RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 ELOVL1Q9BW60 279 aa8.97□□□□□ -0.97
RFX3-211ENST00000458034 HINT2Q9BX68 163 aa8.97□□□□□ -0.97
RFX3-211ENST00000458034 SPEGQ15772 3267 aa8.97□□□□□ -0.97
RFX3-211ENST00000458034 TRAV20A0A0B4J274 112 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 A0A0U1RQK1 487 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 A0A1W2PN81 502 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 ZNF320A2RRD8 509 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 TSTD3H0UI37 97 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 C16orf97H3BN30 126 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 NDUFB7P17568 137 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 CCKARP32238 428 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 PDLIM4P50479 330 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 PKIAP61925 76 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 ZNF833PQ6ZTB9 187 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 TCF23Q7RTU1 214 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 PNKDQ8N490 385 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 RPRMLQ8N4K4 120 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 FAM216BQ8N7L0 139 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 OR4A5Q8NH83 315 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 ZCCHC14Q8WYQ9 949 aaKnown RBP8.96□□□□□ -0.98
RFX3-211ENST00000458034 TECRQ9NZ01 308 aaKnown RBP8.96□□□□□ -0.98
RFX3-211ENST00000458034 FUT9Q9Y231 359 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 PRR14LQ5THK1 2151 aa8.96□□□□□ -0.98
RFX3-211ENST00000458034 SCO2A0A1W2PP80 73 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 C17orf100A8MU93 164 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 DLL1O00548 723 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 KLK10O43240 276 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 GCGP01275 180 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 CT45A6P0DMU7 189 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 CT45A5P0DMU8 189 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 CT45A7P0DMV0 189 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 DEFA4P12838 97 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 IGFBP2P18065 325 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 BMP5P22003 454 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 IL3RAP26951 378 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 CNN1P51911 297 aaKnown RBP8.95□□□□□ -0.98
RFX3-211ENST00000458034 ERHP84090 104 aaKnown RBP8.95□□□□□ -0.98
RFX3-211ENST00000458034 FAM27E3Q08E93 113 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 JOSD1Q15040 202 aaPredicted RBP8.95□□□□□ -0.98
RFX3-211ENST00000458034 PQLC2Q6ZP29 291 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 C1orf229Q6ZS94 237 aaPredicted RBP8.95□□□□□ -0.98
RFX3-211ENST00000458034 ASCL5Q7RTU5 278 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 WFDC8Q8IUA0 241 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 LURAP1LQ8IV03 231 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 VSTM2AQ8TAG5 236 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 ZNF714Q96N38 554 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 MRPL32Q9BYC8 188 aaKnown RBP8.95□□□□□ -0.98
RFX3-211ENST00000458034 NGBQ9NPG2 151 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 TRAPPC1Q9Y5R8 145 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 MYO15AQ9UKN7 3530 aa8.95□□□□□ -0.98
RFX3-211ENST00000458034 YLPM1P49750 1951 aaKnown RBP8.95□□□□□ -0.98
RFX3-211ENST00000458034 URB1O60287 2271 aaKnown RBP8.94□□□□□ -0.98
RFX3-211ENST00000458034 PPIAL4EA0A075B759 164 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 TEX50A0A1B0GTY4 177 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 PPIAL4DF5H284 164 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 INS-IGF2F8WCM5 200 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 NDUFB3O43676 98 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 AMBPP02760 352 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 OR4A8P0C604 315 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 PPIAL4FP0DN26 164 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 USF1P22415 310 aaPredicted RBP8.94□□□□□ -0.98
RFX3-211ENST00000458034 GPX4P36969 197 aaPredicted RBP8.94□□□□□ -0.98
RFX3-211ENST00000458034 SUB1P53999 127 aaKnown RBP eCLIP8.94□□□□□ -0.98
RFX3-211ENST00000458034 RPL31P62899 125 aaKnown RBP8.94□□□□□ -0.98
RFX3-211ENST00000458034 DEFA6Q01524 100 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 TMEM177Q53S58 311 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 LRRC10Q5BKY1 277 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 FAM209BQ5JX69 171 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 DUX4L9Q6RFH8 374 aaPredicted RBP8.94□□□□□ -0.98
RFX3-211ENST00000458034 PDPNQ86YL7 162 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 MRPL41Q8IXM3 137 aaKnown RBP8.94□□□□□ -0.98
RFX3-211ENST00000458034 LINC00311Q8N616 119 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 C8orf31Q8N9H6 132 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 OR4P4Q8NGL7 312 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 TMEM37Q8WXS4 190 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 CACNG8Q8WXS5 425 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 NABP2Q9BQ15 211 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 COMMD5Q9GZQ3 224 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 IL36BQ9NZH7 164 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 PPIAL4AQ9Y536 164 aa8.94□□□□□ -0.98
RFX3-211ENST00000458034 YTHDF2Q9Y5A9 579 aaKnown RBP8.94□□□□□ -0.98
RFX3-211ENST00000458034 OR5G3P0C626 314 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 C1QTNF9P0C862 333 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 LINC00869P0C866 280 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 SAA1P0DJI8 122 aaPredicted RBP8.93□□□□□ -0.98
RFX3-211ENST00000458034 RNASE2P10153 161 aaKnown RBP8.93□□□□□ -0.98
RFX3-211ENST00000458034 PLA2G5P39877 138 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 RPL15P61313 204 aaKnown RBP8.93□□□□□ -0.98
RFX3-211ENST00000458034 CD69Q07108 199 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 CLEC12BQ2HXU8 276 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 COX19Q49B96 90 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 TEX38Q6PEX7 206 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 SGMS2Q8NHU3 365 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 TMEM186Q96B77 213 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 C1orf159Q96HA4 380 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 HARBI1Q96MB7 349 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 LRFN3Q9BTN0 628 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 DERL1Q9BUN8 251 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 SAP30LQ9HAJ7 183 aa8.93□□□□□ -0.98
RFX3-211ENST00000458034 TRBV9A0A0B4J1U6 114 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms