RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 FBXL17Q9UF56 701 aa5.37□□□□□ -1.55
HDAC9-216ENST00000446646 RSL24D1Q9UHA3 163 aaKnown RBP5.37□□□□□ -1.55
HDAC9-216ENST00000446646 ANXA10Q9UJ72 324 aa5.37□□□□□ -1.55
HDAC9-216ENST00000446646 SAA2-SAA4A0A096LPE2 208 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 TRBV6-7A0A0A0MS04 114 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 A0A1W2PPI3 338 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 CXorf65A6NEN9 183 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 CBY3A6NI87 242 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 PCP4L1A6NKN8 68 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 I3L521 148 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 FGF16O43320 207 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 PFDN1O60925 122 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 DHFRP00374 187 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 IGHG2P01859 326 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 SCTP09683 121 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 SAA2P0DJI9 122 aaPredicted RBP5.36□□□□□ -1.55
HDAC9-216ENST00000446646 RRASP10301 218 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 RCVRNP35243 200 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 REG1BP48304 166 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 CDC34P49427 236 aaPredicted RBP5.36□□□□□ -1.55
HDAC9-216ENST00000446646 SPCS3P61009 180 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 HERV-K104P61576 105 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 CFHR3Q02985 330 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 PLGLAQ15195 96 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 RTL8BQ17RB0 113 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 CT45A1Q5HYN5 189 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 TEX38Q6PEX7 206 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 SLC35E3Q7Z769 313 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 ZNF575Q86XF7 245 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 OR52B4Q8NGK2 314 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 OR5H2Q8NGV7 314 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 CT45A3Q8NHU0 189 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 MAFIPQ8WZ33 124 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 MRGPRFQ96AM1 343 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 ADTRPQ96IZ2 230 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 TSC22D3Q99576 134 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 ZNF251Q9BRH9 671 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 IFI27L2Q9H2X8 130 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 OR1A1Q9P1Q5 309 aa5.36□□□□□ -1.55
HDAC9-216ENST00000446646 ZNF230Q9UIE0 474 aaPredicted RBP5.36□□□□□ -1.55
HDAC9-216ENST00000446646 TRAV25A0A0B4J276 109 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 FAM90A9PA6NNJ1 464 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 NCBP2LA6PVI3 153 aaKnown RBP5.35□□□□□ -1.55
HDAC9-216ENST00000446646 H3BMQ9 156 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 H7C2Y5 167 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 AP4M1O00189 453 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 OVOL1O14753 267 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 SLC31A2O15432 143 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 CREBL2O60519 120 aaPredicted RBP5.35□□□□□ -1.55
HDAC9-216ENST00000446646 HPGDSO60760 199 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 EIF4EP06730 217 aaKnown RBP5.35□□□□□ -1.55
HDAC9-216ENST00000446646 OR4E1P0C645 316 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 OR8U9P0C7N5 309 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 GSTT2P0CG29 244 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 GSTT2BP0CG30 244 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 NQO2P16083 231 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 TBPP20226 339 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 PSMB6P28072 239 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 FOXE3Q13461 319 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 DIAPH2-AS1Q14236 149 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 CDK10Q15131 360 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 MMDQ15546 238 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 CXorf66Q5JRM2 361 aaPredicted RBP5.35□□□□□ -1.55
HDAC9-216ENST00000446646 DGAT2L7PQ6IED9 249 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 ZNF833PQ6ZTB9 187 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 TMEM17Q86X19 198 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 HOGA1Q86XE5 327 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 PDPNQ86YL7 162 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 CCDC28AQ8IWP9 274 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 H1FOOQ8IZA3 346 aaPredicted RBP5.35□□□□□ -1.55
HDAC9-216ENST00000446646 ZNF645Q8N7E2 425 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 OR5AP2Q8NGF4 316 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 MCFD2Q8NI22 146 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 MYOZ3Q8TDC0 251 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 GPX8Q8TED1 209 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 DIRAS2Q96HU8 199 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 RASL11BQ9BPW5 248 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 TOLLIPQ9H0E2 274 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 C11orf54Q9H0W9 315 aaPredicted RBP5.35□□□□□ -1.55
HDAC9-216ENST00000446646 LIN7CQ9NUP9 197 aaKnown RBP5.35□□□□□ -1.55
HDAC9-216ENST00000446646 EHFQ9NZC4 300 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 UBQLN2Q9UHD9 624 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 NAGKQ9UJ70 344 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 PRELID3BQ9Y3B1 194 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 WASHC3Q9Y3C0 194 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 OR2W1Q9Y3N9 320 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 DSCAML1Q8TD84 2053 aa5.35□□□□□ -1.55
HDAC9-216ENST00000446646 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
HDAC9-216ENST00000446646 FLG2Q5D862 2391 aaPredicted RBP5.34□□□□□ -1.55
HDAC9-216ENST00000446646 IGHV3-72A0A0B4J1Y9 119 aa5.34□□□□□ -1.55
HDAC9-216ENST00000446646 M0R1X1 148 aa5.34□□□□□ -1.55
HDAC9-216ENST00000446646 OR5H8P0DN80 308 aa5.34□□□□□ -1.55
HDAC9-216ENST00000446646 ELK1P19419 428 aa5.34□□□□□ -1.55
HDAC9-216ENST00000446646 KIR2DS2P43631 304 aa5.34□□□□□ -1.55
HDAC9-216ENST00000446646 ZNF134P52741 427 aa5.34□□□□□ -1.55
HDAC9-216ENST00000446646 SLC35B1P78383 322 aa5.34□□□□□ -1.55
HDAC9-216ENST00000446646 SSBP1Q04837 148 aaKnown RBP5.34□□□□□ -1.55
HDAC9-216ENST00000446646 CATR1Q13166 79 aa5.34□□□□□ -1.55
HDAC9-216ENST00000446646 EBI3Q14213 229 aa5.34□□□□□ -1.55
HDAC9-216ENST00000446646 MSMO1Q15800 293 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms