RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 MSGN1A6NI15 193 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 CD5LO43866 347 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 PPBPP02775 128 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 C1QTNF9P0C862 333 aa8.31□□□□□ -1.08
UFD1-205ENST00000459854 WIPI1Q5MNZ9 446 aaPredicted RBP8.31□□□□□ -1.08
UFD1-205ENST00000459854 TIAF1O95411 115 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 CTSSP25774 331 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 GNB2P62879 340 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 SLC25A47Q6Q0C1 308 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 TMEM108Q6UXF1 575 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 CIARTQ8N365 385 aaPredicted RBP8.3□□□□□ -1.08
UFD1-205ENST00000459854 MUC15Q8N387 334 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 KCNK17Q96T54 332 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 C20orf144Q9BQM9 153 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 LINC00470Q9BZP3 86 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 TNFRSF19Q9NS68 423 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 DLL3Q9NYJ7 618 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 IFNL4K9M1U5 179 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 RRHO14718 337 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 HOXA3O43365 443 aaPredicted RBP8.3□□□□□ -1.08
UFD1-205ENST00000459854 LIFP15018 202 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 RPL8P62917 257 aaKnown RBP8.3□□□□□ -1.08
UFD1-205ENST00000459854 SSBP2P81877 361 aaPredicted RBP8.3□□□□□ -1.08
UFD1-205ENST00000459854 PAX2Q02962 417 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 PRSS8Q16651 343 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 C10orf128Q5T292 105 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 WFDC8Q8IUA0 241 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 TUSC5Q8IXB3 177 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 ORMDL3Q8N138 153 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 AGMATQ9BSE5 352 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 FNDC4Q9H6D8 234 aaPredicted RBP8.3□□□□□ -1.08
UFD1-205ENST00000459854 G6PC2Q9NQR9 355 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 TMEM56-RWDD3S4R434 201 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 TRAV17A0A0B4J275 112 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 IGHV3-64DA0A0J9YX35 117 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 SNRPCP09234 159 aaKnown RBP8.3□□□□□ -1.08
UFD1-205ENST00000459854 ADMP35318 185 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 ZNF479Q96JC4 524 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 RHOGP84095 191 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 BMPERQ8N8U9 685 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 TMEM186Q96B77 213 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 RNF126Q9BV68 326 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 RTN4RQ9BZR6 473 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 ONECUT1Q9UBC0 465 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 LY96Q9Y6Y9 160 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 DOCK9Q9BZ29 2069 aa8.3□□□□□ -1.08
UFD1-205ENST00000459854 TMSB15BA0A087X1C1 80 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 CDIPTO14735 213 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 P2RY6Q15077 328 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 ACSF3Q4G176 576 aaPredicted RBP8.29□□□□□ -1.08
UFD1-205ENST00000459854 CXorf67Q86X51 503 aaPredicted RBP8.29□□□□□ -1.08
UFD1-205ENST00000459854 RFLNBQ8N5W9 214 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 LPAR2Q9HBW0 351 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 KLF4O43474 513 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 DLX6P56179 175 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 INSIG2Q9Y5U4 225 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 ZFC3H1O60293 1989 aaKnown RBP8.29□□□□□ -1.08
UFD1-205ENST00000459854 ZNF318Q5VUA4 2279 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 TRAV8-6A0A0B4J262 113 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 LOC101059948A0A1B0GTJ6 334 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 LYZL6O75951 148 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 UNC119Q13432 240 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 OR4A5Q8NH83 315 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 TMEM160Q9NX00 188 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 MOB4Q9Y3A3 225 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 AHCTF1Q8WYP5 2266 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 MYLKQ15746 1914 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 C3orf80F5H4A9 247 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 PYY3Q5JQD4 70 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 FADS6Q8N9I5 356 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 ZPLD1Q8TCW7 415 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 RAB1CQ92928 201 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 CLEC5AQ9NY25 188 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 MRPL27Q9P0M9 148 aaKnown RBP8.29□□□□□ -1.08
UFD1-205ENST00000459854 TRANK1O15050 2925 aa8.29□□□□□ -1.08
UFD1-205ENST00000459854 A0A1W2PR80 420 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 SHISA8B8ZZ34 492 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 PPIAL4DF5H284 164 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 PEX7O00628 323 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 HBDP02042 147 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 IL6RP08887 468 aaPredicted RBP8.28□□□□□ -1.08
UFD1-205ENST00000459854 SCTP09683 121 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 MMDQ15546 238 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 LINC01590Q5TEZ4 76 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.28□□□□□ -1.08
UFD1-205ENST00000459854 NXT2Q9NPJ8 142 aaKnown RBP8.28□□□□□ -1.08
UFD1-205ENST00000459854 ASXL3Q9C0F0 2248 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 DPM2O94777 84 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 RP1P56715 2156 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 ACTL10Q5JWF8 245 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 LY6G6FQ5SQ64 297 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 FAM71F2Q6NXP2 309 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 ZNF48Q96MX3 618 aaPredicted RBP8.28□□□□□ -1.08
UFD1-205ENST00000459854 SPSB2Q99619 263 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 RTBDNQ9BSG5 229 aaPredicted RBP8.28□□□□□ -1.08
UFD1-205ENST00000459854 TCF19Q9Y242 345 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 A8MWP6 167 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.28□□□□□ -1.08
UFD1-205ENST00000459854 H3BRM9 83 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 H7C1H1 209 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms