RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 OR2L13Q8N349 312 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 ARHGEF39Q8N4T4 335 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 OR51T1Q8NGJ9 327 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 OR4A16Q8NH70 328 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 ZNF480Q8WV37 535 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 KISS1RQ969F8 398 aaPredicted RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 SNRNP40Q96DI7 357 aaKnown RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 DUX5Q96PT3 197 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 YPEL2Q96QA6 119 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 OR2A5Q96R48 311 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 APOOQ9BUR5 198 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 RTN4RQ9BZR6 473 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 SLC25A22Q9H936 323 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 TECRQ9NZ01 308 aaKnown RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 NXT1Q9UKK6 140 aaKnown RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 HS3ST2Q9Y278 367 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 ZNF443Q9Y2A4 671 aaPredicted RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 TICRRQ7Z2Z1 1910 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 ARHGEF17Q96PE2 2063 aaPredicted RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 ZNF469Q96JG9 3925 aaPredicted RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 A0A1W2PPM0 123 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 NPIPB15A6NHN6 443 aaPredicted RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 F5H768 121 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 TMEM250H0YL14 139 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 J3QRE1 110 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 K7ENP7 123 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 HRKO00198 91 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 FOXH1O75593 365 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 KLF7O75840 302 aaPredicted RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 CLDN7O95471 211 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 MT-ND6P03923 174 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 GCSHP23434 173 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 SRD5A2P31213 254 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 SLC35B1P78383 322 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 GGTLC2Q14390 218 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 MEIG1Q5JSS6 88 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 TIMM23BQ5SRD1 257 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 OTPQ5XKR4 325 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 IL17RELQ6ZVW7 336 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 PAQR9Q6ZVX9 377 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 SH2D6Q7Z4S9 175 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 LYZL2Q7Z4W2 148 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 LSRQ86X29 649 aaPredicted RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 ZNF611Q8N823 705 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 ZIC4Q8N9L1 334 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 LINC01555Q8NAE3 123 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 GATSQ8NAP1 163 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 NHLRC2Q8NBF2 726 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 OR5AN1Q8NGI8 311 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 OR5D13Q8NGL4 314 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 OR51E1Q8TCB6 317 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 RPS4Y2Q8TD47 263 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 PP6455Q8WZ26 134 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 TMEM230Q96A57 120 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 BMFQ96LC9 184 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 TRIB1Q96RU8 372 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 LIME1Q9H400 295 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 KCNIP2Q9NS61 270 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 RPRMQ9NS64 109 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 TP73-AS1Q9UF72 201 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 HEBP2Q9Y5Z4 205 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 DYSFO75923 2080 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 TGP01266 2768 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 MYLKQ15746 1914 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 MTCL1Q9Y4B5 1905 aaKnown RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 TEX50A0A1B0GTY4 177 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 A0A1W2PP11 408 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 SMIM9A6NGZ8 99 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 FABP5P3A8MUU1 101 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 C11orf94C9JXX5 98 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 ADAM20O43506 726 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 PAGE4O60829 102 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 RENP00797 406 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 CD1AP06126 327 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 CELA3BP08861 270 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 SMIM13P0DJ93 91 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 EGR1P18146 543 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 PRTN3P24158 256 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 ECI1P42126 302 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 LHX2P50458 406 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 PAX9P55771 341 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 KRTAP10-9P60411 292 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 HES1Q14469 280 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 RNPS1Q15287 305 aaKnown RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 TNXAQ16473 311 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 PDLIM3Q53GG5 364 aaPredicted RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 ABHD17CQ6PCB6 329 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 KCTD18Q6PI47 426 aaPredicted RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 TMEM64Q6YI46 380 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 C16orf47Q6ZP98 133 aaPredicted RBP2.35□□□□□ -2.03
LIG4-203ENST00000442234 TMEM252Q8N6L7 170 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 TPRX1Q8N7U7 411 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 OR4F17Q8NGA8 305 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 OR10G9Q8NGN4 311 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 OR1L3Q8NH93 324 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 GLMPQ8WWB7 406 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 ARPC1AQ92747 370 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 ASCL2Q99929 193 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 SPATA25Q9BR10 227 aa2.35□□□□□ -2.03
LIG4-203ENST00000442234 GGTLC1Q9BX51 225 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms