RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 PNRC2Q9NPJ4 139 aaKnown RBP8.74□□□□□ -1.01
CTC1-202ENST00000449476 SS18L1O75177 396 aaPredicted RBP8.74□□□□□ -1.01
CTC1-202ENST00000449476 MGPP08493 103 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 CBLN1P23435 193 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 DDTP30046 118 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 FAM209BQ5JX69 171 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 WDR82Q6UXN9 313 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 ZMAT5Q9UDW3 170 aaKnown RBP8.74□□□□□ -1.01
CTC1-202ENST00000449476 CLDN16Q9Y5I7 305 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 APOBEC3AP31941 199 aaPredicted RBP8.74□□□□□ -1.01
CTC1-202ENST00000449476 LBHQ53QV2 105 aaPredicted RBP8.74□□□□□ -1.01
CTC1-202ENST00000449476 OR4D5Q8NGN0 318 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 ZCCHC14Q8WYQ9 949 aaKnown RBP8.74□□□□□ -1.01
CTC1-202ENST00000449476 SDF2L1Q9HCN8 221 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 TFF1P04155 84 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 AMY1AP04745 511 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 KIR2DL2P43627 348 aaPredicted RBP8.74□□□□□ -1.01
CTC1-202ENST00000449476 ATP5G3P48201 142 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 TWIST1Q15672 202 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 FAM90A1Q86YD7 464 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 SRSF12Q8WXF0 261 aaKnown RBP8.74□□□□□ -1.01
CTC1-202ENST00000449476 CDC42EP3Q9UKI2 254 aa8.74□□□□□ -1.01
CTC1-202ENST00000449476 LOC105371242A0A075B767 164 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 CD55P08174 381 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 DGAT2L7PQ6IED9 249 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 FANCMQ8IYD8 2048 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 TRAV30A0A087WSZ9 112 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 ZNF324BQ6AW86 544 aaPredicted RBP8.73□□□□□ -1.01
CTC1-202ENST00000449476 CLEC2AQ6UVW9 174 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 SCGB1D4Q6XE38 83 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 LINC00305Q7Z4B0 112 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 ABHD17AQ96GS6 310 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 ELOVL1Q9BW60 279 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 TUBA4BQ9H853 241 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 WFDC1Q9HC57 220 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 SPRR3Q9UBC9 169 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 A0A087WWC5 75 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 RAMP3O60896 148 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 LEPROTL1O95214 131 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 PF4V1P10720 104 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 BSPH1Q075Z2 132 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 ICAM4Q14773 271 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 RTN4RL2Q86UN3 420 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 OR4B1Q8NGF8 309 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 FAM57AQ8TBR7 257 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 MYOZ3Q8TDC0 251 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 TRBV23-1A0A0A0MS06 115 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 IGHV3-35A0A0C4DH35 117 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 RPL7P18124 248 aaKnown RBP8.73□□□□□ -1.01
CTC1-202ENST00000449476 CKS2P33552 79 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 MAS1LP35410 378 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 LCN2P80188 198 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 RBPMS2Q6ZRY4 209 aaKnown RBP8.73□□□□□ -1.01
CTC1-202ENST00000449476 GOLT1AQ6ZVE7 132 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 TMEM183AQ8IXX5 376 aa8.73□□□□□ -1.01
CTC1-202ENST00000449476 SLC17A3O00476 420 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 YPEL1O60688 119 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 CEACAM1P13688 526 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 GFRA1P56159 465 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 CCL20P78556 96 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 COL5A1-AS1Q5SY13 56 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 C16orf92Q96LL3 132 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 YPEL2Q96QA6 119 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 DMRT1Q9Y5R6 373 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 TTC28Q96AY4 2481 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 SCO2A0A1W2PP80 73 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 CGB1A6NKQ9 187 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 C17orf100A8MU93 164 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 E9PQ18 207 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 IL4P05112 153 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 NBEAP1P0C6P0 100 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 CD59P13987 128 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 QRFPP83859 136 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 METTL26Q96S19 204 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 FBXL15Q9H469 300 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 CYTL1Q9NRR1 136 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 GATA2P23769 480 aaPredicted RBP8.72□□□□□ -1.01
CTC1-202ENST00000449476 GPX4P36969 197 aaPredicted RBP8.72□□□□□ -1.01
CTC1-202ENST00000449476 MEF2CQ06413 473 aaPredicted RBP8.72□□□□□ -1.01
CTC1-202ENST00000449476 PMCHL1Q16048 86 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 MORN2Q502X0 79 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 MRPL20Q9BYC9 149 aaKnown RBP8.72□□□□□ -1.01
CTC1-202ENST00000449476 CADP27708 2225 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 NPIPB11E5RHQ5 1161 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 CCL3L1P16619 93 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 SPATA45Q537H7 98 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 LINC00312Q9Y6C7 94 aa8.72□□□□□ -1.01
CTC1-202ENST00000449476 DOCK9Q9BZ29 2069 aa8.71□□□□□ -1.01
CTC1-202ENST00000449476 TRBV9A0A0B4J1U6 114 aa8.71□□□□□ -1.01
CTC1-202ENST00000449476 TCTAP57738 103 aa8.71□□□□□ -1.01
CTC1-202ENST00000449476 NEU1Q99519 415 aa8.71□□□□□ -1.01
CTC1-202ENST00000449476 NOTCH4Q99466 2003 aa8.71□□□□□ -1.01
CTC1-202ENST00000449476 SHANK1Q9Y566 2161 aa8.71□□□□□ -1.01
CTC1-202ENST00000449476 LRRK1Q38SD2 2015 aa8.71□□□□□ -1.02
CTC1-202ENST00000449476 RPL23P62829 140 aaKnown RBP8.71□□□□□ -1.02
CTC1-202ENST00000449476 Q0VFX4 171 aa8.71□□□□□ -1.02
CTC1-202ENST00000449476 ZFP30Q9Y2G7 519 aa8.71□□□□□ -1.02
CTC1-202ENST00000449476 SAA2-SAA4A0A096LPE2 208 aa8.71□□□□□ -1.02
CTC1-202ENST00000449476 SAA2P0DJI9 122 aaPredicted RBP8.71□□□□□ -1.02
CTC1-202ENST00000449476 OTX1P32242 354 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms