RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-238ENST00000446312 MSMO1Q15800 293 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 DUX4L9Q6RFH8 374 aaPredicted RBP10.43□□□□□ -0.74
DDR1-238ENST00000446312 ZNF497Q6ZNH5 498 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 OR4P4Q8NGL7 312 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 STARD4Q96DR4 205 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 MS4A5Q9H3V2 200 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 UQCR10Q9UDW1 63 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 ZNF391Q9UJN7 358 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 WIPI2Q9Y4P8 454 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 TOX4O94842 621 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 NIT1Q86X76 327 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 OR2Z1Q8NG97 314 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 WNT10AQ9GZT5 417 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 RNASE7Q9H1E1 156 aaKnown RBP10.43□□□□□ -0.74
DDR1-238ENST00000446312 ARRDC1-AS1Q9H2J1 176 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 RYDENQ9NUL5 291 aaKnown RBP10.43□□□□□ -0.74
DDR1-238ENST00000446312 TRAV30A0A087WSZ9 112 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 A0A1B0GV72 72 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 FCN1O00602 326 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 SAP30O75446 220 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 SERF1AO75920 110 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 CD1BP29016 333 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 TBC1D28Q2M2D7 210 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 KCNIP4Q6PIL6 250 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 OR8I2Q8N0Y5 310 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 OR4A16Q8NH70 328 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 TMEM170AQ8WVE7 144 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 RND1Q92730 232 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 COQ2Q96H96 371 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 FAM173AQ9BQD7 235 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 RNF114Q9Y508 228 aa10.43□□□□□ -0.74
DDR1-238ENST00000446312 COL6A6A6NMZ7 2263 aa10.42□□□□□ -0.74
DDR1-238ENST00000446312 H3BTX0 84 aa10.42□□□□□ -0.74
DDR1-238ENST00000446312 LAMTOR5O43504 91 aa10.42□□□□□ -0.74
DDR1-238ENST00000446312 OR7C2O60412 319 aa10.42□□□□□ -0.74
DDR1-238ENST00000446312 GPR12P47775 334 aa10.42□□□□□ -0.74
DDR1-238ENST00000446312 TMEM14EPQ6UXP3 125 aa10.42□□□□□ -0.74
DDR1-238ENST00000446312 SNRNP40Q96DI7 357 aaKnown RBP10.42□□□□□ -0.74
DDR1-238ENST00000446312 LRFN3Q9BTN0 628 aa10.42□□□□□ -0.74
DDR1-238ENST00000446312 CGAP01215 116 aa10.42□□□□□ -0.74
DDR1-238ENST00000446312 TIMP3P35625 211 aa10.42□□□□□ -0.74
DDR1-238ENST00000446312 ARR3P36575 388 aa10.42□□□□□ -0.74
DDR1-238ENST00000446312 YTHDF2Q9Y5A9 579 aaKnown RBP10.42□□□□□ -0.74
DDR1-238ENST00000446312 TRAV1-1A0A0B4J248 108 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 C9orf172C9J069 976 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 H0Y8G0 127 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 CD24P25063 80 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 CCL11P51671 97 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 TPPP2P59282 170 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 COA6Q5JTJ3 125 aaKnown RBP10.41□□□□□ -0.74
DDR1-238ENST00000446312 SP5Q6BEB4 398 aaPredicted RBP10.41□□□□□ -0.74
DDR1-238ENST00000446312 STXBP6Q8NFX7 210 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 KLF14Q8TD94 323 aaPredicted RBP10.41□□□□□ -0.74
DDR1-238ENST00000446312 LINC00479Q96M42 142 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 TECTAO75443 2155 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 LRBAP50851 2863 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 ANKRD11Q6UB99 2663 aaPredicted RBP10.41□□□□□ -0.74
DDR1-238ENST00000446312 IGHV3-21A0A0B4J1V1 117 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 DUXBA0A1W2PPF3 345 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 TMEM30CPA0ZSE6 113 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 SNURFLB1AK76 121 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 MLNRO43193 412 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 TCTAP57738 103 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 CATR1Q13166 79 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 KRTAP27-1Q3LI81 207 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 OR8G5Q8NG78 346 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 LRRC29Q8WV35 223 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 TMEM186Q96B77 213 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 HSD17B10Q99714 261 aaKnown RBP10.41□□□□□ -0.74
DDR1-238ENST00000446312 PSMG3Q9BT73 122 aaPredicted RBP10.41□□□□□ -0.74
DDR1-238ENST00000446312 PXMP4Q9Y6I8 212 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 ZGRF1Q86YA3 2104 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 A0A1W2PNU3 283 aaPredicted RBP10.41□□□□□ -0.74
DDR1-238ENST00000446312 OR5B21A6NL26 309 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 C15orf62A8K5M9 175 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 SPRY3O43610 288 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 CER1O95813 267 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 REG1BP48304 166 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 RPL31P62899 125 aaKnown RBP10.41□□□□□ -0.74
DDR1-238ENST00000446312 FOXF2Q12947 444 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 KRTCAP3Q53RY4 240 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 LSM10Q969L4 123 aaKnown RBP10.41□□□□□ -0.74
DDR1-238ENST00000446312 UHRF2Q96PU4 802 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 CTDSP1Q9GZU7 261 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 SLC35D1Q9NTN3 355 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 SPRR3Q9UBC9 169 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 MPC1Q9Y5U8 109 aa10.41□□□□□ -0.74
DDR1-238ENST00000446312 ZCCHC24Q8N2G6 241 aaKnown RBP10.4□□□□□ -0.74
DDR1-238ENST00000446312 GAGE12BA1L429 117 aa10.4□□□□□ -0.74
DDR1-238ENST00000446312 TOMM40O96008 361 aa10.4□□□□□ -0.74
DDR1-238ENST00000446312 CRYBB3P26998 211 aa10.4□□□□□ -0.74
DDR1-238ENST00000446312 MC5RP33032 325 aa10.4□□□□□ -0.74
DDR1-238ENST00000446312 ZNF645Q8N7E2 425 aa10.4□□□□□ -0.74
DDR1-238ENST00000446312 OR10W1Q8NGF6 305 aa10.4□□□□□ -0.74
DDR1-238ENST00000446312 SFRP2Q96HF1 295 aa10.4□□□□□ -0.74
DDR1-238ENST00000446312 ATRXP46100 2492 aa10.4□□□□□ -0.75
DDR1-238ENST00000446312 TET2Q6N021 2002 aaPredicted RBP10.4□□□□□ -0.75
DDR1-238ENST00000446312 DIRC3C9JPN6 131 aa10.39□□□□□ -0.75
DDR1-238ENST00000446312 MT-CO2P00403 227 aa10.39□□□□□ -0.75
DDR1-238ENST00000446312 CRISP2P16562 243 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms