RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 IGKV1D-12P01611 117 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 GYPCP04921 128 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 GUSBP08236 651 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 LIMS3P0CW19 117 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 LIMS4P0CW20 117 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 ANP32AP39687 249 aaKnown RBP1.41□□□□□ -2.18
RFC4-211ENST00000460408 CTAG1AP78358 180 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 USF2Q15853 346 aaPredicted RBP1.41□□□□□ -2.18
RFC4-211ENST00000460408 TMEM161BQ8NDZ6 487 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 OR9I1Q8NGQ6 314 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 WFDC5Q8TCV5 224 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 DTD1Q8TEA8 209 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 CYTH2Q99418 400 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 KLF6Q99612 283 aaPredicted RBP1.41□□□□□ -2.18
RFC4-211ENST00000460408 KRTAP4-1Q9BYQ7 146 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 TREM1Q9NP99 234 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 OR51B4Q9Y5P0 310 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 DNAJC13O75165 2243 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 CHD5Q8TDI0 1954 aa1.41□□□□□ -2.18
RFC4-211ENST00000460408 FAM92AA1XBS5 289 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 OR5K4A6NMS3 321 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 EEF1E1-BLOC1S5C9J1V9 151 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 SULT1C2O00338 296 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 GPR171O14626 319 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 EEF1E1O43324 174 aaKnown RBP1.4□□□□□ -2.19
RFC4-211ENST00000460408 DEDDO75618 318 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 TNFAIP8O95379 198 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 OR12D1P0DN82 309 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 PRB4P10163 310 aaPredicted RBP1.4□□□□□ -2.19
RFC4-211ENST00000460408 NEFHP12036 1026 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 AKR1C4P17516 323 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 ACTR1BP42025 376 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 HSPA13P48723 471 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 TFAMQ00059 246 aaKnown RBP1.4□□□□□ -2.19
RFC4-211ENST00000460408 SLAMF1Q13291 335 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 SKP2Q13309 424 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 PAFAH1B3Q15102 231 aaKnown RBP1.4□□□□□ -2.19
RFC4-211ENST00000460408 OR8G1Q15617 311 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 RBM48Q5RL73 367 aaKnown RBP1.4□□□□□ -2.19
RFC4-211ENST00000460408 NOXRED1Q6NXP6 359 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 OR11L1Q8NGX0 322 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 ERMNQ8TAM6 284 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 SLC37A2Q8TED4 501 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 PATE1Q8WXA2 126 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 HIST1H2BAQ96A08 127 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 MED18Q9BUE0 208 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 CENPHQ9H3R5 247 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 KCNIP2Q9NS61 270 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 CFAP45Q9UL16 551 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 NOSIPQ9Y314 301 aaKnown RBP1.4□□□□□ -2.19
RFC4-211ENST00000460408 HERC1Q15751 4861 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 ALPK2Q86TB3 2170 aa1.4□□□□□ -2.19
RFC4-211ENST00000460408 IQCF5A8MTL0 148 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 C17orf98A8MV24 154 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 E7EQ34 232 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 G3V3Q6 166 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 M0QX08 132 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 KLF7O75840 302 aaPredicted RBP1.39□□□□□ -2.19
RFC4-211ENST00000460408 SNAP29O95721 258 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 SERPINA7P05543 415 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 SYT1P21579 422 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 OPRM1P35372 400 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 CAPZBP47756 277 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 MAP3K7CLP57077 242 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 UBA52P62987 128 aaKnown RBP1.39□□□□□ -2.19
RFC4-211ENST00000460408 DCDP81605 110 aaKnown RBP1.39□□□□□ -2.19
RFC4-211ENST00000460408 FAM3AP98173 230 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 XRCC4Q13426 336 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 APOFQ13790 326 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 NIPAL1Q6NVV3 410 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 EBLN2Q6P2I7 272 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 TCF23Q7RTU1 214 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 MTERF4Q7Z6M4 381 aaKnown RBP1.39□□□□□ -2.19
RFC4-211ENST00000460408 MSRB3Q8IXL7 192 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 SELENOHQ8IZQ5 122 aaKnown RBP1.39□□□□□ -2.19
RFC4-211ENST00000460408 ZFAND2AQ8N6M9 145 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 MNS1Q8NEH6 495 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 OR5B17Q8NGF7 314 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 CCL4L1Q8NHW4 92 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 ANGPTL6Q8NI99 470 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 SUN5Q8TC36 379 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 CD200R1Q8TD46 325 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 RNASEH2CQ8TDP1 164 aaKnown RBP1.39□□□□□ -2.19
RFC4-211ENST00000460408 GTF2H4Q92759 462 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 TIPINQ9BVW5 301 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 POTEKPQ9BYX7 375 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 FAIMQ9NVQ4 179 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 CHMP5Q9NZZ3 219 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 VPREB3Q9UKI3 123 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 MALRD1Q5VYJ5 2156 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 HECTD4Q9Y4D8 3996 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 ABCA13Q86UQ4 5058 aa1.39□□□□□ -2.19
RFC4-211ENST00000460408 FRAS1Q86XX4 4008 aa1.38□□□□□ -2.19
RFC4-211ENST00000460408 MED12Q93074 2177 aa1.38□□□□□ -2.19
RFC4-211ENST00000460408 LYSTQ99698 3801 aa1.38□□□□□ -2.19
RFC4-211ENST00000460408 YLPM1P49750 1951 aaKnown RBP1.38□□□□□ -2.19
RFC4-211ENST00000460408 GOLGA6L10A6NI86 522 aa1.38□□□□□ -2.19
RFC4-211ENST00000460408 EFCAB9A8MZ26 197 aa1.38□□□□□ -2.19
RFC4-211ENST00000460408 HSBP1L1C9JCN9 74 aa1.38□□□□□ -2.19
RFC4-211ENST00000460408 F8VZ95 297 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms