RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 C11orf94C9JXX5 98 aa13.58□□□□□ -0.24
CCDC43-202ENST00000457422 AP4M1O00189 453 aa13.58□□□□□ -0.24
CCDC43-202ENST00000457422 OPN1MWP04001 364 aa13.58□□□□□ -0.24
CCDC43-202ENST00000457422 OPN1MW2P0DN77 364 aa13.58□□□□□ -0.24
CCDC43-202ENST00000457422 OPN1MW3P0DN78 364 aa13.58□□□□□ -0.24
CCDC43-202ENST00000457422 RPL29P47914 159 aaKnown RBP13.58□□□□□ -0.24
CCDC43-202ENST00000457422 RPL23P62829 140 aaKnown RBP13.58□□□□□ -0.24
CCDC43-202ENST00000457422 BSXQ3C1V8 233 aa13.58□□□□□ -0.24
CCDC43-202ENST00000457422 TMEM186Q96B77 213 aa13.58□□□□□ -0.24
CCDC43-202ENST00000457422 PATZ1Q9HBE1 687 aaKnown RBP13.58□□□□□ -0.24
CCDC43-202ENST00000457422 RAXQ9Y2V3 346 aa13.58□□□□□ -0.24
CCDC43-202ENST00000457422 POLEQ07864 2286 aa13.58□□□□□ -0.24
CCDC43-202ENST00000457422 TNCP24821 2201 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 FAM90A27PA6NNH2 459 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 PDE6DO43924 150 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 CA7P43166 264 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 ZNF137PP52743 207 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 B2MP61769 119 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 FABP9Q0Z7S8 132 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 RAB31Q13636 194 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 TMEM155Q4W5P6 130 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 C2orf83Q53S99 150 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 TXNDC17Q9BRA2 123 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 TRBV24-1A0A075B6N3 115 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 IGHV1-69-2A0A0G2JMI3 117 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 PLAUP00749 431 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 S100A8P05109 93 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 REG1BP48304 166 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 CASP6P55212 293 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 ADIRFQ15847 76 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 LINC01560Q8TB33 94 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 HARBI1Q96MB7 349 aa13.57□□□□□ -0.24
CCDC43-202ENST00000457422 INS-IGF2F8WCM5 200 aa13.56□□□□□ -0.24
CCDC43-202ENST00000457422 TGOLN2O43493 480 aa13.56□□□□□ -0.24
CCDC43-202ENST00000457422 VENTXO95231 258 aa13.56□□□□□ -0.24
CCDC43-202ENST00000457422 CXorf1O96002 111 aa13.56□□□□□ -0.24
CCDC43-202ENST00000457422 MEOX2P50222 304 aa13.56□□□□□ -0.24
CCDC43-202ENST00000457422 PDPNQ86YL7 162 aa13.56□□□□□ -0.24
CCDC43-202ENST00000457422 STPG3Q8N7X2 389 aa13.56□□□□□ -0.24
CCDC43-202ENST00000457422 OR1L8Q8NGR8 309 aa13.56□□□□□ -0.24
CCDC43-202ENST00000457422 SSMEM1Q8WWF3 244 aa13.56□□□□□ -0.24
CCDC43-202ENST00000457422 ST6GALNAC6Q969X2 333 aa13.56□□□□□ -0.24
CCDC43-202ENST00000457422 C12orf57Q99622 126 aa13.56□□□□□ -0.24
CCDC43-202ENST00000457422 PRR20EP86478 221 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 PRR20CP86479 221 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 PRR20DP86480 221 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 PRR20BP86481 221 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 PRR20AP86496 221 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 SPNS3Q6ZMD2 512 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 OR10X1Q8NGY0 326 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 OR4A5Q8NH83 315 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 FAM210BQ96KR6 192 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 SSX3Q99909 188 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 NABP2Q9BQ15 211 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 F6UZH7 168 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 ARL14EPLP0DKL9 152 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 NPPCP23582 126 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 KIAA0141Q14154 515 aaPredicted RBP13.55□□□□□ -0.24
CCDC43-202ENST00000457422 TMEM144Q7Z5S9 345 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 OR4C13Q8NGP0 309 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 FLYWCH2Q96CP2 140 aaKnown RBP13.55□□□□□ -0.24
CCDC43-202ENST00000457422 IGF2RP11717 2491 aa13.55□□□□□ -0.24
CCDC43-202ENST00000457422 TRBV23-1A0A0A0MS06 115 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 FSTL3O95633 263 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 RNASE2P10153 161 aaKnown RBP13.54□□□□□ -0.24
CCDC43-202ENST00000457422 USF1P22415 310 aaPredicted RBP13.54□□□□□ -0.24
CCDC43-202ENST00000457422 GRNP28799 593 aaKnown RBP13.54□□□□□ -0.24
CCDC43-202ENST00000457422 RHOBP62745 196 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 NHLH1Q02575 133 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 DIAPH2-AS1Q14236 149 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 C16orf82Q7Z2V1 217 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 OR9G1Q8NH87 305 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 VSTM2AQ8TAG5 236 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 NANPQ8TBE9 248 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 ABHD5Q8WTS1 349 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 PCGF1Q9BSM1 259 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 NDUFA4L2Q9NRX3 87 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 IGFBP2P18065 325 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 CHRNB4P30926 498 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 ATP5G3P48201 142 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 UBE2G2P60604 165 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 RPL8P62917 257 aaKnown RBP13.54□□□□□ -0.24
CCDC43-202ENST00000457422 ST6GALNAC3Q8NDV1 305 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 TMEM167AQ8TBQ9 72 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 DOK5Q9P104 306 aa13.54□□□□□ -0.24
CCDC43-202ENST00000457422 IGHV1-8P0DP01 117 aa13.53□□□□□ -0.24
CCDC43-202ENST00000457422 GNB1P62873 340 aa13.53□□□□□ -0.24
CCDC43-202ENST00000457422 C11orf42Q8N5U0 333 aa13.53□□□□□ -0.24
CCDC43-202ENST00000457422 ANAPC16Q96DE5 110 aa13.53□□□□□ -0.24
CCDC43-202ENST00000457422 FAM122AQ96E09 287 aa13.53□□□□□ -0.24
CCDC43-202ENST00000457422 PYGO2Q9BRQ0 406 aa13.53□□□□□ -0.24
CCDC43-202ENST00000457422 TCEAL7Q9BRU2 100 aa13.53□□□□□ -0.24
CCDC43-202ENST00000457422 COMMD5Q9GZQ3 224 aa13.53□□□□□ -0.24
CCDC43-202ENST00000457422 CCL21O00585 134 aa13.52□□□□□ -0.24
CCDC43-202ENST00000457422 SIAH2O43255 324 aa13.52□□□□□ -0.24
CCDC43-202ENST00000457422 PFN1P07737 140 aaKnown RBP13.52□□□□□ -0.24
CCDC43-202ENST00000457422 LINC00869P0C866 280 aa13.52□□□□□ -0.24
CCDC43-202ENST00000457422 SMIM6P0DI80 62 aa13.52□□□□□ -0.24
CCDC43-202ENST00000457422 SEPSECSQ9HD40 501 aaKnown RBP13.52□□□□□ -0.24
CCDC43-202ENST00000457422 SLC45A2Q9UMX9 530 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms