RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 OR1L8Q8NGR8 309 aa13.54□□□□□ -0.24
LIME1-202ENST00000444951 LINC01006Q8NI28 216 aa13.54□□□□□ -0.24
LIME1-202ENST00000444951 CITED1Q99966 193 aa13.54□□□□□ -0.24
LIME1-202ENST00000444951 PDCD10Q9BUL8 212 aa13.54□□□□□ -0.24
LIME1-202ENST00000444951 TMEM14BQ9NUH8 114 aa13.54□□□□□ -0.24
LIME1-202ENST00000444951 FKBP11Q9NYL4 201 aa13.54□□□□□ -0.24
LIME1-202ENST00000444951 GSKIPQ9P0R6 139 aa13.54□□□□□ -0.24
LIME1-202ENST00000444951 A0A1B0GU03 582 aa13.53□□□□□ -0.24
LIME1-202ENST00000444951 CLPSL1A2RUU4 121 aa13.53□□□□□ -0.24
LIME1-202ENST00000444951 TRAPPC2P0DI81 140 aa13.53□□□□□ -0.24
LIME1-202ENST00000444951 TRAPPC2BP0DI82 140 aa13.53□□□□□ -0.24
LIME1-202ENST00000444951 EGR2P11161 476 aaPredicted RBP13.53□□□□□ -0.24
LIME1-202ENST00000444951 IAH1Q2TAA2 248 aaPredicted RBP13.53□□□□□ -0.24
LIME1-202ENST00000444951 UNQ5815/PRO19632Q6UWF5 114 aa13.53□□□□□ -0.24
LIME1-202ENST00000444951 CADM3Q8N126 398 aa13.53□□□□□ -0.24
LIME1-202ENST00000444951 OR10W1Q8NGF6 305 aa13.53□□□□□ -0.24
LIME1-202ENST00000444951 OR10C1Q96KK4 312 aa13.53□□□□□ -0.24
LIME1-202ENST00000444951 SPIN2AQ99865 258 aa13.53□□□□□ -0.24
LIME1-202ENST00000444951 SPIN2BQ9BPZ2 258 aa13.53□□□□□ -0.24
LIME1-202ENST00000444951 C16orf95Q9H693 158 aa13.53□□□□□ -0.24
LIME1-202ENST00000444951 SERTAD4Q9NUC0 356 aa13.53□□□□□ -0.24
LIME1-202ENST00000444951 MGAT4CQ9UBM8 478 aa13.53□□□□□ -0.24
LIME1-202ENST00000444951 TRAV41A0A0B4J266 112 aa13.52□□□□□ -0.25
LIME1-202ENST00000444951 A0A1B0GUS0 222 aa13.52□□□□□ -0.25
LIME1-202ENST00000444951 A0A1B0GW64 132 aa13.52□□□□□ -0.25
LIME1-202ENST00000444951 REG1AP05451 166 aa13.52□□□□□ -0.25
LIME1-202ENST00000444951 HSPE1P61604 102 aaKnown RBP13.52□□□□□ -0.25
LIME1-202ENST00000444951 GSG1LQ6UXU4 331 aa13.52□□□□□ -0.25
LIME1-202ENST00000444951 CENPVQ7Z7K6 275 aaPredicted RBP13.52□□□□□ -0.25
LIME1-202ENST00000444951 STPG2Q8N412 459 aa13.52□□□□□ -0.25
LIME1-202ENST00000444951 MED28Q9H204 178 aa13.52□□□□□ -0.25
LIME1-202ENST00000444951 RNF114Q9Y508 228 aa13.52□□□□□ -0.25
LIME1-202ENST00000444951 PLXNB1O43157 2135 aa13.51□□□□□ -0.25
LIME1-202ENST00000444951 CGB1A6NKQ9 187 aa13.51□□□□□ -0.25
LIME1-202ENST00000444951 CEBPZOSA8MTT3 80 aa13.51□□□□□ -0.25
LIME1-202ENST00000444951 TEX22C9J3V5 150 aa13.51□□□□□ -0.25
LIME1-202ENST00000444951 SCGB1D2O95969 90 aa13.51□□□□□ -0.25
LIME1-202ENST00000444951 FGF2P09038 288 aa13.51□□□□□ -0.25
LIME1-202ENST00000444951 TMEM267Q0VDI3 215 aaPredicted RBP13.51□□□□□ -0.25
LIME1-202ENST00000444951 ZNF329Q86UD4 541 aa13.51□□□□□ -0.25
LIME1-202ENST00000444951 ZNF429Q86V71 674 aa13.51□□□□□ -0.25
LIME1-202ENST00000444951 OR5T1Q8NG75 326 aa13.51□□□□□ -0.25
LIME1-202ENST00000444951 OR5B3Q8NH48 314 aa13.51□□□□□ -0.25
LIME1-202ENST00000444951 NDUFA4L2Q9NRX3 87 aa13.51□□□□□ -0.25
LIME1-202ENST00000444951 hCG_2014768A0A024R1R8 64 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 A0A1W2PN81 502 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 IGF1P05019 195 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 SLC25A6P12236 298 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 AREGP15514 252 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 CHRNA7P36544 502 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 HOXA1P49639 335 aaPredicted RBP13.5□□□□□ -0.25
LIME1-202ENST00000444951 CXorf66Q5JRM2 361 aaPredicted RBP13.5□□□□□ -0.25
LIME1-202ENST00000444951 ASPHD1Q5U4P2 390 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 C10orf99Q6UWK7 81 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 C19orf35Q6ZS72 473 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 KLHDC1Q8N7A1 406 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 ZBTB8BQ8NAP8 495 aaPredicted RBP13.5□□□□□ -0.25
LIME1-202ENST00000444951 MAGT1Q9H0U3 335 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 PLEKHA3Q9HB20 300 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 ENY2Q9NPA8 101 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 COA4Q9NYJ1 87 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 ZNF257Q9Y2Q1 563 aa13.5□□□□□ -0.25
LIME1-202ENST00000444951 TET2Q6N021 2002 aaPredicted RBP13.49□□□□□ -0.25
LIME1-202ENST00000444951 PSMB11A5LHX3 300 aa13.49□□□□□ -0.25
LIME1-202ENST00000444951 OR13C7P0DN81 318 aa13.49□□□□□ -0.25
LIME1-202ENST00000444951 PROK1P58294 105 aa13.49□□□□□ -0.25
LIME1-202ENST00000444951 SPCS3P61009 180 aa13.49□□□□□ -0.25
LIME1-202ENST00000444951 PRCDQ00LT1 54 aa13.49□□□□□ -0.25
LIME1-202ENST00000444951 FCN2Q15485 313 aa13.49□□□□□ -0.25
LIME1-202ENST00000444951 C11orf87Q6NUJ2 197 aa13.49□□□□□ -0.25
LIME1-202ENST00000444951 Q6ZNX1 250 aa13.49□□□□□ -0.25
LIME1-202ENST00000444951 OR5M8Q8NGP6 311 aa13.49□□□□□ -0.25
LIME1-202ENST00000444951 C2orf50Q96LR7 162 aa13.49□□□□□ -0.25
LIME1-202ENST00000444951 RBKSQ9H477 322 aa13.49□□□□□ -0.25
LIME1-202ENST00000444951 ZNF355PQ9NSJ1 428 aa13.49□□□□□ -0.25
LIME1-202ENST00000444951 IGLC7A0M8Q6 106 aa13.48□□□□□ -0.25
LIME1-202ENST00000444951 PITX3O75364 302 aa13.48□□□□□ -0.25
LIME1-202ENST00000444951 SLC35B1P78383 322 aa13.48□□□□□ -0.25
LIME1-202ENST00000444951 TNFRSF9Q07011 255 aa13.48□□□□□ -0.25
LIME1-202ENST00000444951 AKIRIN2Q53H80 203 aa13.48□□□□□ -0.25
LIME1-202ENST00000444951 GON7Q9BXV9 100 aa13.48□□□□□ -0.25
LIME1-202ENST00000444951 TNCP24821 2201 aa13.48□□□□□ -0.25
LIME1-202ENST00000444951 DNAH3Q8TD57 4116 aa13.48□□□□□ -0.25
LIME1-202ENST00000444951 WRBO00258 174 aa13.47□□□□□ -0.25
LIME1-202ENST00000444951 TSPAN15O95858 294 aa13.47□□□□□ -0.25
LIME1-202ENST00000444951 PRH1P02810 166 aa13.47□□□□□ -0.25
LIME1-202ENST00000444951 IAPPP10997 89 aa13.47□□□□□ -0.25
LIME1-202ENST00000444951 CXCL3P19876 107 aa13.47□□□□□ -0.25
LIME1-202ENST00000444951 NKX2-1P43699 371 aaPredicted RBP13.47□□□□□ -0.25
LIME1-202ENST00000444951 CRIP2P52943 208 aaPredicted RBP13.47□□□□□ -0.25
LIME1-202ENST00000444951 RRAS2P62070 204 aaPredicted RBP13.47□□□□□ -0.25
LIME1-202ENST00000444951 WT1-ASQ06250 92 aa13.47□□□□□ -0.25
LIME1-202ENST00000444951 HIST2H2BDQ6DRA6 164 aa13.47□□□□□ -0.25
LIME1-202ENST00000444951 LCNL1Q6ZST4 164 aa13.47□□□□□ -0.25
LIME1-202ENST00000444951 C11orf44Q8N8P7 122 aa13.47□□□□□ -0.25
LIME1-202ENST00000444951 OR5AU1Q8NGC0 362 aa13.47□□□□□ -0.25
LIME1-202ENST00000444951 OR4D5Q8NGN0 318 aa13.47□□□□□ -0.25
LIME1-202ENST00000444951 OR52E5Q8NH55 327 aa13.47□□□□□ -0.25
LIME1-202ENST00000444951 WDR89Q96FK6 387 aaPredicted RBP13.47□□□□□ -0.25
LIME1-202ENST00000444951 MS4A10Q96PG2 267 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms