RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 LINC00312Q9Y6C7 94 aa2.19□□□□□ -2.06
UBBP3-201ENST00000445497 HLA-DRB4X5D2U9 266 aa2.19□□□□□ -2.06
UBBP3-201ENST00000445497 AKAP12Q02952 1782 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 EPRSP07814 1512 aaKnown RBP2.18□□□□□ -2.06
UBBP3-201ENST00000445497 CDK13Q14004 1512 aaKnown RBP2.18□□□□□ -2.06
UBBP3-201ENST00000445497 IGHV3OR16-12A0A075B7B8 117 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 IGKV1D-8A0A087WSZ0 117 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 IGHV6-1A0A0B4J1U7 121 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 IGKV1D-13A0A0B4J2D9 117 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 IGHV1-69DA0A0B4J2H0 117 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 IGHV4-61A0A0C4DH41 118 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 FAM236AA0A1B0GUQ0 79 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 FAM236BA0A1B0GV22 79 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 SMIM35A0A1B0GVV1 85 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 DPRXA6NFQ7 191 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 LINC00473A8K010 186 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 ZNF727A8MUV8 499 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 KLLNB2CW77 178 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 H3BRM9 83 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 K7N7A8 449 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 FFAR1O14842 300 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 TAX1BP3O14907 124 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 SOCS1O15524 211 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 COX7A2P2O60397 106 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 HIST1H2BKO60814 126 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 SFT2D2O95562 160 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 CGAP01215 116 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 TRBV12-3P01733 135 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 IGHV4-59P01825 116 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 RBP4P02753 201 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 HIST1H2BJP06899 126 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 ZNF705DP0CH99 300 aaPredicted RBP2.18□□□□□ -2.06
UBBP3-201ENST00000445497 IGKV1-13P0DP09 117 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 FABP2P12104 132 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 NFYAP23511 347 aaPredicted RBP2.18□□□□□ -2.06
UBBP3-201ENST00000445497 HIST1H2BOP23527 126 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 HIST1H2BBP33778 126 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 RPS10P46783 165 aaKnown RBP2.18□□□□□ -2.06
UBBP3-201ENST00000445497 KLK7P49862 253 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 ZNF83P51522 516 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 NDUFA8P51970 172 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 NCBP2P52298 156 aaKnown RBP eCLIP2.18□□□□□ -2.06
UBBP3-201ENST00000445497 SYNJ2BPP57105 145 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 HIST1H2BDP58876 126 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 GABARAPL2P60520 117 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 HIST1H2BCP62807 126 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 SRSF3P84103 164 aaKnown RBP2.18□□□□□ -2.06
UBBP3-201ENST00000445497 HIST2H2BEQ16778 126 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 LGALSLQ3ZCW2 172 aaPredicted RBP2.18□□□□□ -2.06
UBBP3-201ENST00000445497 CLLU1OSQ5K130 101 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.18□□□□□ -2.06
UBBP3-201ENST00000445497 ZNF678Q5SXM1 525 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 DNAJC24Q6P3W2 148 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 GFRALQ6UXV0 394 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 CLEC20AQ6ZU45 233 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 FOXL2NBQ6ZUU3 175 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 TEN1Q86WV5 123 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 ZCCHC24Q8N2G6 241 aaKnown RBP2.18□□□□□ -2.06
UBBP3-201ENST00000445497 ZFP41Q8N8Y5 198 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 C11orf72Q8NBR9 251 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 ZNF114Q8NC26 417 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 OR1J4Q8NGS1 313 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 PRSS3P2Q8NHM4 247 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 VSTM2AQ8TAG5 236 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 HIST1H2BHQ93079 126 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 RNF185Q96GF1 192 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 HIST1H2BNQ99877 126 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 HIST1H2BMQ99879 126 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 PMCHL2Q9BQD1 86 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 RHNO1Q9BSD3 238 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 PLEKHF2Q9H8W4 249 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 DEPPQ9NTK1 212 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 TMEM242Q9NWH2 141 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 RARRES3Q9UL19 164 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 MOB4Q9Y3A3 225 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 SERP1Q9Y6X1 66 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 VIRMAQ69YN4 1812 aaKnown RBP2.18□□□□□ -2.06
UBBP3-201ENST00000445497 WNK3Q9BYP7 1800 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 NCOA2Q15596 1464 aa2.18□□□□□ -2.06
UBBP3-201ENST00000445497 TOP2AP11388 1531 aaKnown RBP2.17□□□□□ -2.06
UBBP3-201ENST00000445497 CLASP1Q7Z460 1538 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 SYCP2Q9BX26 1530 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 TRBV20-1A0A075B6N2 111 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 A0A0J9YXV3 536 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 TRBV27A0A0K0K1C4 114 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 TEX48A0A1B0GUV7 120 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 FAM181BA6NEQ2 426 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 ZFP92A6NM28 416 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 ZNF705FA8MVS1 300 aaPredicted RBP2.17□□□□□ -2.06
UBBP3-201ENST00000445497 EPM2AB3EWF7 344 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 C9JQL5 133 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 H3BT86 120 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 C19orf84I3L1E1 186 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 PGLYRP1O75594 196 aaPredicted RBP2.17□□□□□ -2.06
UBBP3-201ENST00000445497 NDUFB6O95139 128 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 SOD1P00441 154 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 IGLV3-27P01718 113 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 IGHV4-39P01824 125 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 IGHA1P01876 353 aa2.17□□□□□ -2.06
UBBP3-201ENST00000445497 HLA-DQB1P01920 261 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms