RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	YLPM1	P49750	1951 aa	Known RBP	13.84	□□□□□ -0.19
TOM1-210	ENST00000449058	BOD1L1	Q8NFC6	3051 aa		13.84	□□□□□ -0.19
TOM1-210	ENST00000449058	hADV38S2	A0JD32	116 aa		13.84	□□□□□ -0.19
TOM1-210	ENST00000449058	IGKV1-16	P04430	117 aa		13.84	□□□□□ -0.19
TOM1-210	ENST00000449058	C1QTNF9	P0C862	333 aa		13.84	□□□□□ -0.19
TOM1-210	ENST00000449058	PDLIM4	P50479	330 aa		13.84	□□□□□ -0.19
TOM1-210	ENST00000449058	RTL8B	Q17RB0	113 aa		13.84	□□□□□ -0.19
TOM1-210	ENST00000449058	SLC35D1	Q9NTN3	355 aa		13.84	□□□□□ -0.19
TOM1-210	ENST00000449058	CUL9	Q8IWT3	2517 aa		13.84	□□□□□ -0.19
TOM1-210	ENST00000449058	TRBV23-1	A0A0A0MS06	115 aa		13.83	□□□□□ -0.19
TOM1-210	ENST00000449058	SCO2	A0A1W2PP80	73 aa		13.83	□□□□□ -0.19
TOM1-210	ENST00000449058	XKRY2	A2RUG3	117 aa		13.83	□□□□□ -0.19
TOM1-210	ENST00000449058	PGPEP1L	A6NFU8	196 aa		13.83	□□□□□ -0.19
TOM1-210	ENST00000449058	SRRM4	A7MD48	611 aa	Known RBP	13.83	□□□□□ -0.19
TOM1-210	ENST00000449058		J3QR06	171 aa		13.83	□□□□□ -0.19
TOM1-210	ENST00000449058	LINC00869	P0C866	280 aa		13.83	□□□□□ -0.19
TOM1-210	ENST00000449058	IGFBP2	P18065	325 aa		13.83	□□□□□ -0.19
TOM1-210	ENST00000449058	FAM78B	Q5VT40	261 aa		13.83	□□□□□ -0.19
TOM1-210	ENST00000449058	TMEM108	Q6UXF1	575 aa		13.83	□□□□□ -0.19
TOM1-210	ENST00000449058	PLEKHA3	Q9HB20	300 aa		13.83	□□□□□ -0.19
TOM1-210	ENST00000449058	AMBP	P02760	352 aa		13.83	□□□□□ -0.2
TOM1-210	ENST00000449058	IL3RA	P26951	378 aa		13.83	□□□□□ -0.2
TOM1-210	ENST00000449058	FOXL1	Q12952	345 aa		13.83	□□□□□ -0.2
TOM1-210	ENST00000449058	FAM209B	Q5JX69	171 aa		13.83	□□□□□ -0.2
TOM1-210	ENST00000449058	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.83	□□□□□ -0.2
TOM1-210	ENST00000449058	SFRP2	Q96HF1	295 aa		13.83	□□□□□ -0.2
TOM1-210	ENST00000449058	TMEM204	Q9BSN7	226 aa		13.83	□□□□□ -0.2
TOM1-210	ENST00000449058	HINT2	Q9BX68	163 aa		13.83	□□□□□ -0.2
TOM1-210	ENST00000449058	CHODL	Q9H9P2	273 aa		13.83	□□□□□ -0.2
TOM1-210	ENST00000449058	ZNRD1	Q9P1U0	126 aa		13.83	□□□□□ -0.2
TOM1-210	ENST00000449058	CCL8	P80075	99 aa		13.82	□□□□□ -0.2
TOM1-210	ENST00000449058	ZNF833P	Q6ZTB9	187 aa		13.82	□□□□□ -0.2
TOM1-210	ENST00000449058	BTF3L4	Q96K17	158 aa		13.82	□□□□□ -0.2
TOM1-210	ENST00000449058	SLC45A2	Q9UMX9	530 aa		13.82	□□□□□ -0.2
TOM1-210	ENST00000449058	FUT9	Q9Y231	359 aa		13.82	□□□□□ -0.2
TOM1-210	ENST00000449058	ZNF292	O60281	2723 aa		13.82	□□□□□ -0.2
TOM1-210	ENST00000449058	TEX50	A0A1B0GTY4	177 aa		13.82	□□□□□ -0.2
TOM1-210	ENST00000449058	NKX6-3	A6NJ46	265 aa		13.82	□□□□□ -0.2
TOM1-210	ENST00000449058	KLK10	O43240	276 aa		13.82	□□□□□ -0.2
TOM1-210	ENST00000449058	TNFRSF1A	P19438	455 aa		13.82	□□□□□ -0.2
TOM1-210	ENST00000449058	RPL15	P61313	204 aa	Known RBP	13.82	□□□□□ -0.2
TOM1-210	ENST00000449058	ADIPOQ	Q15848	244 aa		13.82	□□□□□ -0.2
TOM1-210	ENST00000449058	C11orf52	Q96A22	123 aa		13.82	□□□□□ -0.2
TOM1-210	ENST00000449058	BET1L	Q9NYM9	111 aa		13.82	□□□□□ -0.2
TOM1-210	ENST00000449058		A0A0G2JNJ9	132 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	C17orf100	A8MU93	164 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	FOXH1	O75593	365 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	RD3L	P0DJH9	198 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	NDUFB7	P17568	137 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	ATP5I	P56385	69 aa	Predicted RBP	13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	MEF2C	Q06413	473 aa	Predicted RBP	13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	TMEM37	Q8WXS4	190 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058		Q9UFV3	132 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	DPRX	A6NFQ7	191 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	C16orf97	H3BN30	126 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	DVL1	O14640	695 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	MT-CO2	P00403	227 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	COL8A2	P25067	703 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	C2orf83	Q53S99	150 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	DOLPP1	Q86YN1	238 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	GAL3ST2	Q9H3Q3	398 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	FKBP11	Q9NYL4	201 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	ELOVL5	Q9NYP7	299 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	TP53TG5	Q9Y2B4	290 aa		13.81	□□□□□ -0.2
TOM1-210	ENST00000449058	MDFIC2	A0A1B0GVS7	189 aa		13.8	□□□□□ -0.2
TOM1-210	ENST00000449058	GAMT	Q14353	236 aa		13.8	□□□□□ -0.2
TOM1-210	ENST00000449058	OR5B3	Q8NH48	314 aa		13.8	□□□□□ -0.2
TOM1-210	ENST00000449058	OR5R1	Q8NH85	324 aa		13.8	□□□□□ -0.2
TOM1-210	ENST00000449058	OCC1	Q8TAD7	63 aa		13.8	□□□□□ -0.2
TOM1-210	ENST00000449058	FCN3	O75636	299 aa		13.8	□□□□□ -0.2
TOM1-210	ENST00000449058	OR4A8	P0C604	315 aa		13.8	□□□□□ -0.2
TOM1-210	ENST00000449058	SAA1	P0DJI8	122 aa	Predicted RBP	13.8	□□□□□ -0.2
TOM1-210	ENST00000449058	AREG	P15514	252 aa		13.8	□□□□□ -0.2
TOM1-210	ENST00000449058	RPL31	P62899	125 aa	Known RBP	13.8	□□□□□ -0.2
TOM1-210	ENST00000449058	C9orf152	Q5JTZ5	239 aa		13.8	□□□□□ -0.2
TOM1-210	ENST00000449058	OR4P4	Q8NGL7	312 aa		13.8	□□□□□ -0.2
TOM1-210	ENST00000449058	ARL2-SNX15	V9GYD0	113 aa		13.8	□□□□□ -0.2
TOM1-210	ENST00000449058	TNC	P24821	2201 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	IGKV1OR2-108	A0A075B7D4	117 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	TDGF1P3	P51864	188 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	TCF15	Q12870	199 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	JOSD1	Q15040	202 aa	Predicted RBP	13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	TEX38	Q6PEX7	206 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	MIR17HG	Q75NE6	70 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	WFDC8	Q8IUA0	241 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	OR1L8	Q8NGR8	309 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	OSR1	Q8TAX0	266 aa	Predicted RBP	13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	RND1	Q92730	232 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	FAM122A	Q96E09	287 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	MRPL20	Q9BYC9	149 aa	Known RBP	13.79	□□□□□ -0.2
TOM1-210	ENST00000449058		A0A0U1RQK1	487 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	ZNF320	A2RRD8	509 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	THBD	P07204	575 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	RNASE2	P10153	161 aa	Known RBP	13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	PRSS8	Q16651	343 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	MOB3B	Q86TA1	216 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	SGMS2	Q8NHU3	365 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	NABP2	Q9BQ15	211 aa		13.79	□□□□□ -0.2
TOM1-210	ENST00000449058	LRFN3	Q9BTN0	628 aa		13.79	□□□□□ -0.2

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