RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 RCHY1Q96PM5 261 aa7.35□□□□□ -1.23
USP54-207ENST00000451492 PLEKHA3Q9HB20 300 aa7.35□□□□□ -1.23
USP54-207ENST00000451492 C2orf70A6NJV1 201 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 SNAPC5O75971 98 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 FOLR2P14207 255 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 ALDH3B2P48448 385 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 CD81P60033 236 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 WT1-ASQ06250 92 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 GUCA2BQ16661 112 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 CD300EQ496F6 205 aaPredicted RBP7.34□□□□□ -1.23
USP54-207ENST00000451492 SPINK9Q5DT21 86 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 LPCAT3Q6P1A2 487 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 ADAMTSL5Q6ZMM2 481 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 SLC38A6Q8IZM9 456 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 Q8N1Y9 231 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 GDPD1Q8N9F7 314 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 UBAC2Q8NBM4 344 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 OR4D10Q8NGI6 311 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 OR1L8Q8NGR8 309 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 LSM10Q969L4 123 aaKnown RBP7.34□□□□□ -1.23
USP54-207ENST00000451492 WDR89Q96FK6 387 aaPredicted RBP7.34□□□□□ -1.23
USP54-207ENST00000451492 WFDC10AQ9H1F0 79 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 MIXL1Q9H2W2 232 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 TUBA4BQ9H853 241 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 ZMAT4Q9H898 229 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 DMRT1Q9Y5R6 373 aa7.34□□□□□ -1.23
USP54-207ENST00000451492 IGHV3OR16-8A0A075B7F1 116 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 TRBV7-1A0A0A6YYK4 115 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 OR2T8A6NH00 312 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 DBX1A6NMT0 343 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 C15orf61A6NNL5 157 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 CTDSP2O14595 271 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 NOL3O60936 208 aaKnown RBP7.33□□□□□ -1.24
USP54-207ENST00000451492 IGKV1-39P01597 117 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 IGKV1D-39P04432 117 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 CLEC3BP05452 202 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 SERPINE2P07093 398 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 IL18Q14116 193 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 IZUMO4Q1ZYL8 232 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 FAM209BQ5JX69 171 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 PLET1Q6UQ28 207 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 H2BFWTQ7Z2G1 175 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 OR4A16Q8NH70 328 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 CXorf58Q96LI9 332 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 ABHD1Q96SE0 405 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 C6orf62Q9GZU0 229 aaPredicted RBP7.33□□□□□ -1.24
USP54-207ENST00000451492 THYN1Q9P016 225 aa7.33□□□□□ -1.24
USP54-207ENST00000451492 CYB5BO43169 146 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 SCAF4O95104 1147 aaKnown RBP7.32□□□□□ -1.24
USP54-207ENST00000451492 RAB3DO95716 219 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 CD7P09564 240 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 AKR1C2P52895 323 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 MFAP2P55001 183 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 PIGPP57054 158 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 FAM106AQ4KMX7 169 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 TM4SF20Q53R12 229 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 Q56UQ5 140 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 THOC7Q6I9Y2 204 aaKnown RBP7.32□□□□□ -1.24
USP54-207ENST00000451492 BTNL8Q6UX41 500 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 UNQ9165/PRO28630Q6UXU0 137 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 ZNF502Q8TBZ5 544 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 MARCH1Q8TCQ1 289 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 MISP3Q96FF7 219 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 SEC22AQ96IW7 307 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 TMEM56Q96MV1 263 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 TP53RKQ96S44 253 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 TSC22D3Q99576 134 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 NEURL2Q9BR09 285 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 RETNQ9HD89 108 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 NDUFA4L2Q9NRX3 87 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 SIGLEC8Q9NYZ4 499 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 MTFP1Q9UDX5 166 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 MLXQ9UH92 298 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 PRNDQ9UKY0 176 aa7.32□□□□□ -1.24
USP54-207ENST00000451492 F11RQ9Y624 299 aaKnown RBP7.32□□□□□ -1.24
USP54-207ENST00000451492 KMT2CQ8NEZ4 4911 aaKnown RBP7.32□□□□□ -1.24
USP54-207ENST00000451492 TMEM213A2RRL7 107 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 TGOLN2O43493 480 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 ZNF207O43670 478 aaKnown RBP7.31□□□□□ -1.24
USP54-207ENST00000451492 IGHV3-48P01763 117 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 CBLN1P23435 193 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 UCP3P55916 312 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 TAS2R19P59542 299 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 TRIM16LQ309B1 348 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 DEFB114Q30KQ6 69 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 SP6Q3SY56 376 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 STEAP1BQ6NZ63 245 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 LHFPL1Q86WI0 220 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 GPHB5Q86YW7 130 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 DEFB125Q8N687 156 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 TMEM229BQ8NBD8 167 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 UXS1Q8NBZ7 420 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 OR13C8Q8NGS7 320 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 OR2K2Q8NGT1 345 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 RNASE11Q8TAA1 199 aaKnown RBP7.31□□□□□ -1.24
USP54-207ENST00000451492 RAB2BQ8WUD1 216 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 PINX1Q96BK5 328 aaKnown RBP7.31□□□□□ -1.24
USP54-207ENST00000451492 DIRAS2Q96HU8 199 aa7.31□□□□□ -1.24
USP54-207ENST00000451492 SRSF8Q9BRL6 282 aaKnown RBP7.31□□□□□ -1.24
USP54-207ENST00000451492 THAP7Q9BT49 309 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms