RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 ACBD7Q8N6N7 88 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 ZNF645Q8N7E2 425 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 OR8J1Q8NGP2 316 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 OR5B3Q8NH48 314 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 GPR148Q8TDV2 347 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 TRUB1Q8WWH5 349 aaKnown RBP4.22□□□□□ -1.73
USP49-205ENST00000448078 ACOT12Q8WYK0 555 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 CXorf58Q96LI9 332 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 SELENOIQ9C0D9 397 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 RNF167Q9H6Y7 350 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 SLC35D1Q9NTN3 355 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 THYN1Q9P016 225 aa4.22□□□□□ -1.73
USP49-205ENST00000448078 DMBT1Q9UGM3 2413 aaPredicted RBP4.21□□□□□ -1.74
USP49-205ENST00000448078 ABCA13Q86UQ4 5058 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 TRBV7-1A0A0A6YYK4 115 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 OR4C45A6NMZ5 311 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 PPP5D1E7EU14 171 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 CRTAPO75718 401 aaPredicted RBP4.21□□□□□ -1.74
USP49-205ENST00000448078 CD5P06127 495 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 INAFM2P0DMQ5 153 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 GNB3P16520 340 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 HLA-DMBP28068 263 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 PSMB6P28072 239 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 RPL39P5Q59GN2 51 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 IGSF11Q5DX21 431 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 PLET1Q6UQ28 207 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 BTNL8Q6UX41 500 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 CLEC19AQ6UXS0 136 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 GAPTQ8N292 157 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 TTC9CQ8N5M4 171 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.21□□□□□ -1.74
USP49-205ENST00000448078 OR51A4Q8NGJ6 313 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 SETD6Q8TBK2 473 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 CD300LFQ8TDQ1 290 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 ABHD14BQ96IU4 210 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 DCUN1D5Q9BTE7 237 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 CENPOQ9BU64 300 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 ARGLU1Q9NWB6 273 aaPredicted RBP4.21□□□□□ -1.74
USP49-205ENST00000448078 IMPAD1Q9NX62 359 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 MLXQ9UH92 298 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 UBQLN2Q9UHD9 624 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 ZNF230Q9UIE0 474 aaPredicted RBP4.21□□□□□ -1.74
USP49-205ENST00000448078 ZNF257Q9Y2Q1 563 aa4.21□□□□□ -1.74
USP49-205ENST00000448078 RBM7Q9Y580 266 aaKnown RBP4.21□□□□□ -1.74
USP49-205ENST00000448078 DEFB131BA0A096LNP1 70 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 TRBV9A0A0B4J1U6 114 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 A8MWP6 167 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 G3V2T6 193 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 M0R1X1 148 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 PDCD6O75340 191 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 SC5DO75845 299 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 OR2J3O76001 311 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 BAG2O95816 211 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 HLA-AP01891 365 aaKnown RBP4.2□□□□□ -1.74
USP49-205ENST00000448078 C8orf88P0DMB2 117 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 APELAP0DMC3 54 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 MIFP14174 115 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 RANBP1P43487 201 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 MRPS15P82914 257 aaKnown RBP4.2□□□□□ -1.74
USP49-205ENST00000448078 PJVKQ0ZLH3 352 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 GNMTQ14749 295 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 SSX1Q16384 188 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 RNF212Q495C1 297 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 HSP90B2PQ58FF3 399 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 MEDAGQ5VYS4 303 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 GLIPR1L1Q6UWM5 242 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 MOB1BQ7L9L4 216 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 AQP12AQ8IXF9 295 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 CDH26Q8IXH8 852 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 MMD2Q8IY49 270 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 SYS1Q8N2H4 156 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 JAGN1Q8N5M9 183 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 DRAXINQ8NBI3 349 aaPredicted RBP4.2□□□□□ -1.74
USP49-205ENST00000448078 KCNG3Q8TAE7 436 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 SRSF12Q8WXF0 261 aaKnown RBP4.2□□□□□ -1.74
USP49-205ENST00000448078 ADTRPQ96IZ2 230 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 FAM210BQ96KR6 192 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 C4orf36Q96KX1 117 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 NICN1Q9BSH3 213 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 IFI27L2Q9H2X8 130 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 TMED3Q9Y3Q3 217 aa4.2□□□□□ -1.74
USP49-205ENST00000448078 TMEM213A2RRL7 107 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 DEFB4AO15263 64 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 CA1P00915 261 aaPredicted RBP4.19□□□□□ -1.74
USP49-205ENST00000448078 IGKV1-16P04430 117 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 MGMTP16455 207 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 FCGR2BP31994 310 aaPredicted RBP4.19□□□□□ -1.74
USP49-205ENST00000448078 SERPINB10P48595 397 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 UBE2KP61086 200 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 ZNF85Q03923 595 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 ATP6AP1Q15904 470 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 PRSS8Q16651 343 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 TTC23Q5W5X9 447 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 C12orf73Q69YU5 71 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 SPATA24Q86W54 205 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 VSTM2AQ8TAG5 236 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 MRPL30Q8TCC3 161 aaKnown RBP4.19□□□□□ -1.74
USP49-205ENST00000448078 CACNG8Q8WXS5 425 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 PTX4Q96A99 478 aa4.19□□□□□ -1.74
USP49-205ENST00000448078 Q96MT0 163 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms