RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CECR9P0C854 216 aa16.59■□□□□ 0.25
SNX27-204ENST00000458013 PTGDSP41222 190 aa16.59■□□□□ 0.25
SNX27-204ENST00000458013 C1orf174Q8IYL3 243 aa16.59■□□□□ 0.25
SNX27-204ENST00000458013 SMDT1Q9H4I9 107 aa16.59■□□□□ 0.25
SNX27-204ENST00000458013 PDCD11Q14690 1871 aaKnown RBP16.59■□□□□ 0.25
SNX27-204ENST00000458013 LAIR2Q6ISS4 152 aa16.59■□□□□ 0.25
SNX27-204ENST00000458013 Q5PR19 223 aa16.58■□□□□ 0.25
SNX27-204ENST00000458013 CLDND2Q8NHS1 167 aa16.58■□□□□ 0.25
SNX27-204ENST00000458013 RCC1LQ96I51 464 aaKnown RBP16.58■□□□□ 0.25
SNX27-204ENST00000458013 TMEM14DPA8MWL7 114 aa16.58■□□□□ 0.25
SNX27-204ENST00000458013 UCNP55089 124 aa16.58■□□□□ 0.25
SNX27-204ENST00000458013 RPRMQ9NS64 109 aa16.58■□□□□ 0.25
SNX27-204ENST00000458013 STARD6P59095 220 aa16.58■□□□□ 0.24
SNX27-204ENST00000458013 REC114Q7Z4M0 266 aa16.58■□□□□ 0.24
SNX27-204ENST00000458013 RTBDNQ9BSG5 229 aaPredicted RBP16.58■□□□□ 0.24
SNX27-204ENST00000458013 CD55P08174 381 aa16.58■□□□□ 0.24
SNX27-204ENST00000458013 EFNB1P98172 346 aa16.58■□□□□ 0.24
SNX27-204ENST00000458013 UNQ9370/PRO34162Q6UXP9 181 aa16.58■□□□□ 0.24
SNX27-204ENST00000458013 PCP4P48539 62 aa16.58■□□□□ 0.24
SNX27-204ENST00000458013 IFI27L2Q9H2X8 130 aa16.58■□□□□ 0.24
SNX27-204ENST00000458013 TBR1Q16650 682 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 Q9H3A6 140 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 CA1P00915 261 aaPredicted RBP16.57■□□□□ 0.24
SNX27-204ENST00000458013 A0A0U1RRA0 63 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 TMEM183AQ8IXX5 376 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 FBLIM1Q8WUP2 373 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 ALKBH7Q9BT30 221 aaPredicted RBP16.57■□□□□ 0.24
SNX27-204ENST00000458013 SFXN3Q9BWM7 321 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 SEMA5BQ9P283 1151 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 NPIPB9F8W1W9 429 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 NPIPB7O75200 414 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 NBEAP1P0C6P0 100 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 CCL3L1P16619 93 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 SAXO1Q8IYX7 474 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 TGFBR3LH3BV60 316 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 SMIM10L1P0DMW3 83 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 ADMP35318 185 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 SMIM10Q96HG1 83 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 NPFFR1Q9GZQ6 430 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 IL36BQ9NZH7 164 aa16.57■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A10PA6NDY2 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A18PA6NE21 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A16PA6NEW6 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A20PA6NIJ5 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A8PA6NJQ4 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A7PA6NKC0 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A22PA8MWA6 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A12PA8MX19 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A5PA8MXJ8 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A23PA8MXZ1 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A15PP0C7V4 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A13PP0C7W8 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A14PP0C7W9 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A24PP0C7X0 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 APOBEC3AP31941 199 aaPredicted RBP16.56■□□□□ 0.24
SNX27-204ENST00000458013 PPP1R32Q7Z5V6 425 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 A0A1B0GWB2 263 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 ARPC1AQ92747 370 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 IGHV1-2P23083 117 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 C3orf36Q3SXR2 165 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 COL4A5P29400 1685 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FAM90A26D6RGX4 464 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 FBLN7Q53RD9 439 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 LINC00527Q9UJ94 153 aa16.56■□□□□ 0.24
SNX27-204ENST00000458013 NPIPB4C9JG80 1138 aa16.55■□□□□ 0.24
SNX27-204ENST00000458013 NSUN5P1Q3KNT7 163 aa16.55■□□□□ 0.24
SNX27-204ENST00000458013 CHCHD2Q9Y6H1 151 aaPredicted RBP16.55■□□□□ 0.24
SNX27-204ENST00000458013 RAMP3O60896 148 aa16.55■□□□□ 0.24
SNX27-204ENST00000458013 C2orf88Q9BSF0 95 aa16.55■□□□□ 0.24
SNX27-204ENST00000458013 FNDC4Q9H6D8 234 aaPredicted RBP16.55■□□□□ 0.24
SNX27-204ENST00000458013 OR11H12B2RN74 326 aa16.55■□□□□ 0.24
SNX27-204ENST00000458013 NDUFA2O43678 99 aa16.55■□□□□ 0.24
SNX27-204ENST00000458013 OR11H1Q8NG94 326 aa16.55■□□□□ 0.24
SNX27-204ENST00000458013 OR11H2Q8NH07 326 aa16.55■□□□□ 0.24
SNX27-204ENST00000458013 TRBV7-9A0A0J9YWB2 115 aa16.55■□□□□ 0.24
SNX27-204ENST00000458013 WDYHV1Q96HA8 205 aa16.55■□□□□ 0.24
SNX27-204ENST00000458013 TRGV2A0A075B6R0 118 aa16.54■□□□□ 0.24
SNX27-204ENST00000458013 CD200R1LQ6Q8B3 271 aa16.54■□□□□ 0.24
SNX27-204ENST00000458013 LINC00614P0C842 121 aa16.54■□□□□ 0.24
SNX27-204ENST00000458013 ZNF362Q5T0B9 420 aaPredicted RBP16.54■□□□□ 0.24
SNX27-204ENST00000458013 COLCA1Q6ZS62 124 aa16.54■□□□□ 0.24
SNX27-204ENST00000458013 SDHCQ99643 169 aaPredicted RBP16.54■□□□□ 0.24
SNX27-204ENST00000458013 TXNDC17Q9BRA2 123 aa16.54■□□□□ 0.24
SNX27-204ENST00000458013 ZNF703Q9H7S9 590 aaPredicted RBP16.54■□□□□ 0.24
SNX27-204ENST00000458013 ATRAIDQ6UW56 229 aa16.54■□□□□ 0.24
SNX27-204ENST00000458013 OR52E5Q8NH55 327 aa16.54■□□□□ 0.24
SNX27-204ENST00000458013 SPSB2Q99619 263 aa16.54■□□□□ 0.24
SNX27-204ENST00000458013 RPP21Q9H633 154 aaKnown RBP16.54■□□□□ 0.24
SNX27-204ENST00000458013 DEPPQ9NTK1 212 aa16.54■□□□□ 0.24
SNX27-204ENST00000458013 OR5A1Q8NGJ0 315 aa16.54■□□□□ 0.24
SNX27-204ENST00000458013 PTPRFP10586 1907 aa16.54■□□□□ 0.24
SNX27-204ENST00000458013 DNM1P46Q6ZS02 220 aa16.54■□□□□ 0.24
SNX27-204ENST00000458013 LNP1A1A4G5 178 aa16.53■□□□□ 0.24
SNX27-204ENST00000458013 PGPEP1LA6NFU8 196 aa16.53■□□□□ 0.24
SNX27-204ENST00000458013 B9A039 149 aa16.53■□□□□ 0.24
SNX27-204ENST00000458013 TNFSF10P50591 281 aa16.53■□□□□ 0.24
SNX27-204ENST00000458013 JMJD8Q96S16 334 aa16.53■□□□□ 0.24
SNX27-204ENST00000458013 MRPS16Q9Y3D3 137 aaKnown RBP16.53■□□□□ 0.24
SNX27-204ENST00000458013 DMRT1Q9Y5R6 373 aa16.53■□□□□ 0.24
SNX27-204ENST00000458013 IGHV3-73A0A0B4J1V6 119 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms