RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 TMEM183BQ1AE95 376 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 FER1L6-AS1Q8NA97 138 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 OR1B1Q8NGR6 318 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 CHRDL1Q9BU40 450 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 RYDENQ9NUL5 291 aaKnown RBP3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 POLR1DQ9Y2S0 133 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 FBLL1A6NHQ2 334 aaKnown RBP3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 GNG7O60262 68 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 RFPL3SP0C7P2 107 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 EIF4EBP1Q13541 118 aaPredicted RBP3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 TREML4Q6UXN2 200 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 Q6ZS52 159 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 TSTD1Q8NFU3 115 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 OR8B3Q8NGG8 313 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 OR8B2Q96RD0 313 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 GGTLC1Q9BX51 225 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 RAB11FIP5Q9BXF6 653 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 FNDC4Q9H6D8 234 aaPredicted RBP3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 C7orf69Q9H7B7 122 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 WDR54Q9H977 334 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 IL23AQ9NPF7 189 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 ZNF355PQ9NSJ1 428 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 C1RLQ9NZP8 487 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 ZNRD1Q9P1U0 126 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 HSPB7Q9UBY9 170 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 WDR83OSQ9Y284 106 aa3.73□□□□□ -1.81
DEPDC1-202ENST00000456315 NPIPA5E9PKD4 350 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 S1PR2O95136 353 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 SMAGPQ0VAQ4 97 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 RFESDQ8TAC1 157 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 EAF1Q96JC9 268 aaPredicted RBP3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 CCDC3Q9BQI4 270 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 ZNF442Q9H7R0 627 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 PSENENQ9NZ42 101 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 PILRBQ9UKJ0 227 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 NPIPA1Q9UND3 350 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 MRPS16Q9Y3D3 137 aaKnown RBP3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 IGKV2D-26A0A0A0MRZ7 120 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 CTXND1A0A1B0GTU2 59 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 HBE1P02100 147 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 CRYBB3P26998 211 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 C9orf135Q5VTT2 229 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 SH2D6Q7Z4S9 175 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 OR2Z1Q8NG97 314 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 OR4C5Q8NGB2 326 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 THRSPQ92748 146 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 TNFRSF19Q9NS68 423 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 METRNQ9UJH8 293 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 BCL3P20749 454 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 HNRNPA3P51991 378 aaKnown RBP3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 WFDC2Q14508 124 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 CEACAM21Q3KPI0 293 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 FAM71F2Q6NXP2 309 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 BAGE3Q86Y29 109 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 BAGE2Q86Y30 109 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 PIGCQ92535 297 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 ABHD14BQ96IU4 210 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 MPC1Q9Y5U8 109 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 STAG3L2P0CL84 134 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 STAG3L3P0CL85 134 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 COLCA1Q6ZS62 124 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 C17orf82Q86X59 251 aaPredicted RBP3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 DEFB119Q8N690 84 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 SLC24A4Q8NFF2 622 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 MGST2Q99735 147 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 LRRC61Q9BV99 259 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 SAMD10Q9BYL1 202 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 SRXN1Q9BYN0 137 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 NAT8BQ9UHF3 227 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 WASHC3Q9Y3C0 194 aa3.72□□□□□ -1.81
DEPDC1-202ENST00000456315 FNDC10F2Z333 226 aa3.71□□□□□ -1.81
DEPDC1-202ENST00000456315 DHHO43323 396 aa3.71□□□□□ -1.81
DEPDC1-202ENST00000456315 PIAS2O75928 621 aa3.71□□□□□ -1.81
DEPDC1-202ENST00000456315 NRASP01111 189 aa3.71□□□□□ -1.81
DEPDC1-202ENST00000456315 P04436 131 aa3.71□□□□□ -1.81
DEPDC1-202ENST00000456315 TNFSF4P23510 183 aa3.71□□□□□ -1.81
DEPDC1-202ENST00000456315 TM4SF20Q53R12 229 aa3.71□□□□□ -1.81
DEPDC1-202ENST00000456315 C1orf210Q8IVY1 113 aa3.71□□□□□ -1.81
DEPDC1-202ENST00000456315 OR2T6Q8NHC8 308 aa3.71□□□□□ -1.81
DEPDC1-202ENST00000456315 TECTBQ96PL2 329 aa3.71□□□□□ -1.81
DEPDC1-202ENST00000456315 RBM7Q9Y580 266 aaKnown RBP3.71□□□□□ -1.81
DEPDC1-202ENST00000456315 MAST4O15021 2626 aa3.71□□□□□ -1.81
DEPDC1-202ENST00000456315 SPTY2D1-AS1A0A0U1RR47 76 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 A0A1W2PQD3 144 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 LNP1A1A4G5 178 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 H0Y980 276 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF134P52741 427 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 FOXF2Q12947 444 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 OR8B8Q15620 311 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 SPATA46Q5T0L3 261 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF596Q8TC21 504 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 GTSF1Q8WW33 167 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 KCNS1Q96KK3 526 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 CTSZQ9UBR2 303 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 IL19Q9UHD0 177 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 CDC42EP3Q9UKI2 254 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 INSIG2Q9Y5U4 225 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 G3V4G9 280 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 OR10J4P0C629 311 aa3.71□□□□□ -1.82
DEPDC1-202ENST00000456315 PPIFP30405 207 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms