RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 A0A1B0GW64 132 aa13.89□□□□□ -0.19
PDLIM2-215ENST00000456545 GSTZ1O43708 216 aaPredicted RBP13.89□□□□□ -0.19
PDLIM2-215ENST00000456545 ATG12O94817 140 aa13.89□□□□□ -0.19
PDLIM2-215ENST00000456545 CTRB1P17538 263 aa13.89□□□□□ -0.19
PDLIM2-215ENST00000456545 CTRB2Q6GPI1 263 aa13.89□□□□□ -0.19
PDLIM2-215ENST00000456545 C19orf35Q6ZS72 473 aa13.89□□□□□ -0.19
PDLIM2-215ENST00000456545 HSD17B13Q7Z5P4 300 aaPredicted RBP13.89□□□□□ -0.19
PDLIM2-215ENST00000456545 CADM3Q8N126 398 aa13.89□□□□□ -0.19
PDLIM2-215ENST00000456545 OR6Q1Q8NGQ2 317 aa13.89□□□□□ -0.19
PDLIM2-215ENST00000456545 OR13C8Q8NGS7 320 aa13.89□□□□□ -0.19
PDLIM2-215ENST00000456545 TMEM56Q96MV1 263 aa13.89□□□□□ -0.19
PDLIM2-215ENST00000456545 PRRT1Q99946 306 aa13.89□□□□□ -0.19
PDLIM2-215ENST00000456545 THYN1Q9P016 225 aa13.89□□□□□ -0.19
PDLIM2-215ENST00000456545 ZNF256Q9Y2P7 627 aaPredicted RBP13.89□□□□□ -0.19
PDLIM2-215ENST00000456545 CGB1A6NKQ9 187 aa13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 ZNF701M0R085 212 aaPredicted RBP13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 NDUFB8O95169 186 aa13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 TRBV12-3P01733 135 aa13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 CTSDP07339 412 aaPredicted RBP13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 OR13C7P0DN81 318 aa13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 PTBP1P26599 531 aaKnown RBP eCLIP13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 SYNJ2BPP57105 145 aa13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 KLF5Q13887 457 aaPredicted RBP13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 TRIM16LQ309B1 348 aa13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 SLC25A24Q6NUK1 477 aa13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 OR10W1Q8NGF6 305 aa13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 OR4C16Q8NGL9 310 aa13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 MRGPRFQ96AM1 343 aa13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 EEF1AKMT3Q96AZ1 226 aa13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 PRR25Q96S07 402 aa13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 THAP7Q9BT49 309 aaPredicted RBP13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 MCUBQ9NWR8 336 aa13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 SCP2D1Q9UJQ7 156 aa13.88□□□□□ -0.19
PDLIM2-215ENST00000456545 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-215ENST00000456545 TEX13DA0A0J9YY54 714 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-215ENST00000456545 ANKRD20A5PA0PJZ0 165 aa13.87□□□□□ -0.19
PDLIM2-215ENST00000456545 H0Y980 276 aa13.87□□□□□ -0.19
PDLIM2-215ENST00000456545 AKR1C2P52895 323 aa13.87□□□□□ -0.19
PDLIM2-215ENST00000456545 RNASE11Q8TAA1 199 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-215ENST00000456545 LSM10Q969L4 123 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-215ENST00000456545 SEC22AQ96IW7 307 aa13.87□□□□□ -0.19
PDLIM2-215ENST00000456545 CXorf58Q96LI9 332 aa13.87□□□□□ -0.19
PDLIM2-215ENST00000456545 SCGB3A2Q96PL1 93 aa13.87□□□□□ -0.19
PDLIM2-215ENST00000456545 FANCD2OSQ96PS1 177 aa13.87□□□□□ -0.19
PDLIM2-215ENST00000456545 S4R3C0 116 aa13.87□□□□□ -0.19
PDLIM2-215ENST00000456545 IGLC7A0M8Q6 106 aa13.86□□□□□ -0.19
PDLIM2-215ENST00000456545 IGHV3-23P01764 117 aa13.86□□□□□ -0.19
PDLIM2-215ENST00000456545 SP6Q3SY56 376 aa13.86□□□□□ -0.19
PDLIM2-215ENST00000456545 CLEC19AQ6UXS0 136 aa13.86□□□□□ -0.19
PDLIM2-215ENST00000456545 OR51S1Q8NGJ8 323 aa13.86□□□□□ -0.19
PDLIM2-215ENST00000456545 OR9G4Q8NGQ1 327 aa13.86□□□□□ -0.19
PDLIM2-215ENST00000456545 OR5B3Q8NH48 314 aa13.86□□□□□ -0.19
PDLIM2-215ENST00000456545 TP53RKQ96S44 253 aa13.86□□□□□ -0.19
PDLIM2-215ENST00000456545 SOSTQ9BQB4 213 aa13.86□□□□□ -0.19
PDLIM2-215ENST00000456545 RBM38Q9H0Z9 239 aaKnown RBP13.86□□□□□ -0.19
PDLIM2-215ENST00000456545 NDUFA4L2Q9NRX3 87 aa13.86□□□□□ -0.19
PDLIM2-215ENST00000456545 PEMTQ9UBM1 199 aa13.86□□□□□ -0.19
PDLIM2-215ENST00000456545 C15orf61A6NNL5 157 aa13.85□□□□□ -0.19
PDLIM2-215ENST00000456545 GGCTO75223 188 aaKnown RBP13.85□□□□□ -0.19
PDLIM2-215ENST00000456545 B3GALNT1O75752 331 aa13.85□□□□□ -0.19
PDLIM2-215ENST00000456545 IGKV1-39P01597 117 aa13.85□□□□□ -0.19
PDLIM2-215ENST00000456545 IGKV1D-39P04432 117 aa13.85□□□□□ -0.19
PDLIM2-215ENST00000456545 FAUP35544 74 aaKnown RBP13.85□□□□□ -0.19
PDLIM2-215ENST00000456545 AP3S2P59780 193 aa13.85□□□□□ -0.19
PDLIM2-215ENST00000456545 SURF2Q15527 256 aaPredicted RBP13.85□□□□□ -0.19
PDLIM2-215ENST00000456545 RRNAD1Q96FB5 475 aaKnown RBP13.85□□□□□ -0.19
PDLIM2-215ENST00000456545 IGLV11-55A0A075B6I3 123 aa13.84□□□□□ -0.19
PDLIM2-215ENST00000456545 TRBV7-1A0A0A6YYK4 115 aa13.84□□□□□ -0.19
PDLIM2-215ENST00000456545 PPP5D1E7EU14 171 aa13.84□□□□□ -0.19
PDLIM2-215ENST00000456545 BMPR1BO00238 502 aa13.84□□□□□ -0.19
PDLIM2-215ENST00000456545 ARL3P36405 182 aa13.84□□□□□ -0.19
PDLIM2-215ENST00000456545 SPANXN2Q5MJ10 180 aa13.84□□□□□ -0.19
PDLIM2-215ENST00000456545 Q8N402 240 aa13.84□□□□□ -0.19
PDLIM2-215ENST00000456545 TOMM5Q8N4H5 51 aa13.84□□□□□ -0.19
PDLIM2-215ENST00000456545 GDPD1Q8N9F7 314 aa13.84□□□□□ -0.19
PDLIM2-215ENST00000456545 OR1L6Q8NGR2 347 aa13.84□□□□□ -0.19
PDLIM2-215ENST00000456545 PDCD10Q9BUL8 212 aa13.84□□□□□ -0.19
PDLIM2-215ENST00000456545 TMEM14BQ9NUH8 114 aa13.84□□□□□ -0.19
PDLIM2-215ENST00000456545 SPNP16150 400 aa13.83□□□□□ -0.2
PDLIM2-215ENST00000456545 WT1-ASQ06250 92 aa13.83□□□□□ -0.2
PDLIM2-215ENST00000456545 RTBDNQ9BSG5 229 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-215ENST00000456545 NDUFA13Q9P0J0 144 aa13.83□□□□□ -0.2
PDLIM2-215ENST00000456545 GPR132Q9UNW8 380 aa13.83□□□□□ -0.2
PDLIM2-215ENST00000456545 KCNIP3Q9Y2W7 256 aa13.83□□□□□ -0.2
PDLIM2-215ENST00000456545 OR2C1O95371 312 aa13.82□□□□□ -0.2
PDLIM2-215ENST00000456545 IFNA17P01571 189 aa13.82□□□□□ -0.2
PDLIM2-215ENST00000456545 CLEC3BP05452 202 aa13.82□□□□□ -0.2
PDLIM2-215ENST00000456545 INPP1P49441 399 aa13.82□□□□□ -0.2
PDLIM2-215ENST00000456545 HSPE1P61604 102 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-215ENST00000456545 ERHP84090 104 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-215ENST00000456545 DHODHQ02127 395 aa13.82□□□□□ -0.2
PDLIM2-215ENST00000456545 CD69Q07108 199 aa13.82□□□□□ -0.2
PDLIM2-215ENST00000456545 FAM106AQ4KMX7 169 aa13.82□□□□□ -0.2
PDLIM2-215ENST00000456545 SGPP2Q8IWX5 399 aa13.82□□□□□ -0.2
PDLIM2-215ENST00000456545 NAA60Q9H7X0 242 aa13.82□□□□□ -0.2
PDLIM2-215ENST00000456545 ZNF320A2RRD8 509 aa13.81□□□□□ -0.2
PDLIM2-215ENST00000456545 DBX1A6NMT0 343 aa13.81□□□□□ -0.2
PDLIM2-215ENST00000456545 HLA-AP01891 365 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-215ENST00000456545 OR5AC1P0C628 307 aa13.81□□□□□ -0.2
PDLIM2-215ENST00000456545 UCP1P25874 307 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms