RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 HSPE1P61604 102 aaKnown RBP9.86□□□□□ -0.83
MSH6-204ENST00000445503 MORN2Q502X0 79 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 ACTL10Q5JWF8 245 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 Q6ZR03 302 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 TCTEX1D1Q8N7M0 179 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 GGTLC1Q9BX51 225 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 RNASE7Q9H1E1 156 aaKnown RBP9.86□□□□□ -0.83
MSH6-204ENST00000445503 SSUH2Q9Y2M2 353 aa9.86□□□□□ -0.83
MSH6-204ENST00000445503 SPAARA0A1B0GVQ0 90 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 TIMP3P35625 211 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 GBGT1Q8N5D6 347 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 DEFB124Q8NES8 71 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 MGST2Q99735 147 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 EXPH5Q8NEV8 1989 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 A8MWP6 167 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 RBFOX2O43251 390 aaKnown RBP eCLIP9.85□□□□□ -0.831e-6■□□□□ 8.9
MSH6-204ENST00000445503 GGCTO75223 188 aaKnown RBP9.85□□□□□ -0.83
MSH6-204ENST00000445503 ORM2P19652 201 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 UBE2G1P62253 170 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 NABP2Q9BQ15 211 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 INTS1Q8N201 2190 aaKnown RBP9.85□□□□□ -0.83
MSH6-204ENST00000445503 DIRC3C9JPN6 131 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 TRIP6Q15654 476 aaKnown RBP9.85□□□□□ -0.83
MSH6-204ENST00000445503 OR4A47Q6IF82 309 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 TEX38Q6PEX7 206 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 SMIM15Q7Z3B0 74 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 DMRTC2Q8IXT2 367 aaPredicted RBP9.85□□□□□ -0.83
MSH6-204ENST00000445503 OR5B3Q8NH48 314 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 IL19Q9UHD0 177 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 DAZAP1Q96EP5 407 aaKnown RBP9.85□□□□□ -0.83
MSH6-204ENST00000445503 TPPP3Q9BW30 176 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 JPT1Q9UK76 154 aa9.85□□□□□ -0.83
MSH6-204ENST00000445503 YTHDF2Q9Y5A9 579 aaKnown RBP9.85□□□□□ -0.83
MSH6-204ENST00000445503 IGHV2OR16-5A0A0B4J2B6 119 aa9.84□□□□□ -0.83
MSH6-204ENST00000445503 TNFSF10P50591 281 aa9.84□□□□□ -0.83
MSH6-204ENST00000445503 EFNB3Q15768 340 aa9.84□□□□□ -0.83
MSH6-204ENST00000445503 RNASEKQ6P5S7 137 aaKnown RBP9.84□□□□□ -0.83
MSH6-204ENST00000445503 MOB3BQ86TA1 216 aa9.84□□□□□ -0.83
MSH6-204ENST00000445503 ZADH2Q8N4Q0 377 aa9.84□□□□□ -0.83
MSH6-204ENST00000445503 C5orf30Q96GV9 206 aa9.84□□□□□ -0.83
MSH6-204ENST00000445503 TMEM167BQ9NRX6 74 aa9.84□□□□□ -0.83
MSH6-204ENST00000445503 APC2O95996 2303 aa9.84□□□□□ -0.83
MSH6-204ENST00000445503 USF1P22415 310 aaPredicted RBP9.84□□□□□ -0.83
MSH6-204ENST00000445503 PLGLAQ15195 96 aa9.84□□□□□ -0.83
MSH6-204ENST00000445503 HARBI1Q96MB7 349 aa9.84□□□□□ -0.83
MSH6-204ENST00000445503 SPTAN1Q13813 2472 aaKnown RBP9.84□□□□□ -0.83
MSH6-204ENST00000445503 ABCA4P78363 2273 aa9.84□□□□□ -0.83
MSH6-204ENST00000445503 CA1P00915 261 aaPredicted RBP9.84□□□□□ -0.83
MSH6-204ENST00000445503 MLANAQ16655 118 aa9.84□□□□□ -0.83
MSH6-204ENST00000445503 CCL17Q92583 94 aa9.84□□□□□ -0.83
MSH6-204ENST00000445503 STARD4Q96DR4 205 aa9.84□□□□□ -0.83
MSH6-204ENST00000445503 A6NNC1 897 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 SRIP30626 198 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 KIR2DS2P43631 304 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 MFAP2P55001 183 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 ASPHD1Q5U4P2 390 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 FAM19A2Q8N3H0 131 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 ZCCHC14Q8WYQ9 949 aaKnown RBP9.83□□□□□ -0.84
MSH6-204ENST00000445503 ELOVL5Q9NYP7 299 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 IL36BQ9NZH7 164 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 ZNF835Q9Y2P0 537 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 H3BTX0 84 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 WISP2O76076 250 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 Q6ZN92 141 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 FAM216BQ8N7L0 139 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 MDS2Q8NDY4 140 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 DYNLRB1Q9NP97 96 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 ZNRD1Q9P1U0 126 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 RNF7Q9UBF6 113 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 FRYLO94915 3013 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 NKX6-3A6NJ46 265 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 J3QW42 95 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 COL8A2P25067 703 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 CHRNB4P30926 498 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 HNRNPA3P51991 378 aaKnown RBP9.83□□□□□ -0.84
MSH6-204ENST00000445503 BPIFB3P59826 476 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 ACSF3Q4G176 576 aaPredicted RBP9.83□□□□□ -0.84
MSH6-204ENST00000445503 C22orf15Q8WYQ4 148 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 PRNDQ9UKY0 176 aa9.83□□□□□ -0.84
MSH6-204ENST00000445503 IGHV3-72A0A0B4J1Y9 119 aa9.82□□□□□ -0.84
MSH6-204ENST00000445503 NUPR1O60356 82 aa9.82□□□□□ -0.84
MSH6-204ENST00000445503 STAG3L2P0CL84 134 aa9.82□□□□□ -0.84
MSH6-204ENST00000445503 STAG3L3P0CL85 134 aa9.82□□□□□ -0.84
MSH6-204ENST00000445503 IBA57Q5T440 356 aaKnown RBP9.82□□□□□ -0.84
MSH6-204ENST00000445503 ZCCHC24Q8N2G6 241 aaKnown RBP9.82□□□□□ -0.84
MSH6-204ENST00000445503 SAA2-SAA4A0A096LPE2 208 aa9.82□□□□□ -0.84
MSH6-204ENST00000445503 GFRA3O60609 400 aa9.82□□□□□ -0.84
MSH6-204ENST00000445503 SAA2P0DJI9 122 aaPredicted RBP9.82□□□□□ -0.84
MSH6-204ENST00000445503 BRS3P32247 399 aa9.82□□□□□ -0.84
MSH6-204ENST00000445503 PAFAH1B2P68402 229 aa9.82□□□□□ -0.84
MSH6-204ENST00000445503 LHFPL4Q7Z7J7 247 aa9.82□□□□□ -0.84
MSH6-204ENST00000445503 MRPL37Q9BZE1 423 aaKnown RBP9.82□□□□□ -0.84
MSH6-204ENST00000445503 WNT10AQ9GZT5 417 aa9.82□□□□□ -0.84
MSH6-204ENST00000445503 PRR33A8MZF0 331 aa9.82□□□□□ -0.84
MSH6-204ENST00000445503 NDUFS8O00217 210 aa9.82□□□□□ -0.84
MSH6-204ENST00000445503 RPLP1P05386 114 aaKnown RBP9.82□□□□□ -0.84
MSH6-204ENST00000445503 REG1AP05451 166 aa9.82□□□□□ -0.84
MSH6-204ENST00000445503 KIR2DL2P43627 348 aaPredicted RBP9.82□□□□□ -0.84
MSH6-204ENST00000445503 TMEM106BQ9NUM4 274 aa9.82□□□□□ -0.84
MSH6-204ENST00000445503 SLC25A5P05141 298 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms