RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 SURF2Q15527 256 aaPredicted RBP17.82■□□□□ 0.44
CBX3-204ENST00000456948 OR4D10Q8NGI6 311 aa17.82■□□□□ 0.44
CBX3-204ENST00000456948 OR5B3Q8NH48 314 aa17.82■□□□□ 0.44
CBX3-204ENST00000456948 CXorf58Q96LI9 332 aa17.82■□□□□ 0.44
CBX3-204ENST00000456948 HINT2Q9BX68 163 aa17.82■□□□□ 0.44
CBX3-204ENST00000456948 SCP2D1Q9UJQ7 156 aa17.82■□□□□ 0.44
CBX3-204ENST00000456948 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.81■□□□□ 0.44
CBX3-204ENST00000456948 TEX50A0A1B0GTY4 177 aa17.81■□□□□ 0.44
CBX3-204ENST00000456948 RBMXL2O75526 392 aaKnown RBP17.81■□□□□ 0.44
CBX3-204ENST00000456948 CTSDP07339 412 aaPredicted RBP17.81■□□□□ 0.44
CBX3-204ENST00000456948 PI3P19957 117 aa17.81■□□□□ 0.44
CBX3-204ENST00000456948 KLF5Q13887 457 aaPredicted RBP17.81■□□□□ 0.44
CBX3-204ENST00000456948 LSM10Q969L4 123 aaKnown RBP17.81■□□□□ 0.44
CBX3-204ENST00000456948 EEF1AKMT3Q96AZ1 226 aa17.81■□□□□ 0.44
CBX3-204ENST00000456948 ZNF256Q9Y2P7 627 aaPredicted RBP17.81■□□□□ 0.44
CBX3-204ENST00000456948 C3orf85A0A1B0GTC6 90 aa17.8■□□□□ 0.44
CBX3-204ENST00000456948 WI2-2373I1.2A0A1W2PRP0 233 aa17.8■□□□□ 0.44
CBX3-204ENST00000456948 K7EIL1 84 aa17.8■□□□□ 0.44
CBX3-204ENST00000456948 MYOD1P15172 320 aa17.8■□□□□ 0.44
CBX3-204ENST00000456948 FAUP35544 74 aaKnown RBP17.8■□□□□ 0.44
CBX3-204ENST00000456948 AP3S2P59780 193 aa17.8■□□□□ 0.44
CBX3-204ENST00000456948 DEFA5Q01523 94 aa17.8■□□□□ 0.44
CBX3-204ENST00000456948 PYDC2Q56P42 97 aa17.8■□□□□ 0.44
CBX3-204ENST00000456948 OR1L6Q8NGR2 347 aa17.8■□□□□ 0.44
CBX3-204ENST00000456948 OR13C8Q8NGS7 320 aa17.8■□□□□ 0.44
CBX3-204ENST00000456948 MARCH1Q8TCQ1 289 aa17.8■□□□□ 0.44
CBX3-204ENST00000456948 SOSTQ9BQB4 213 aa17.8■□□□□ 0.44
CBX3-204ENST00000456948 PEMTQ9UBM1 199 aa17.8■□□□□ 0.44
CBX3-204ENST00000456948 SORL1Q92673 2214 aa17.79■□□□□ 0.44
CBX3-204ENST00000456948 A0A1B0GW64 132 aa17.79■□□□□ 0.44
CBX3-204ENST00000456948 ANKRD20A5PA0PJZ0 165 aa17.79■□□□□ 0.44
CBX3-204ENST00000456948 LY86O95711 162 aa17.79■□□□□ 0.44
CBX3-204ENST00000456948 REG1AP05451 166 aa17.79■□□□□ 0.44
CBX3-204ENST00000456948 OR13C7P0DN81 318 aa17.79■□□□□ 0.44
CBX3-204ENST00000456948 MECP2P51608 486 aaKnown RBP17.79■□□□□ 0.44
CBX3-204ENST00000456948 TRIM16LQ309B1 348 aa17.79■□□□□ 0.44
CBX3-204ENST00000456948 OR4C16Q8NGL9 310 aa17.79■□□□□ 0.44
CBX3-204ENST00000456948 OR9G4Q8NGQ1 327 aa17.79■□□□□ 0.44
CBX3-204ENST00000456948 SEC22AQ96IW7 307 aa17.79■□□□□ 0.44
CBX3-204ENST00000456948 THAP7Q9BT49 309 aaPredicted RBP17.79■□□□□ 0.44
CBX3-204ENST00000456948 NDUFA4L2Q9NRX3 87 aa17.79■□□□□ 0.44
CBX3-204ENST00000456948 NDUFA13Q9P0J0 144 aa17.79■□□□□ 0.44
CBX3-204ENST00000456948 TRBV7-1A0A0A6YYK4 115 aa17.78■□□□□ 0.44
CBX3-204ENST00000456948 TEX13DA0A0J9YY54 714 aaPredicted RBP17.78■□□□□ 0.44
CBX3-204ENST00000456948 IGLC7A0M8Q6 106 aa17.78■□□□□ 0.44
CBX3-204ENST00000456948 AKR1C2P52895 323 aa17.78■□□□□ 0.44
CBX3-204ENST00000456948 SYNJ2BPP57105 145 aa17.78■□□□□ 0.44
CBX3-204ENST00000456948 KLK9Q2XQG4 91 aa17.78■□□□□ 0.44
CBX3-204ENST00000456948 MRGPRFQ96AM1 343 aa17.78■□□□□ 0.44
CBX3-204ENST00000456948 RRNAD1Q96FB5 475 aaKnown RBP17.78■□□□□ 0.44
CBX3-204ENST00000456948 FANCD2OSQ96PS1 177 aa17.78■□□□□ 0.44
CBX3-204ENST00000456948 RBM38Q9H0Z9 239 aaKnown RBP17.78■□□□□ 0.44
CBX3-204ENST00000456948 TMEM14BQ9NUH8 114 aa17.78■□□□□ 0.44
CBX3-204ENST00000456948 MCUBQ9NWR8 336 aa17.78■□□□□ 0.44
CBX3-204ENST00000456948 KLK9Q9UKQ9 250 aa17.78■□□□□ 0.44
CBX3-204ENST00000456948 NSG2Q9Y328 171 aa17.78■□□□□ 0.44
CBX3-204ENST00000456948 CGB1A6NKQ9 187 aa17.77■□□□□ 0.44
CBX3-204ENST00000456948 C15orf61A6NNL5 157 aa17.77■□□□□ 0.44
CBX3-204ENST00000456948 GGCTO75223 188 aaKnown RBP17.77■□□□□ 0.44
CBX3-204ENST00000456948 SPANXN2Q5MJ10 180 aa17.77■□□□□ 0.44
CBX3-204ENST00000456948 FAAP20Q6NZ36 180 aa17.77■□□□□ 0.44
CBX3-204ENST00000456948 GDPD1Q8N9F7 314 aa17.77■□□□□ 0.44
CBX3-204ENST00000456948 RNASE11Q8TAA1 199 aaKnown RBP17.77■□□□□ 0.44
CBX3-204ENST00000456948 IGLV11-55A0A075B6I3 123 aa17.76■□□□□ 0.43
CBX3-204ENST00000456948 NDUFB8O95169 186 aa17.76■□□□□ 0.43
CBX3-204ENST00000456948 SLC25A24Q6NUK1 477 aa17.76■□□□□ 0.43
CBX3-204ENST00000456948 Q8N402 240 aa17.76■□□□□ 0.43
CBX3-204ENST00000456948 OR10W1Q8NGF6 305 aa17.76■□□□□ 0.43
CBX3-204ENST00000456948 OR51S1Q8NGJ8 323 aa17.76■□□□□ 0.43
CBX3-204ENST00000456948 PDCD10Q9BUL8 212 aa17.76■□□□□ 0.43
CBX3-204ENST00000456948 SLC2A8Q9NY64 477 aa17.76■□□□□ 0.43
CBX3-204ENST00000456948 DNAH3Q8TD57 4116 aa17.75■□□□□ 0.43
CBX3-204ENST00000456948 TRBV12-3P01733 135 aa17.75■□□□□ 0.43
CBX3-204ENST00000456948 DHODHQ02127 395 aa17.75■□□□□ 0.43
CBX3-204ENST00000456948 TP53RKQ96S44 253 aa17.75■□□□□ 0.43
CBX3-204ENST00000456948 KCNIP3Q9Y2W7 256 aa17.75■□□□□ 0.43
CBX3-204ENST00000456948 BMPR1BO00238 502 aa17.74■□□□□ 0.43
CBX3-204ENST00000456948 IGKV1-39P01597 117 aa17.74■□□□□ 0.43
CBX3-204ENST00000456948 IGKV1D-39P04432 117 aa17.74■□□□□ 0.43
CBX3-204ENST00000456948 ARL3P36405 182 aa17.74■□□□□ 0.43
CBX3-204ENST00000456948 HSPE1P61604 102 aaKnown RBP17.74■□□□□ 0.43
CBX3-204ENST00000456948 ERHP84090 104 aaKnown RBP17.74■□□□□ 0.43
CBX3-204ENST00000456948 FAM106AQ4KMX7 169 aa17.74■□□□□ 0.43
CBX3-204ENST00000456948 CLEC19AQ6UXS0 136 aa17.74■□□□□ 0.43
CBX3-204ENST00000456948 TOMM5Q8N4H5 51 aa17.74■□□□□ 0.43
CBX3-204ENST00000456948 DEDD2Q8WXF8 326 aa17.74■□□□□ 0.43
CBX3-204ENST00000456948 PRR25Q96S07 402 aa17.74■□□□□ 0.43
CBX3-204ENST00000456948 UCP1P25874 307 aa17.73■□□□□ 0.43
CBX3-204ENST00000456948 WT1-ASQ06250 92 aa17.73■□□□□ 0.43
CBX3-204ENST00000456948 SP6Q3SY56 376 aa17.73■□□□□ 0.43
CBX3-204ENST00000456948 C19orf35Q6ZS72 473 aa17.73■□□□□ 0.43
CBX3-204ENST00000456948 SGPP2Q8IWX5 399 aa17.73■□□□□ 0.43
CBX3-204ENST00000456948 VN1R17PQ8TDU5 208 aa17.73■□□□□ 0.43
CBX3-204ENST00000456948 RTBDNQ9BSG5 229 aaPredicted RBP17.73■□□□□ 0.43
CBX3-204ENST00000456948 NAA60Q9H7X0 242 aa17.73■□□□□ 0.43
CBX3-204ENST00000456948 SIGLEC8Q9NYZ4 499 aa17.73■□□□□ 0.43
CBX3-204ENST00000456948 GPR132Q9UNW8 380 aa17.73■□□□□ 0.43
CBX3-204ENST00000456948 F11RQ9Y624 299 aaKnown RBP17.73■□□□□ 0.43
CBX3-204ENST00000456948 PIGBOS1A0A0B4J2F0 54 aa17.72■□□□□ 0.43
CBX3-204ENST00000456948 CD69Q07108 199 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms