RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 TFF3Q07654 80 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 ADIPOQQ15848 244 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 C5orf47Q569G3 176 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 SFTPA2Q8IWL1 248 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 SFTPA1Q8IWL2 248 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 OR5AN1Q8NGI8 311 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 FOXB1Q99853 325 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 SLC25A10Q9UBX3 287 aaPredicted RBP4.37□□□□□ -1.71
SCN11A-202ENST00000444237 TMSB15BA0A087X1C1 80 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 SAA2-SAA4A0A096LPE2 208 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 TEX48A0A1B0GUV7 120 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 KLRC4-KLRK1H3BQV0 150 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 DPM2O94777 84 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 AREGP15514 252 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 LGALS3P17931 250 aaKnown RBP4.37□□□□□ -1.71
SCN11A-202ENST00000444237 PMVKQ15126 192 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 MORN3Q6PF18 240 aaPredicted RBP4.37□□□□□ -1.71
SCN11A-202ENST00000444237 PRNTQ86SH4 94 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 ZNF645Q8N7E2 425 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 TMEM101Q96IK0 257 aa4.37□□□□□ -1.71
SCN11A-202ENST00000444237 PRTN3P24158 256 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 S100A4P26447 101 aaKnown RBP4.36□□□□□ -1.71
SCN11A-202ENST00000444237 GDF1P27539 372 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 MEOX1P50221 254 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 FGF12P61328 243 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 HSPE1P61604 102 aaKnown RBP4.36□□□□□ -1.71
SCN11A-202ENST00000444237 VMA21Q3ZAQ7 101 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 MEIG1Q5JSS6 88 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 GATAD1Q8WUU5 269 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 VGLL1Q99990 258 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 TBC1D29Q9UFV1 150 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 SCN1AP35498 2009 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 TRAV2A0A0B4J234 112 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 SIVA1O15304 175 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 IGHMP01871 453 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 CD38P28907 300 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 Q6ZSR6 202 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 PRSS41Q7RTY9 318 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 NABP2Q9BQ15 211 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 R4GN57 208 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 KIAA1217Q5T5P2 1943 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 PGPA6NDG6 321 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 LIPT2A6NK58 231 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 RRHO14718 337 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 CGAP01215 116 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 ACP1P24666 158 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 TNFRSF4P43489 277 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 SAXO1Q8IYX7 474 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 ORMDL3Q8N138 153 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 OR13H1Q8NG92 308 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 OR10J6PQ8NGY7 276 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 FAM222BQ8WU58 562 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 TMEM171Q8WVE6 324 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 RAB1CQ92928 201 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 FOXC2Q99958 501 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 EPDR1Q9UM22 224 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 SH2D7A6NKC9 451 aaPredicted RBP4.36□□□□□ -1.71
SCN11A-202ENST00000444237 FAM157AC9JC47 383 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 PEX7O00628 323 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 TAX1BP3O14907 124 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 IGKCP01834 107 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 RPL15P61313 204 aaKnown RBP4.36□□□□□ -1.71
SCN11A-202ENST00000444237 RHOGP84095 191 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 C3AR1Q16581 482 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 SPEM1Q8N4L4 309 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 NFAM1Q8NET5 270 aaPredicted RBP4.36□□□□□ -1.71
SCN11A-202ENST00000444237 SRSF12Q8WXF0 261 aaKnown RBP4.36□□□□□ -1.71
SCN11A-202ENST00000444237 IFI27L1Q96BM0 104 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 TIMD4Q96H15 378 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 KCNK17Q96T54 332 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 ONECUT1Q9UBC0 465 aa4.36□□□□□ -1.71
SCN11A-202ENST00000444237 ZNF32P17041 273 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 SSR4P51571 173 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 PPP1R27Q86WC6 154 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 RPP25LQ8N5L8 163 aaKnown RBP4.35□□□□□ -1.71
SCN11A-202ENST00000444237 OR10X1Q8NGY0 326 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 RAX2Q96IS3 184 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 CHAC1Q9BUX1 264 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 INSIG2Q9Y5U4 225 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 A0A1W2PPV9 198 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 HOXA4Q00056 320 aaPredicted RBP4.35□□□□□ -1.71
SCN11A-202ENST00000444237 KLF17Q5JT82 389 aaPredicted RBP4.35□□□□□ -1.71
SCN11A-202ENST00000444237 C18orf32Q8TCD1 76 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 FGF22Q9HCT0 170 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 RAXQ9Y2V3 346 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 TRBV7-9A0A0J9YWB2 115 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 J3KT08 172 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 PRKNO60260 465 aaPredicted RBP4.35□□□□□ -1.71
SCN11A-202ENST00000444237 YPEL1O60688 119 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 CD40P25942 277 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 REG1BP48304 166 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 MRPS21P82921 87 aaKnown RBP4.35□□□□□ -1.71
SCN11A-202ENST00000444237 RPRMLQ8N4K4 120 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 WFDC12Q8WWY7 111 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 YPEL2Q96QA6 119 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 TNFRSF19Q9NS68 423 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 TRBV20-1A0A075B6N2 111 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 A0A1B0GX78 115 aa4.35□□□□□ -1.71
SCN11A-202ENST00000444237 EPOPA6NHQ4 379 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms