RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 PPP5D1E7EU14 171 aa9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 IGLV1-51P01701 117 aa9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 IGHV3-23P01764 117 aa9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 HIST1H1BP16401 226 aaKnown RBP9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 PTBP1P26599 531 aaKnown RBP eCLIP9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 PIGPP57054 158 aa9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 RND3P61587 244 aa9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 WT1-ASQ06250 92 aa9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 SCGB2B2Q4G0G5 96 aa9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 HAPLN4Q86UW8 402 aa9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 MCFD2Q8NI22 146 aa9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 ZNF486Q96H40 463 aaPredicted RBP9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 B9D2Q9BPU9 175 aa9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 SOSTQ9BQB4 213 aa9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 RABL2AQ9UBK7 228 aaPredicted RBP9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 RABL2BQ9UNT1 228 aa9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 OR51B2Q9Y5P1 312 aa9.72□□□□□ -0.85
PRPF40A-203ENST00000448428 HLA-AP01891 365 aaKnown RBP9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 SERPINE2P07093 398 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 CSN3P07498 182 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 OR13C7P0DN81 318 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 GP9P14770 177 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 PPP5CP53041 499 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 CD69Q07108 199 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 FAM209BQ5JX69 171 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 FAAP20Q6NZ36 180 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 CLEC19AQ6UXS0 136 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 H2BFWTQ7Z2G1 175 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 ZFAND1Q8TCF1 268 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 MARCH1Q8TCQ1 289 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 MRGPRFQ96AM1 343 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 CCDC140Q96MF4 163 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 HINT2Q9BX68 163 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 TMEM14BQ9NUH8 114 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 FKBP11Q9NYL4 201 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 PRNDQ9UKY0 176 aa9.71□□□□□ -0.86
PRPF40A-203ENST00000448428 FABP12A6NFH5 140 aa9.7□□□□□ -0.86
PRPF40A-203ENST00000448428 MFSD2BA6NFX1 497 aa9.7□□□□□ -0.86
PRPF40A-203ENST00000448428 CCDC160A6NGH7 325 aa9.7□□□□□ -0.86
PRPF40A-203ENST00000448428 GSTZ1O43708 216 aaPredicted RBP9.7□□□□□ -0.86
PRPF40A-203ENST00000448428 GGCTO75223 188 aaKnown RBP9.7□□□□□ -0.86
PRPF40A-203ENST00000448428 OR2C1O95371 312 aa9.7□□□□□ -0.86
PRPF40A-203ENST00000448428 MEF2DQ14814 521 aa9.7□□□□□ -0.86
PRPF40A-203ENST00000448428 THOC7Q6I9Y2 204 aaKnown RBP9.7□□□□□ -0.86
PRPF40A-203ENST00000448428 HSD17B13Q7Z5P4 300 aaPredicted RBP9.7□□□□□ -0.86
PRPF40A-203ENST00000448428 OR13C8Q8NGS7 320 aa9.7□□□□□ -0.86
PRPF40A-203ENST00000448428 EEF1AKMT3Q96AZ1 226 aa9.7□□□□□ -0.86
PRPF40A-203ENST00000448428 TP53RKQ96S44 253 aa9.7□□□□□ -0.86
PRPF40A-203ENST00000448428 TSC22D3Q99576 134 aa9.7□□□□□ -0.86
PRPF40A-203ENST00000448428 RSL24D1Q9UHA3 163 aaKnown RBP9.7□□□□□ -0.86
PRPF40A-203ENST00000448428 C3orf85A0A1B0GTC6 90 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 C15orf61A6NNL5 157 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 DISC1C4P0D8 188 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 H0Y980 276 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 CLEC3BP05452 202 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 CTSDP07339 412 aaPredicted RBP9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 AKAIN1P0CW23 69 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 MECP2P51608 486 aaKnown RBP9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 MFAP2P55001 183 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 IZUMO4Q1ZYL8 232 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 SP6Q3SY56 376 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 SLC25A24Q6NUK1 477 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 ADAMTSL5Q6ZMM2 481 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 GDPD1Q8N9F7 314 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 OR4C16Q8NGL9 310 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 OR5B3Q8NH48 314 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 OR4A16Q8NH70 328 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 LSM10Q969L4 123 aaKnown RBP9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 CXorf58Q96LI9 332 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 RTBDNQ9BSG5 229 aaPredicted RBP9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 RBM38Q9H0Z9 239 aaKnown RBP9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 SIGLEC8Q9NYZ4 499 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 COPZ2Q9P299 210 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 PEMTQ9UBM1 199 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 SMAD5-AS1Q9Y6J3 95 aa9.69□□□□□ -0.86
PRPF40A-203ENST00000448428 TRBV7-1A0A0A6YYK4 115 aa9.68□□□□□ -0.86
PRPF40A-203ENST00000448428 ANKRD20A5PA0PJZ0 165 aa9.68□□□□□ -0.86
PRPF40A-203ENST00000448428 IGKV1-5P01602 117 aa9.68□□□□□ -0.86
PRPF40A-203ENST00000448428 ARL3P36405 182 aa9.68□□□□□ -0.86
PRPF40A-203ENST00000448428 C11orf87Q6NUJ2 197 aa9.68□□□□□ -0.86
PRPF40A-203ENST00000448428 GPHB5Q86YW7 130 aa9.68□□□□□ -0.86
PRPF40A-203ENST00000448428 CCDC71LQ8N9Z2 235 aa9.68□□□□□ -0.86
PRPF40A-203ENST00000448428 ZNF502Q8TBZ5 544 aa9.68□□□□□ -0.86
PRPF40A-203ENST00000448428 TMEM56Q96MV1 263 aa9.68□□□□□ -0.86
PRPF40A-203ENST00000448428 THYN1Q9P016 225 aa9.68□□□□□ -0.86
PRPF40A-203ENST00000448428 GPR132Q9UNW8 380 aa9.68□□□□□ -0.86
PRPF40A-203ENST00000448428 F11RQ9Y624 299 aaKnown RBP9.68□□□□□ -0.86
PRPF40A-203ENST00000448428 IZUMO1RA6ND01 250 aa9.67□□□□□ -0.86
PRPF40A-203ENST00000448428 LGALS9O00182 355 aa9.67□□□□□ -0.86
PRPF40A-203ENST00000448428 P0C879 139 aa9.67□□□□□ -0.86
PRPF40A-203ENST00000448428 EDN2P20800 178 aa9.67□□□□□ -0.86
PRPF40A-203ENST00000448428 UCP1P25874 307 aa9.67□□□□□ -0.86
PRPF40A-203ENST00000448428 HSPE1P61604 102 aaKnown RBP9.67□□□□□ -0.86
PRPF40A-203ENST00000448428 Q8N1Y9 231 aa9.67□□□□□ -0.86
PRPF40A-203ENST00000448428 OR51S1Q8NGJ8 323 aa9.67□□□□□ -0.86
PRPF40A-203ENST00000448428 VN1R17PQ8TDU5 208 aa9.67□□□□□ -0.86
PRPF40A-203ENST00000448428 THAP7Q9BT49 309 aaPredicted RBP9.67□□□□□ -0.86
PRPF40A-203ENST00000448428 C5orf66Q9H5L9 145 aa9.67□□□□□ -0.86
PRPF40A-203ENST00000448428 ZC4H2Q9NQZ6 224 aa9.67□□□□□ -0.86
PRPF40A-203ENST00000448428 C14orf166Q9Y224 244 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms