RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 RABL2AQ9UBK7 228 aaPredicted RBP14.35□□□□□ -0.11
HDAC4-203ENST00000445704 RABL2BQ9UNT1 228 aa14.35□□□□□ -0.11
HDAC4-203ENST00000445704 LSM4Q9Y4Z0 139 aaKnown RBP14.35□□□□□ -0.11
HDAC4-203ENST00000445704 PPP5D1E7EU14 171 aa14.34□□□□□ -0.11
HDAC4-203ENST00000445704 GSTZ1O43708 216 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-203ENST00000445704 LY86O95711 162 aa14.34□□□□□ -0.11
HDAC4-203ENST00000445704 TRAPPC2P0DI81 140 aa14.34□□□□□ -0.11
HDAC4-203ENST00000445704 TRAPPC2BP0DI82 140 aa14.34□□□□□ -0.11
HDAC4-203ENST00000445704 SPNP16150 400 aa14.34□□□□□ -0.11
HDAC4-203ENST00000445704 WT1-ASQ06250 92 aa14.34□□□□□ -0.11
HDAC4-203ENST00000445704 OR4C16Q8NGL9 310 aa14.34□□□□□ -0.11
HDAC4-203ENST00000445704 OR9G4Q8NGQ1 327 aa14.34□□□□□ -0.11
HDAC4-203ENST00000445704 MARCH1Q8TCQ1 289 aa14.34□□□□□ -0.11
HDAC4-203ENST00000445704 SRSF8Q9BRL6 282 aaKnown RBP14.34□□□□□ -0.11
HDAC4-203ENST00000445704 NDUFA4L2Q9NRX3 87 aa14.34□□□□□ -0.11
HDAC4-203ENST00000445704 OR51B2Q9Y5P1 312 aa14.34□□□□□ -0.11
HDAC4-203ENST00000445704 MFSD2BA6NFX1 497 aa14.33□□□□□ -0.12
HDAC4-203ENST00000445704 C15orf61A6NNL5 157 aa14.33□□□□□ -0.12
HDAC4-203ENST00000445704 H0Y980 276 aa14.33□□□□□ -0.12
HDAC4-203ENST00000445704 SNAPC5O75971 98 aa14.33□□□□□ -0.12
HDAC4-203ENST00000445704 DHFRP00374 187 aa14.33□□□□□ -0.12
HDAC4-203ENST00000445704 DEFA4P12838 97 aa14.33□□□□□ -0.12
HDAC4-203ENST00000445704 MEF2DQ14814 521 aa14.33□□□□□ -0.12
HDAC4-203ENST00000445704 THOC7Q6I9Y2 204 aaKnown RBP14.33□□□□□ -0.12
HDAC4-203ENST00000445704 OR6Q1Q8NGQ2 317 aa14.33□□□□□ -0.12
HDAC4-203ENST00000445704 OR1L8Q8NGR8 309 aa14.33□□□□□ -0.12
HDAC4-203ENST00000445704 ELOVL1Q9BW60 279 aa14.33□□□□□ -0.12
HDAC4-203ENST00000445704 HINT2Q9BX68 163 aa14.33□□□□□ -0.12
HDAC4-203ENST00000445704 ANKRD20A5PA0PJZ0 165 aa14.32□□□□□ -0.12
HDAC4-203ENST00000445704 FABP12A6NFH5 140 aa14.32□□□□□ -0.12
HDAC4-203ENST00000445704 IGLV1-51P01701 117 aa14.32□□□□□ -0.12
HDAC4-203ENST00000445704 HLA-AP01891 365 aaKnown RBP14.32□□□□□ -0.12
HDAC4-203ENST00000445704 SERPINE2P07093 398 aa14.32□□□□□ -0.12
HDAC4-203ENST00000445704 AKAIN1P0CW23 69 aa14.32□□□□□ -0.12
HDAC4-203ENST00000445704 OR13C7P0DN81 318 aa14.32□□□□□ -0.12
HDAC4-203ENST00000445704 HIST1H1BP16401 226 aaKnown RBP14.32□□□□□ -0.12
HDAC4-203ENST00000445704 ZFAND1Q8TCF1 268 aa14.32□□□□□ -0.12
HDAC4-203ENST00000445704 TMEM14BQ9NUH8 114 aa14.32□□□□□ -0.12
HDAC4-203ENST00000445704 RSL24D1Q9UHA3 163 aaKnown RBP14.32□□□□□ -0.12
HDAC4-203ENST00000445704 PRNDQ9UKY0 176 aa14.32□□□□□ -0.12
HDAC4-203ENST00000445704 DNAH9Q9NYC9 4486 aa14.32□□□□□ -0.12
HDAC4-203ENST00000445704 C3orf85A0A1B0GTC6 90 aa14.31□□□□□ -0.12
HDAC4-203ENST00000445704 IGKV1-5P01602 117 aa14.31□□□□□ -0.12
HDAC4-203ENST00000445704 CTSDP07339 412 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-203ENST00000445704 CSN3P07498 182 aa14.31□□□□□ -0.12
HDAC4-203ENST00000445704 IZUMO4Q1ZYL8 232 aa14.31□□□□□ -0.12
HDAC4-203ENST00000445704 CLEC19AQ6UXS0 136 aa14.31□□□□□ -0.12
HDAC4-203ENST00000445704 H2BFWTQ7Z2G1 175 aa14.31□□□□□ -0.12
HDAC4-203ENST00000445704 GDPD1Q8N9F7 314 aa14.31□□□□□ -0.12
HDAC4-203ENST00000445704 LSM10Q969L4 123 aaKnown RBP14.31□□□□□ -0.12
HDAC4-203ENST00000445704 EEF1AKMT3Q96AZ1 226 aa14.31□□□□□ -0.12
HDAC4-203ENST00000445704 TSC22D3Q99576 134 aa14.31□□□□□ -0.12
HDAC4-203ENST00000445704 B9D2Q9BPU9 175 aa14.31□□□□□ -0.12
HDAC4-203ENST00000445704 COPZ2Q9P299 210 aa14.31□□□□□ -0.12
HDAC4-203ENST00000445704 DISC1C4P0D8 188 aa14.3□□□□□ -0.12
HDAC4-203ENST00000445704 GP9P14770 177 aa14.3□□□□□ -0.12
HDAC4-203ENST00000445704 MFAP2P55001 183 aa14.3□□□□□ -0.12
HDAC4-203ENST00000445704 SP6Q3SY56 376 aa14.3□□□□□ -0.12
HDAC4-203ENST00000445704 CCDC71LQ8N9Z2 235 aa14.3□□□□□ -0.12
HDAC4-203ENST00000445704 OR51S1Q8NGJ8 323 aa14.3□□□□□ -0.12
HDAC4-203ENST00000445704 OR5B3Q8NH48 314 aa14.3□□□□□ -0.12
HDAC4-203ENST00000445704 RTBDNQ9BSG5 229 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-203ENST00000445704 V9GYH0 126 aa14.3□□□□□ -0.12
HDAC4-203ENST00000445704 GGCTO75223 188 aaKnown RBP14.29□□□□□ -0.12
HDAC4-203ENST00000445704 OR2C1O95371 312 aa14.29□□□□□ -0.12
HDAC4-203ENST00000445704 P0C879 139 aa14.29□□□□□ -0.12
HDAC4-203ENST00000445704 ARL3P36405 182 aa14.29□□□□□ -0.12
HDAC4-203ENST00000445704 DCTN2Q13561 401 aaKnown RBP14.29□□□□□ -0.12
HDAC4-203ENST00000445704 TATDN3Q17R31 274 aa14.29□□□□□ -0.12
HDAC4-203ENST00000445704 FAM209BQ5JX69 171 aa14.29□□□□□ -0.12
HDAC4-203ENST00000445704 HSD17B13Q7Z5P4 300 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-203ENST00000445704 C5orf66Q9H5L9 145 aa14.29□□□□□ -0.12
HDAC4-203ENST00000445704 FKBP11Q9NYL4 201 aa14.29□□□□□ -0.12
HDAC4-203ENST00000445704 F11RQ9Y624 299 aaKnown RBP14.29□□□□□ -0.12
HDAC4-203ENST00000445704 ZNF701M0R085 212 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-203ENST00000445704 EDN2P20800 178 aa14.28□□□□□ -0.12
HDAC4-203ENST00000445704 UCP1P25874 307 aa14.28□□□□□ -0.12
HDAC4-203ENST00000445704 CD69Q07108 199 aa14.28□□□□□ -0.12
HDAC4-203ENST00000445704 C11orf87Q6NUJ2 197 aa14.28□□□□□ -0.12
HDAC4-203ENST00000445704 ADAMTSL5Q6ZMM2 481 aa14.28□□□□□ -0.12
HDAC4-203ENST00000445704 OR4A16Q8NH70 328 aa14.28□□□□□ -0.12
HDAC4-203ENST00000445704 ZNF502Q8TBZ5 544 aa14.28□□□□□ -0.12
HDAC4-203ENST00000445704 CXorf58Q96LI9 332 aa14.28□□□□□ -0.12
HDAC4-203ENST00000445704 SLC2A8Q9NY64 477 aa14.28□□□□□ -0.12
HDAC4-203ENST00000445704 GPR132Q9UNW8 380 aa14.28□□□□□ -0.12
HDAC4-203ENST00000445704 TRBV7-1A0A0A6YYK4 115 aa14.27□□□□□ -0.13
HDAC4-203ENST00000445704 MECP2P51608 486 aaKnown RBP14.27□□□□□ -0.13
HDAC4-203ENST00000445704 SURF2Q15527 256 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-203ENST00000445704 ZNF79Q15937 498 aa14.27□□□□□ -0.13
HDAC4-203ENST00000445704 TRIM16LQ309B1 348 aa14.27□□□□□ -0.13
HDAC4-203ENST00000445704 SLC25A24Q6NUK1 477 aa14.27□□□□□ -0.13
HDAC4-203ENST00000445704 TRIM63Q969Q1 353 aa14.27□□□□□ -0.13
HDAC4-203ENST00000445704 TMEM56Q96MV1 263 aa14.27□□□□□ -0.13
HDAC4-203ENST00000445704 PRRT1Q99946 306 aa14.27□□□□□ -0.13
HDAC4-203ENST00000445704 THAP7Q9BT49 309 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-203ENST00000445704 ZC4H2Q9NQZ6 224 aa14.27□□□□□ -0.13
HDAC4-203ENST00000445704 SIGLEC8Q9NYZ4 499 aa14.27□□□□□ -0.13
HDAC4-203ENST00000445704 PEMTQ9UBM1 199 aa14.27□□□□□ -0.13
HDAC4-203ENST00000445704 C14orf166Q9Y224 244 aaKnown RBP14.27□□□□□ -0.13
HDAC4-203ENST00000445704 SORL1Q92673 2214 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms