RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 RPRMQ9NS64 109 aa7.47□□□□□ -1.21
HDAC6-209ENST00000440653 PRELID1Q9Y255 219 aa7.47□□□□□ -1.21
HDAC6-209ENST00000440653 A0A087WWC5 75 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 B4DEV8 164 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 C9JQL5 133 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 INS-IGF2F8WCM5 200 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 M0R036 132 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 TNFRSF13BO14836 293 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-209ENST00000440653 IFNA10P01566 189 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 SRP19P09132 144 aaKnown RBP7.46□□□□□ -1.22
HDAC6-209ENST00000440653 FOLR2P14207 255 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 USF1P22415 310 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-209ENST00000440653 LOXP28300 417 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-209ENST00000440653 CD1BP29016 333 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 OPRK1P41145 380 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 ELLP55199 621 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-209ENST00000440653 HSPE1P61604 102 aaKnown RBP7.46□□□□□ -1.22
HDAC6-209ENST00000440653 PRCDQ00LT1 54 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 TMEM177Q53S58 311 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 CBLN2Q8IUK8 224 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 MUC15Q8N387 334 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 OR13D1Q8NGV5 346 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 OR9G1Q8NH87 305 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 H1FXQ92522 213 aaKnown RBP7.46□□□□□ -1.22
HDAC6-209ENST00000440653 CCL17Q92583 94 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 TXNDC17Q9BRA2 123 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 TMEM204Q9BSN7 226 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 VAX2Q9UIW0 290 aa7.46□□□□□ -1.22
HDAC6-209ENST00000440653 AMMECR1Q9Y4X0 333 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-209ENST00000440653 ARFGEF3Q5TH69 2177 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 hCG_1809904A0A1W2PP81 198 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 A0A1W2PPE2 198 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 A0A1W2PR64 198 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 A0A1W2PRV1 198 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 SEC14L6B5MCN3 397 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 PRSS46E5RG02 174 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 TMEM250H0YL14 139 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 UPK2O00526 184 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 CYB5BO43169 146 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 TSPAN9O75954 239 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 CDC34P49427 236 aaPredicted RBP7.45□□□□□ -1.22
HDAC6-209ENST00000440653 PSMB3P49720 205 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 RAB31Q13636 194 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 KRTAP24-1Q3LI83 254 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 FFAR4Q5NUL3 377 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 AVPI1Q5T686 147 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 ETV3LQ6ZN32 361 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 SSX9Q7RTT3 188 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 OR5AN1Q8NGI8 311 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 OR10X1Q8NGY0 326 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 LHX4Q969G2 390 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 TIMD4Q96H15 378 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 HARBI1Q96MB7 349 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 RPS10P5Q9NQ39 176 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 SIRT7Q9NRC8 400 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 SLC39A9Q9NUM3 307 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 DCAF16Q9NXF7 216 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 GNG13Q9P2W3 67 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 CTSZQ9UBR2 303 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 RYR3Q15413 4870 aa7.45□□□□□ -1.22
HDAC6-209ENST00000440653 TET2Q6N021 2002 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-209ENST00000440653 A0A1B0GV50 99 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 A0A1W2PN81 502 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 MEX3AA1L020 520 aaKnown RBP7.44□□□□□ -1.22
HDAC6-209ENST00000440653 SMCO3A2RU48 225 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 CXorf65A6NEN9 183 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 H0YJW9 148 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 J3QR06 171 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 DVL1O14640 695 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 NUPL2O15504 423 aaKnown RBP7.44□□□□□ -1.22
HDAC6-209ENST00000440653 KBTBD11O94819 623 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 IGHV2-70P01814 119 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 MT-ND4LP03901 98 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 IL6RP08887 468 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-209ENST00000440653 CT45A6P0DMU7 189 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 CT45A5P0DMU8 189 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 CT45A7P0DMV0 189 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 MC5RP33032 325 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 CHRNA7P36544 502 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 DLX6P56179 175 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 MEF2BQ02080 365 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-209ENST00000440653 ZNF726P1Q15940 193 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 HAGHQ16775 308 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 ACSM6Q6P461 480 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 FAM122CQ6P4D5 195 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 TMEM88Q6PEY1 159 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 CYB561D1Q8N8Q1 229 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 OR10G9Q8NGN4 311 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 OR10G7Q8NGN6 311 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 OR4C13Q8NGP0 309 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 OR1L8Q8NGR8 309 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 C8orf46Q8TAG6 207 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 LEAP2Q969E1 77 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 TVP23CQ96ET8 276 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 MRPL20Q9BYC9 149 aaKnown RBP7.44□□□□□ -1.22
HDAC6-209ENST00000440653 RAB1BQ9H0U4 201 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 MLXQ9UH92 298 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 WASHC3Q9Y3C0 194 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 OR51B2Q9Y5P1 312 aa7.44□□□□□ -1.22
HDAC6-209ENST00000440653 ARL2-SNX15V9GYD0 113 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms