RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 NPY1RP25929 384 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 LCN2P80188 198 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 DUX4L9Q6RFH8 374 aaPredicted RBP10.64□□□□□ -0.71
SHC1-210ENST00000448116 STPG3Q8N7X2 389 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 ITLN1Q8WWA0 313 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 FKBP11Q9NYL4 201 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 PRR33A8MZF0 331 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 SIAH2O43255 324 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 IGHG3P01860 377 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 TYMSP04818 313 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 GCHFRP30047 84 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 TRIP6Q15654 476 aaKnown RBP10.64□□□□□ -0.71
SHC1-210ENST00000448116 LRFN3Q9BTN0 628 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 SNHG12Q9BXW3 62 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 YPEL1O60688 119 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 CA2P00918 260 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 ADMP35318 185 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 MZT1Q08AG7 82 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 RAB31Q13636 194 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 EFNB3Q15768 340 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 TEPPQ6URK8 271 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 OR4S2Q8NH73 311 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 MS4A10Q96PG2 267 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 YPEL2Q96QA6 119 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 ELOVL5Q9NYP7 299 aa10.64□□□□□ -0.71
SHC1-210ENST00000448116 TMPRSS2O15393 492 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 IGFBP2P18065 325 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 LOXL3P58215 753 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 IQCJQ1A5X6 159 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 HLA-DRB5Q30154 266 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 MOB3BQ86TA1 216 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 GBGT1Q8N5D6 347 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 SLC24A4Q8NFF2 622 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 RAB1CQ92928 201 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 GCM1Q9NP62 436 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 BOD1L1Q8NFC6 3051 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 ITGB1BP1O14713 200 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 CGAP01215 116 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 GATA2P23769 480 aaPredicted RBP10.63□□□□□ -0.71
SHC1-210ENST00000448116 RPL15P61313 204 aaKnown RBP10.63□□□□□ -0.71
SHC1-210ENST00000448116 RHOBP62745 196 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 OR5I1Q13606 314 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 DEFB109BQ30KR1 87 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 LBHQ53QV2 105 aaPredicted RBP10.63□□□□□ -0.71
SHC1-210ENST00000448116 CT45A1Q5HYN5 189 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 OR4A47Q6IF82 309 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 CT45A3Q8NHU0 189 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 FAM216AQ8WUB2 273 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 ZNF71Q9NQZ8 489 aaPredicted RBP10.63□□□□□ -0.71
SHC1-210ENST00000448116 TRAV17A0A0B4J275 112 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 AHRRA9YTQ3 701 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 WT1P19544 449 aaPredicted RBP10.63□□□□□ -0.71
SHC1-210ENST00000448116 CCKARP32238 428 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 PDLIM4P50479 330 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 BATFQ16520 125 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 STARD4Q96DR4 205 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 ZNRD1Q9P1U0 126 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 ARFGEF3Q5TH69 2177 aa10.63□□□□□ -0.71
SHC1-210ENST00000448116 YLPM1P49750 1951 aaKnown RBP10.62□□□□□ -0.71
SHC1-210ENST00000448116 SAA2-SAA4A0A096LPE2 208 aa10.62□□□□□ -0.71
SHC1-210ENST00000448116 SAA2P0DJI9 122 aaPredicted RBP10.62□□□□□ -0.71
SHC1-210ENST00000448116 TIMP3P35625 211 aa10.62□□□□□ -0.71
SHC1-210ENST00000448116 PLA2G2CQ5R387 149 aa10.62□□□□□ -0.71
SHC1-210ENST00000448116 MBNL2Q5VZF2 373 aaKnown RBP10.62□□□□□ -0.71
SHC1-210ENST00000448116 TEX38Q6PEX7 206 aa10.62□□□□□ -0.71
SHC1-210ENST00000448116 FAM90A1Q86YD7 464 aa10.62□□□□□ -0.71
SHC1-210ENST00000448116 C1orf162Q8NEQ5 155 aaPredicted RBP10.62□□□□□ -0.71
SHC1-210ENST00000448116 NOL4LQ96MY1 436 aaPredicted RBP10.62□□□□□ -0.71
SHC1-210ENST00000448116 PF4V1P10720 104 aa10.62□□□□□ -0.71
SHC1-210ENST00000448116 CD99P14209 185 aa10.62□□□□□ -0.71
SHC1-210ENST00000448116 HSPE1P61604 102 aaKnown RBP10.62□□□□□ -0.71
SHC1-210ENST00000448116 FOXL1Q12952 345 aa10.62□□□□□ -0.71
SHC1-210ENST00000448116 PSG5Q15238 335 aa10.62□□□□□ -0.71
SHC1-210ENST00000448116 MIR17HGQ75NE6 70 aa10.62□□□□□ -0.71
SHC1-210ENST00000448116 PLSCR4Q9NRQ2 329 aa10.62□□□□□ -0.71
SHC1-210ENST00000448116 TET2Q6N021 2002 aaPredicted RBP10.62□□□□□ -0.71
SHC1-210ENST00000448116 SPAARA0A1B0GVQ0 90 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 MKRN2OSH3BPM6 223 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 IER3P46695 156 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 ERVFC1-1P60608 527 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 SLC35B1P78383 322 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 GUSBP1Q15486 140 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 SMIM15Q7Z3B0 74 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 TMEM144Q7Z5S9 345 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 UHRF2Q96PU4 802 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 NDUFAF3Q9BU61 184 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 CBLN4Q9NTU7 201 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 C15orf61A6NNL5 157 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 IGLV1-44P01699 117 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 FRMD6-AS1P0C7T7 363 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 KLF3P57682 345 aaPredicted RBP10.61□□□□□ -0.71
SHC1-210ENST00000448116 OR52E5Q8NH55 327 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 C1orf159Q96HA4 380 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 CCL13Q99616 98 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 GAL3ST2Q9H3Q3 398 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 OR7C2O60412 319 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 TNFSF13O75888 250 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 MT-CO2P00403 227 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 MLANAQ16655 118 aa10.61□□□□□ -0.71
SHC1-210ENST00000448116 CMTM2Q8TAZ6 248 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms