RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 HIST1H1AQ02539 215 aaPredicted RBP7.21□□□□□ -1.26
PTPN3-204ENST00000446349 ZNF600Q6ZNG1 722 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 Q6ZS92 163 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 ZNRF1Q8ND25 227 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 TSC2P49815 1807 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 C4orf51C9J302 202 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 VENTXO95231 258 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 CSN3P07498 182 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 AWAT1Q58HT5 328 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 SPSB3Q6PJ21 355 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 SGMS2Q8NHU3 365 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 RAB37Q96AX2 223 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 NPIPB7O75200 414 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 FAM24BQ8N5W8 94 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 FAM131CQ96AQ9 280 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 C1QTNF4Q9BXJ3 329 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 TRAV9-1A0A075B6T8 112 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 IGHV3-21A0A0B4J1V1 117 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 NTN1O95631 604 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 VSIG10L2P0DP72 767 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 CEBPDP49716 269 aaPredicted RBP7.21□□□□□ -1.26
PTPN3-204ENST00000446349 C10orf111Q8N326 155 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 LINC01356Q8N9X3 169 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 NUDT10Q8NFP7 164 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 DUX3Q96PT4 197 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 SRSF8Q9BRL6 282 aaKnown RBP7.21□□□□□ -1.26
PTPN3-204ENST00000446349 MBD3L4A6NDZ8 208 aaPredicted RBP7.21□□□□□ -1.26
PTPN3-204ENST00000446349 MBD3L3A6NE82 208 aaPredicted RBP7.21□□□□□ -1.26
PTPN3-204ENST00000446349 MBD3L5A6NJ08 208 aaPredicted RBP7.21□□□□□ -1.26
PTPN3-204ENST00000446349 KLF4O43474 513 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 LDLRAD2Q5SZI1 272 aa7.21□□□□□ -1.26
PTPN3-204ENST00000446349 MBD3L2Q8NHZ7 208 aaPredicted RBP7.21□□□□□ -1.26
PTPN3-204ENST00000446349 K7ENP7 123 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 CDX1P47902 265 aaPredicted RBP7.2□□□□□ -1.26
PTPN3-204ENST00000446349 NMUP48645 174 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 FAM71F2Q6NXP2 309 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 SIGLEC5O15389 551 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 CCL1P22362 96 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 CIARTQ8N365 385 aaPredicted RBP7.2□□□□□ -1.26
PTPN3-204ENST00000446349 IFT22Q9H7X7 185 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 LGALS3P17931 250 aaKnown RBP7.2□□□□□ -1.26
PTPN3-204ENST00000446349 SSTR5P35346 364 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 IER3P46695 156 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 P2RY4P51582 365 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 MRPL54Q6P161 138 aaKnown RBP7.2□□□□□ -1.26
PTPN3-204ENST00000446349 USMG5Q96IX5 58 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 FOXA2Q9Y261 457 aaPredicted RBP7.2□□□□□ -1.26
PTPN3-204ENST00000446349 UCP1P25874 307 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 TMEM187Q14656 261 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 C11orf91Q3C1V1 193 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 LINC00305Q7Z4B0 112 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 NPBWR2P48146 333 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 OR8A1Q8NGG7 326 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 NPIPB3Q92617 1050 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 TCL1AP56279 114 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 ZP1P60852 638 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 FOXB2Q5VYV0 432 aa7.2□□□□□ -1.26
PTPN3-204ENST00000446349 TRGV11A0A075B6L2 103 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 CYB561D1Q8N8Q1 229 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 ITLN2Q8WWU7 325 aaPredicted RBP7.19□□□□□ -1.26
PTPN3-204ENST00000446349 RIF1Q5UIP0 2472 aaKnown RBP7.19□□□□□ -1.26
PTPN3-204ENST00000446349 SPTBN2O15020 2390 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 C12orf77C9JDV5 145 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 ARL14EPLP0DKL9 152 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 CACNG7P62955 275 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 ZNF841Q6ZN19 808 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 MRPL13Q9BYD1 178 aaKnown RBP7.19□□□□□ -1.26
PTPN3-204ENST00000446349 ATP5LO75964 103 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 CELA3AP09093 270 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 ERVK11-1P61568 191 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 TMEM155Q4W5P6 130 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 RNF166Q96A37 237 aaPredicted RBP7.19□□□□□ -1.26
PTPN3-204ENST00000446349 F12P00748 615 aaPredicted RBP7.19□□□□□ -1.26
PTPN3-204ENST00000446349 NBEAP1P0C6P0 100 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 OR10D4PQ8NGN7 298 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 SPRR3Q9UBC9 169 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 ZGRF1Q86YA3 2104 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 PKIAP61925 76 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 CLEC9AQ6UXN8 241 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 AMELYQ99218 206 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 SOSTQ9BQB4 213 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 RSG1Q9BU20 258 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 COL6A6A6NMZ7 2263 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 FBXL15Q9H469 300 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 J3QLI3 93 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 C2orf83Q53S99 150 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 MIC13Q5XKP0 118 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 ZNF497Q6ZNH5 498 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 FUT9Q9Y231 359 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 MPDZO75970 2070 aa7.19□□□□□ -1.26
PTPN3-204ENST00000446349 TMSB15BA0A087X1C1 80 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 A0A0G2JK05 382 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 PSMB11A5LHX3 300 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 TMEM262E9PQX1 116 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 OVOL1O14753 267 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 LY6DQ14210 128 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 ZNF256Q9Y2P7 627 aaPredicted RBP7.18□□□□□ -1.26
PTPN3-204ENST00000446349 PLXND1Q9Y4D7 1925 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 LINC00862A6NCI5 91 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 NDUFB4O95168 129 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms