RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 EXOSC2Q13868 293 aaKnown RBP13.31□□□□□ -0.28
USP39-208ENST00000455732 CCDC190Q86UF4 302 aa13.31□□□□□ -0.28
USP39-208ENST00000455732 ZNF429Q86V71 674 aa13.31□□□□□ -0.28
USP39-208ENST00000455732 OR1L8Q8NGR8 309 aa13.31□□□□□ -0.28
USP39-208ENST00000455732 MARCH1Q8TCQ1 289 aa13.31□□□□□ -0.28
USP39-208ENST00000455732 TRIM63Q969Q1 353 aa13.31□□□□□ -0.28
USP39-208ENST00000455732 NDUFA4L2Q9NRX3 87 aa13.31□□□□□ -0.28
USP39-208ENST00000455732 TMEM14BQ9NUH8 114 aa13.31□□□□□ -0.28
USP39-208ENST00000455732 COPZ2Q9P299 210 aa13.31□□□□□ -0.28
USP39-208ENST00000455732 IGLV11-55A0A075B6I3 123 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 C3orf85A0A1B0GTC6 90 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 TEX50A0A1B0GTY4 177 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 ANKRD34BA5PLL1 514 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 C15orf61A6NNL5 157 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 OR2J3O76001 311 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 TRAPPC2P0DI81 140 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 TRAPPC2BP0DI82 140 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 ZNF79Q15937 498 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 C15orf32Q32M92 178 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 ACSM6Q6P461 480 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 C19orf35Q6ZS72 473 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 OR5B3Q8NH48 314 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 TP53RKQ96S44 253 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 THAP7Q9BT49 309 aaPredicted RBP13.3□□□□□ -0.28
USP39-208ENST00000455732 FKBP11Q9NYL4 201 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 NDUFA13Q9P0J0 144 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 DNAH9Q9NYC9 4486 aa13.3□□□□□ -0.28
USP39-208ENST00000455732 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.29□□□□□ -0.28
USP39-208ENST00000455732 TRBV12-3P01733 135 aa13.29□□□□□ -0.28
USP39-208ENST00000455732 ETV6P41212 452 aa13.29□□□□□ -0.28
USP39-208ENST00000455732 KLF5Q13887 457 aaPredicted RBP13.29□□□□□ -0.28
USP39-208ENST00000455732 DEFB121Q5J5C9 76 aa13.29□□□□□ -0.28
USP39-208ENST00000455732 OR51S1Q8NGJ8 323 aa13.29□□□□□ -0.28
USP39-208ENST00000455732 LSM10Q969L4 123 aaKnown RBP13.29□□□□□ -0.28
USP39-208ENST00000455732 RTBDNQ9BSG5 229 aaPredicted RBP13.29□□□□□ -0.28
USP39-208ENST00000455732 C5orf66Q9H5L9 145 aa13.29□□□□□ -0.28
USP39-208ENST00000455732 FBXL7Q9UJT9 491 aa13.29□□□□□ -0.28
USP39-208ENST00000455732 GPR132Q9UNW8 380 aa13.29□□□□□ -0.28
USP39-208ENST00000455732 C14orf166Q9Y224 244 aaKnown RBP13.29□□□□□ -0.28
USP39-208ENST00000455732 NSG2Q9Y328 171 aa13.29□□□□□ -0.28
USP39-208ENST00000455732 OR51B2Q9Y5P1 312 aa13.29□□□□□ -0.28
USP39-208ENST00000455732 REG1AP05451 166 aa13.28□□□□□ -0.28
USP39-208ENST00000455732 P0C879 139 aa13.28□□□□□ -0.28
USP39-208ENST00000455732 DEFA4P12838 97 aa13.28□□□□□ -0.28
USP39-208ENST00000455732 UCP1P25874 307 aa13.28□□□□□ -0.28
USP39-208ENST00000455732 WT1-ASQ06250 92 aa13.28□□□□□ -0.28
USP39-208ENST00000455732 KLF9Q13886 244 aaPredicted RBP13.28□□□□□ -0.28
USP39-208ENST00000455732 PYDC2Q56P42 97 aa13.28□□□□□ -0.28
USP39-208ENST00000455732 H2BFWTQ7Z2G1 175 aa13.28□□□□□ -0.28
USP39-208ENST00000455732 Q8N402 240 aa13.28□□□□□ -0.28
USP39-208ENST00000455732 GDPD1Q8N9F7 314 aa13.28□□□□□ -0.28
USP39-208ENST00000455732 OR10W1Q8NGF6 305 aa13.28□□□□□ -0.28
USP39-208ENST00000455732 DEDD2Q8WXF8 326 aa13.28□□□□□ -0.28
USP39-208ENST00000455732 SCP2D1Q9UJQ7 156 aa13.28□□□□□ -0.28
USP39-208ENST00000455732 DBX1A6NMT0 343 aa13.27□□□□□ -0.29
USP39-208ENST00000455732 BMPR1BO00238 502 aa13.27□□□□□ -0.29
USP39-208ENST00000455732 SAP30O75446 220 aa13.27□□□□□ -0.29
USP39-208ENST00000455732 ATG12O94817 140 aa13.27□□□□□ -0.29
USP39-208ENST00000455732 AP3S2P59780 193 aa13.27□□□□□ -0.29
USP39-208ENST00000455732 ELOVL1Q9BW60 279 aa13.27□□□□□ -0.29
USP39-208ENST00000455732 DMRT1Q9Y5R6 373 aa13.27□□□□□ -0.29
USP39-208ENST00000455732 CYB5BO43169 146 aa13.26□□□□□ -0.29
USP39-208ENST00000455732 NDUFB8O95169 186 aa13.26□□□□□ -0.29
USP39-208ENST00000455732 IGKV1-5P01602 117 aa13.26□□□□□ -0.29
USP39-208ENST00000455732 OR13C7P0DN81 318 aa13.26□□□□□ -0.29
USP39-208ENST00000455732 FAUP35544 74 aaKnown RBP13.26□□□□□ -0.29
USP39-208ENST00000455732 RPEL1Q2QD12 228 aa13.26□□□□□ -0.29
USP39-208ENST00000455732 SPANXN2Q5MJ10 180 aa13.26□□□□□ -0.29
USP39-208ENST00000455732 OR6Q1Q8NGQ2 317 aa13.26□□□□□ -0.29
USP39-208ENST00000455732 OR4A16Q8NH70 328 aa13.26□□□□□ -0.29
USP39-208ENST00000455732 CCDC140Q96MF4 163 aa13.26□□□□□ -0.29
USP39-208ENST00000455732 TMEM56Q96MV1 263 aa13.26□□□□□ -0.29
USP39-208ENST00000455732 SCGB3A2Q96PL1 93 aa13.26□□□□□ -0.29
USP39-208ENST00000455732 TMEM222Q9H0R3 208 aa13.26□□□□□ -0.29
USP39-208ENST00000455732 NAA60Q9H7X0 242 aa13.26□□□□□ -0.29
USP39-208ENST00000455732 THYN1Q9P016 225 aa13.26□□□□□ -0.29
USP39-208ENST00000455732 LSM4Q9Y4Z0 139 aaKnown RBP13.26□□□□□ -0.29
USP39-208ENST00000455732 CRYM-AS1A6NIL9 109 aa13.25□□□□□ -0.29
USP39-208ENST00000455732 AKR1C2P52895 323 aa13.25□□□□□ -0.29
USP39-208ENST00000455732 SYNJ2BPP57105 145 aa13.25□□□□□ -0.29
USP39-208ENST00000455732 DCTN2Q13561 401 aaKnown RBP13.25□□□□□ -0.29
USP39-208ENST00000455732 TRIM16LQ309B1 348 aa13.25□□□□□ -0.29
USP39-208ENST00000455732 SP6Q3SY56 376 aa13.25□□□□□ -0.29
USP39-208ENST00000455732 TOMM5Q8N4H5 51 aa13.25□□□□□ -0.29
USP39-208ENST00000455732 OR9G4Q8NGQ1 327 aa13.25□□□□□ -0.29
USP39-208ENST00000455732 EEF1AKMT3Q96AZ1 226 aa13.25□□□□□ -0.29
USP39-208ENST00000455732 CXorf58Q96LI9 332 aa13.25□□□□□ -0.29
USP39-208ENST00000455732 OR4C12Q96R67 309 aa13.25□□□□□ -0.29
USP39-208ENST00000455732 PRR25Q96S07 402 aa13.25□□□□□ -0.29
USP39-208ENST00000455732 MCUBQ9NWR8 336 aa13.25□□□□□ -0.29
USP39-208ENST00000455732 ZNF256Q9Y2P7 627 aaPredicted RBP13.25□□□□□ -0.29
USP39-208ENST00000455732 F11RQ9Y624 299 aaKnown RBP13.25□□□□□ -0.29
USP39-208ENST00000455732 TRBV7-1A0A0A6YYK4 115 aa13.24□□□□□ -0.29
USP39-208ENST00000455732 TEX13DA0A0J9YY54 714 aaPredicted RBP13.24□□□□□ -0.29
USP39-208ENST00000455732 MFSD2BA6NFX1 497 aa13.24□□□□□ -0.29
USP39-208ENST00000455732 CDS2O95674 445 aa13.24□□□□□ -0.29
USP39-208ENST00000455732 OR5AC1P0C628 307 aa13.24□□□□□ -0.29
USP39-208ENST00000455732 HSPE1P61604 102 aaKnown RBP13.24□□□□□ -0.29
USP39-208ENST00000455732 PRCDQ00LT1 54 aa13.24□□□□□ -0.29
USP39-208ENST00000455732 TATDN3Q17R31 274 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms