RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SRRM4A7MD48 611 aaKnown RBP2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 C17orf98A8MV24 154 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 SRRM5B3KS81 715 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 C9JQL5 133 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 MKRN2OSH3BPM6 223 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 RAB29O14966 203 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF737O75373 536 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 CLN5O75503 358 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 SCGB2A1O75556 95 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 CLDN1O95832 211 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 KRASP01116 189 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 LHBP01229 141 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 HBE1P02100 147 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 TFF1P04155 84 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR8U8P0C7N1 319 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 IAPPP10997 89 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 NFYBP25208 207 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 PPP1CCP36873 323 aaKnown RBP2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 CFHR2P36980 270 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 FHITP49789 147 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 PPT1P50897 306 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 KLF3P57682 345 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 UBE2KP61086 200 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 SSTP61278 116 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 RPS23P62266 143 aaKnown RBP2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 RPL30P62888 115 aaKnown RBP2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 HBG1P69891 147 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 HBG2P69892 147 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 PAX5Q02548 391 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 TLE4Q04727 773 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 TMEM267Q0VDI3 215 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 EIF4EBP1Q13541 118 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 ATP6V1FQ16864 119 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 MAJINQ3KP22 176 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 SMUG1Q53HV7 270 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 AKR1C8PQ5T2L2 129 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 FAM159AQ6UWV7 190 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 CD177Q8N6Q3 437 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 RFESDQ8TAC1 157 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 SFT2D1Q8WV19 159 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 TCTEX1D2Q8WW35 142 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 RBMXL1Q96E39 390 aaKnown RBP2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 MRPL53Q96EL3 112 aaKnown RBP2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 COQ2Q96H96 371 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 LITAFQ99732 161 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 PSMG3Q9BT73 122 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 SCRT1Q9BWW7 348 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 PARD6GQ9BYG4 376 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 SLC35B3Q9H1N7 401 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 OR2D2Q9H210 308 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 RBKSQ9H477 322 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 NCOR1P1Q9H4R4 102 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 KCNJ16Q9NPI9 418 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 RPS10P5Q9NQ39 176 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 SMCO4Q9NRQ5 59 aa2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 TNRC6AQ8NDV7 1962 aaKnown RBP2.76□□□□□ -1.97
HMGB3P11-201ENST00000440127 NCOA6Q14686 2063 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 IGKV1D-17A0A075B6S4 117 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 IGHV3OR15-7A0A075B7D8 119 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 IGHV3-43A0A0B4J1X8 118 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 TRAV1-1A0A0B4J248 108 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 A0A1B0GV50 99 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 ODAMA1E959 279 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 LRRC30A6NM36 301 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 COLCA2A8K830 154 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 DEFB108AA8MXU0 73 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 ATP6V1G2-DDX39BF2Z307 99 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 H3BP45 60 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 C15orf65H3BRN8 121 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 K7EM74 188 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 M0R036 132 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 ITGB1BP1O14713 200 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 PPIHO43447 177 aaKnown RBP2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 YPEL1O60688 119 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 RAMP3O60896 148 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 S1PR2O95136 353 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 HPRT1P00492 218 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 OPN1MWP04001 364 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 SRP19P09132 144 aaKnown RBP2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 METTL15P1P0C7V9 234 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 OPN1MW2P0DN77 364 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 OPN1MW3P0DN78 364 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 CGB3P0DN86 165 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 CGB7P0DN87 165 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 IGHV3-43DP0DP04 118 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 SSTR5P35346 364 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 G6PCP35575 357 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 KIR2DS2P43631 304 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 HERV-K104P63124 156 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 CCL20P78556 96 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 SERF2P84101 59 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 TNFAIP6P98066 277 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 RUNX1Q01196 453 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 FLI1Q01543 452 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 TNFRSF9Q07011 255 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 SLC38A11Q08AI6 406 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 ZNF816Q0VGE8 651 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 EDDM3AQ14507 147 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 LRRC75BQ2VPJ9 315 aa2.75□□□□□ -1.97
HMGB3P11-201ENST00000440127 MORN2Q502X0 79 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms