aaKnown RBP6.91□□□□□ -1.3
DDX39B-216ENST00000462421 TUBA4BQ9H853 241 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 PLEKHA3Q9HB20 300 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 MCUBQ9NWR8 336 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 CACFD1Q9UGQ2 172 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 ANAPC10Q9UM13 185 aa6.91□□□□□ -1.3
DDX39B-216ENST00000462421 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.9□□□□□ -1.3
DDX39B-216ENST00000462421 FABP12A6NFH5 140 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 K7EIL1 84 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 IFNA17P01571 189 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 CD3DP04234 171 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 REG1AP05451 166 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 OR13C7P0DN81 318 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 ALDH3B2P48448 385 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 HOXA1P49639 335 aaPredicted RBP6.9□□□□□ -1.3
DDX39B-216ENST00000462421 KIAA0141Q14154 515 aaPredicted RBP6.9□□□□□ -1.3
DDX39B-216ENST00000462421 POU2AF1Q16633 256 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 Q56UQ5 140 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 PLET1Q6UQ28 207 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 UBAC2Q8NBM4 344 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 OR2K2Q8NGT1 345 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 OR52I2Q8NH67 350 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 SLC2A8Q9NY64 477 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 MTFP1Q9UDX5 166 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 KCNIP3Q9Y2W7 256 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 UFC1Q9Y3C8 167 aa6.9□□□□□ -1.3
DDX39B-216ENST00000462421 C3orf85A0A1B0GTC6 90 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 MYOD1P15172 320 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 AREGP15514 252 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 OR2B8PP59922 312 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 DEFA5Q01523 94 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 RELQ04864 619 aaPredicted RBP6.89□□□□□ -1.31
DDX39B-216ENST00000462421 EIF4EBP1Q13541 118 aaPredicted RBP6.89□□□□□ -1.31
DDX39B-216ENST00000462421 KLF5Q13887 457 aaPredicted RBP6.89□□□□□ -1.31
DDX39B-216ENST00000462421 SPCS2Q15005 226 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 GUCA2BQ16661 112 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 ANKRD55Q3KP44 614 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 PYDC2Q56P42 97 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 SPANXN2Q5MJ10 180 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 CLEC19AQ6UXS0 136 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 RBPMS2Q6ZRY4 209 aaKnown RBP6.89□□□□□ -1.31
DDX39B-216ENST00000462421 SLC16A13Q7RTY0 426 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 LAX1Q8IWV1 398 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 GDPD1Q8N9F7 314 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 TERB2Q8NHR7 220 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 ISOC1Q96CN7 298 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 TECRQ9NZ01 308 aaKnown RBP6.89□□□□□ -1.31
DDX39B-216ENST00000462421 KLK11Q9UBX7 282 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 PLXNB1O43157 2135 aa6.89□□□□□ -1.31
DDX39B-216ENST00000462421 C15orf61A6NNL5 157 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 TEX22C9J3V5 150 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 CORTO00230 105 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 NUPL2O15504 423 aaKnown RBP6.88□□□□□ -1.31
DDX39B-216ENST00000462421 IGHV3-23P01764 117 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 CRYGCP07315 174 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 IL6RP08887 468 aaPredicted RBP6.88□□□□□ -1.31
DDX39B-216ENST00000462421 SPNP16150 400 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 CTRB1P17538 263 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 GPR183P32249 361 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 RND3P61587 244 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 SRPXP78539 464 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 DHODHQ02127 395 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 SURF2Q15527 256 aaPredicted RBP6.88□□□□□ -1.31
DDX39B-216ENST00000462421 ASPHD1Q5U4P2 390 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 CTRB2Q6GPI1 263 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 LAMTOR1Q6IAA8 161 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 LYSMD2Q8IV50 215 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 TOMM5Q8N4H5 51 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 VN1R17PQ8TDU5 208 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 SMIM4Q8WVI0 70 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 MARC2Q969Z3 335 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 MRGPRFQ96AM1 343 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 MISP3Q96FF7 219 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 BSCL2Q96G97 398 aaPredicted RBP6.88□□□□□ -1.31
DDX39B-216ENST00000462421 NARS2Q96I59 477 aaKnown RBP6.88□□□□□ -1.31
DDX39B-216ENST00000462421 HIPK2Q9H2X6 1198 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 NOTCH1P46531 2555 aa6.88□□□□□ -1.31
DDX39B-216ENST00000462421 VWFP04275 2813 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 TRBV9A0A0B4J1U6 114 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 TEX50A0A1B0GTY4 177 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 PPP5D1E7EU14 171 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 H3BMQ9 156 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 CTDSPLO15194 276 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 CTSDP07339 412 aaPredicted RBP6.87□□□□□ -1.31
DDX39B-216ENST00000462421 PTBP1P26599 531 aaKnown RBP eCLIP6.87□□□□□ -1.31
DDX39B-216ENST00000462421 SSBP2P81877 361 aaPredicted RBP6.87□□□□□ -1.31
DDX39B-216ENST00000462421 TRIQKQ629K1 86 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 ZNF57Q68EA5 555 aaPredicted RBP6.87□□□□□ -1.31
DDX39B-216ENST00000462421 SPSB3Q6PJ21 355 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 NOXA1Q86UR1 476 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 FAM219AQ8IW50 185 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 CADM3Q8N126 398 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 OR13C8Q8NGS7 320 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 PINX1Q96BK5 328 aaKnown RBP6.87□□□□□ -1.31
DDX39B-216ENST00000462421 C21orf62Q9NYP8 219 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 SIGLEC8Q9NYZ4 499 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms