RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 BRI3O95415 125 aa14.33□□□□□ -0.12
USP39-209ENST00000458268 HLA-AP01891 365 aaKnown RBP14.33□□□□□ -0.12
USP39-209ENST00000458268 CTRB1P17538 263 aa14.33□□□□□ -0.12
USP39-209ENST00000458268 INSL3P51460 131 aa14.33□□□□□ -0.12
USP39-209ENST00000458268 AKR1C2P52895 323 aa14.33□□□□□ -0.12
USP39-209ENST00000458268 SP6Q3SY56 376 aa14.33□□□□□ -0.12
USP39-209ENST00000458268 CTRB2Q6GPI1 263 aa14.33□□□□□ -0.12
USP39-209ENST00000458268 OR4A16Q8NH70 328 aa14.33□□□□□ -0.12
USP39-209ENST00000458268 ZNF486Q96H40 463 aaPredicted RBP14.33□□□□□ -0.12
USP39-209ENST00000458268 ZC4H2Q9NQZ6 224 aa14.33□□□□□ -0.12
USP39-209ENST00000458268 RABL2AQ9UBK7 228 aaPredicted RBP14.33□□□□□ -0.12
USP39-209ENST00000458268 RABL2BQ9UNT1 228 aa14.33□□□□□ -0.12
USP39-209ENST00000458268 BMPR1BO00238 502 aa14.32□□□□□ -0.12
USP39-209ENST00000458268 CTDSPLO15194 276 aa14.32□□□□□ -0.12
USP39-209ENST00000458268 IGKV1-39P01597 117 aa14.32□□□□□ -0.12
USP39-209ENST00000458268 IGKV1D-39P04432 117 aa14.32□□□□□ -0.12
USP39-209ENST00000458268 TATDN3Q17R31 274 aa14.32□□□□□ -0.12
USP39-209ENST00000458268 IZUMO4Q1ZYL8 232 aa14.32□□□□□ -0.12
USP39-209ENST00000458268 CLEC19AQ6UXS0 136 aa14.32□□□□□ -0.12
USP39-209ENST00000458268 EEF1AKMT3Q96AZ1 226 aa14.32□□□□□ -0.12
USP39-209ENST00000458268 FANCD2OSQ96PS1 177 aa14.32□□□□□ -0.12
USP39-209ENST00000458268 TP53RKQ96S44 253 aa14.32□□□□□ -0.12
USP39-209ENST00000458268 TSC22D3Q99576 134 aa14.32□□□□□ -0.12
USP39-209ENST00000458268 RBM38Q9H0Z9 239 aaKnown RBP14.32□□□□□ -0.12
USP39-209ENST00000458268 PRNDQ9UKY0 176 aa14.32□□□□□ -0.12
USP39-209ENST00000458268 IGHV3-21A0A0B4J1V1 117 aa14.31□□□□□ -0.12
USP39-209ENST00000458268 TEX13DA0A0J9YY54 714 aaPredicted RBP14.31□□□□□ -0.12
USP39-209ENST00000458268 C3orf85A0A1B0GTC6 90 aa14.31□□□□□ -0.12
USP39-209ENST00000458268 H0Y980 276 aa14.31□□□□□ -0.12
USP39-209ENST00000458268 CRYGCP07315 174 aa14.31□□□□□ -0.12
USP39-209ENST00000458268 SPNP16150 400 aa14.31□□□□□ -0.12
USP39-209ENST00000458268 HIST1H1BP16401 226 aaKnown RBP14.31□□□□□ -0.12
USP39-209ENST00000458268 RND3P61587 244 aa14.31□□□□□ -0.12
USP39-209ENST00000458268 SPINK9Q5DT21 86 aa14.31□□□□□ -0.12
USP39-209ENST00000458268 SLC25A24Q6NUK1 477 aa14.31□□□□□ -0.12
USP39-209ENST00000458268 OR51S1Q8NGJ8 323 aa14.31□□□□□ -0.12
USP39-209ENST00000458268 OR9G4Q8NGQ1 327 aa14.31□□□□□ -0.12
USP39-209ENST00000458268 OR6Q1Q8NGQ2 317 aa14.31□□□□□ -0.12
USP39-209ENST00000458268 SEC22AQ96IW7 307 aa14.31□□□□□ -0.12
USP39-209ENST00000458268 NXF2Q9GZY0 626 aaKnown RBP14.31□□□□□ -0.12
USP39-209ENST00000458268 DNAH3Q8TD57 4116 aa14.3□□□□□ -0.12
USP39-209ENST00000458268 MFSD2BA6NFX1 497 aa14.3□□□□□ -0.12
USP39-209ENST00000458268 DBX1A6NMT0 343 aa14.3□□□□□ -0.12
USP39-209ENST00000458268 C15orf61A6NNL5 157 aa14.3□□□□□ -0.12
USP39-209ENST00000458268 CTSDP07339 412 aaPredicted RBP14.3□□□□□ -0.12
USP39-209ENST00000458268 ARL3P36405 182 aa14.3□□□□□ -0.12
USP39-209ENST00000458268 WT1-ASQ06250 92 aa14.3□□□□□ -0.12
USP39-209ENST00000458268 CD69Q07108 199 aa14.3□□□□□ -0.12
USP39-209ENST00000458268 KLF5Q13887 457 aaPredicted RBP14.3□□□□□ -0.12
USP39-209ENST00000458268 LSM10Q969L4 123 aaKnown RBP14.3□□□□□ -0.12
USP39-209ENST00000458268 SORL1Q92673 2214 aa14.29□□□□□ -0.12
USP39-209ENST00000458268 IGLV11-55A0A075B6I3 123 aa14.29□□□□□ -0.12
USP39-209ENST00000458268 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.29□□□□□ -0.12
USP39-209ENST00000458268 ANKRD20A5PA0PJZ0 165 aa14.29□□□□□ -0.12
USP39-209ENST00000458268 GSTZ1O43708 216 aaPredicted RBP14.29□□□□□ -0.12
USP39-209ENST00000458268 OR2C1O95371 312 aa14.29□□□□□ -0.12
USP39-209ENST00000458268 GDPD1Q8N9F7 314 aa14.29□□□□□ -0.12
USP39-209ENST00000458268 TMEM56Q96MV1 263 aa14.29□□□□□ -0.12
USP39-209ENST00000458268 PRRT1Q99946 306 aa14.29□□□□□ -0.12
USP39-209ENST00000458268 THAP7Q9BT49 309 aaPredicted RBP14.29□□□□□ -0.12
USP39-209ENST00000458268 FKBP11Q9NYL4 201 aa14.29□□□□□ -0.12
USP39-209ENST00000458268 CYB5BO43169 146 aa14.28□□□□□ -0.12
USP39-209ENST00000458268 GPR183P32249 361 aa14.28□□□□□ -0.12
USP39-209ENST00000458268 THOC7Q6I9Y2 204 aaKnown RBP14.28□□□□□ -0.12
USP39-209ENST00000458268 CCDC140Q96MF4 163 aa14.28□□□□□ -0.12
USP39-209ENST00000458268 NDUFA4L2Q9NRX3 87 aa14.28□□□□□ -0.12
USP39-209ENST00000458268 FAM212BQ9NTI7 297 aaPredicted RBP14.28□□□□□ -0.12
USP39-209ENST00000458268 THYN1Q9P016 225 aa14.28□□□□□ -0.12
USP39-209ENST00000458268 SELENOKQ9Y6D0 94 aa14.28□□□□□ -0.12
USP39-209ENST00000458268 GGCTO75223 188 aaKnown RBP14.27□□□□□ -0.13
USP39-209ENST00000458268 OR5AC1P0C628 307 aa14.27□□□□□ -0.13
USP39-209ENST00000458268 GP9P14770 177 aa14.27□□□□□ -0.13
USP39-209ENST00000458268 Q8N402 240 aa14.27□□□□□ -0.13
USP39-209ENST00000458268 UBAC2Q8NBM4 344 aa14.27□□□□□ -0.13
USP39-209ENST00000458268 OR5B3Q8NH48 314 aa14.27□□□□□ -0.13
USP39-209ENST00000458268 SRSF8Q9BRL6 282 aaKnown RBP14.27□□□□□ -0.13
USP39-209ENST00000458268 TMEM14BQ9NUH8 114 aa14.27□□□□□ -0.13
USP39-209ENST00000458268 PEMTQ9UBM1 199 aa14.27□□□□□ -0.13
USP39-209ENST00000458268 SCP2D1Q9UJQ7 156 aa14.27□□□□□ -0.13
USP39-209ENST00000458268 DMRT1Q9Y5R6 373 aa14.27□□□□□ -0.13
USP39-209ENST00000458268 V9GYH0 126 aa14.27□□□□□ -0.13
USP39-209ENST00000458268 IGHV3-35A0A0C4DH35 117 aa14.26□□□□□ -0.13
USP39-209ENST00000458268 ZNF320A2RRD8 509 aa14.26□□□□□ -0.13
USP39-209ENST00000458268 ATG12O94817 140 aa14.26□□□□□ -0.13
USP39-209ENST00000458268 IGKV1-5P01602 117 aa14.26□□□□□ -0.13
USP39-209ENST00000458268 PTBP1P26599 531 aaKnown RBP eCLIP14.26□□□□□ -0.13
USP39-209ENST00000458268 DCTN2Q13561 401 aaKnown RBP14.26□□□□□ -0.13
USP39-209ENST00000458268 HSD17B13Q7Z5P4 300 aaPredicted RBP14.26□□□□□ -0.13
USP39-209ENST00000458268 TOMM5Q8N4H5 51 aa14.26□□□□□ -0.13
USP39-209ENST00000458268 SLC35G3Q8N808 338 aa14.26□□□□□ -0.13
USP39-209ENST00000458268 DYNLRB2Q8TF09 96 aa14.26□□□□□ -0.13
USP39-209ENST00000458268 RRNAD1Q96FB5 475 aaKnown RBP14.26□□□□□ -0.13
USP39-209ENST00000458268 MISP3Q96FF7 219 aa14.26□□□□□ -0.13
USP39-209ENST00000458268 CXorf58Q96LI9 332 aa14.26□□□□□ -0.13
USP39-209ENST00000458268 SOSTQ9BQB4 213 aa14.26□□□□□ -0.13
USP39-209ENST00000458268 RTBDNQ9BSG5 229 aaPredicted RBP14.26□□□□□ -0.13
USP39-209ENST00000458268 PDCD10Q9BUL8 212 aa14.26□□□□□ -0.13
USP39-209ENST00000458268 C5orf66Q9H5L9 145 aa14.26□□□□□ -0.13
USP39-209ENST00000458268 NAA60Q9H7X0 242 aa14.26□□□□□ -0.13
USP39-209ENST00000458268 IFNA17P01571 189 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms