RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SEC22AQ96IW7 307 aa18.11■□□□□ 0.49
VARS-217ENST00000440048 PRR25Q96S07 402 aa18.11■□□□□ 0.49
VARS-217ENST00000440048 OR51B2Q9Y5P1 312 aa18.11■□□□□ 0.49
VARS-217ENST00000440048 ANKRD20A5PA0PJZ0 165 aa18.1■□□□□ 0.49
VARS-217ENST00000440048 DISC1C4P0D8 188 aa18.1■□□□□ 0.49
VARS-217ENST00000440048 ZNF701M0R085 212 aaPredicted RBP18.1■□□□□ 0.49
VARS-217ENST00000440048 NDUFB8O95169 186 aa18.1■□□□□ 0.49
VARS-217ENST00000440048 SERPINE2P07093 398 aa18.1■□□□□ 0.49
VARS-217ENST00000440048 DEFA4P12838 97 aa18.1■□□□□ 0.49
VARS-217ENST00000440048 HIST1H1BP16401 226 aaKnown RBP18.1■□□□□ 0.49
VARS-217ENST00000440048 THOC7Q6I9Y2 204 aaKnown RBP18.1■□□□□ 0.49
VARS-217ENST00000440048 TP53RKQ96S44 253 aa18.1■□□□□ 0.49
VARS-217ENST00000440048 ELOVL1Q9BW60 279 aa18.1■□□□□ 0.49
VARS-217ENST00000440048 NDUFA4L2Q9NRX3 87 aa18.1■□□□□ 0.49
VARS-217ENST00000440048 PRNDQ9UKY0 176 aa18.1■□□□□ 0.49
VARS-217ENST00000440048 IGLV11-55A0A075B6I3 123 aa18.09■□□□□ 0.49
VARS-217ENST00000440048 H0Y980 276 aa18.09■□□□□ 0.49
VARS-217ENST00000440048 BMPR1BO00238 502 aa18.09■□□□□ 0.49
VARS-217ENST00000440048 CTSDP07339 412 aaPredicted RBP18.09■□□□□ 0.49
VARS-217ENST00000440048 SYNJ2BPP57105 145 aa18.09■□□□□ 0.49
VARS-217ENST00000440048 RPEL1Q2QD12 228 aa18.09■□□□□ 0.49
VARS-217ENST00000440048 CCDC71LQ8N9Z2 235 aa18.09■□□□□ 0.49
VARS-217ENST00000440048 OR4C12Q96R67 309 aa18.09■□□□□ 0.49
VARS-217ENST00000440048 TSC22D3Q99576 134 aa18.09■□□□□ 0.49
VARS-217ENST00000440048 HINT2Q9BX68 163 aa18.09■□□□□ 0.49
VARS-217ENST00000440048 COPZ2Q9P299 210 aa18.09■□□□□ 0.49
VARS-217ENST00000440048 ZNF256Q9Y2P7 627 aaPredicted RBP18.09■□□□□ 0.49
VARS-217ENST00000440048 DBX1A6NMT0 343 aa18.08■□□□□ 0.48
VARS-217ENST00000440048 WT1-ASQ06250 92 aa18.08■□□□□ 0.48
VARS-217ENST00000440048 DCTN2Q13561 401 aaKnown RBP18.08■□□□□ 0.48
VARS-217ENST00000440048 H2BFWTQ7Z2G1 175 aa18.08■□□□□ 0.48
VARS-217ENST00000440048 TMEM14BQ9NUH8 114 aa18.08■□□□□ 0.48
VARS-217ENST00000440048 FKBP11Q9NYL4 201 aa18.08■□□□□ 0.48
VARS-217ENST00000440048 COL7A1Q02388 2944 aa18.07■□□□□ 0.48
VARS-217ENST00000440048 C3orf85A0A1B0GTC6 90 aa18.07■□□□□ 0.48
VARS-217ENST00000440048 C15orf61A6NNL5 157 aa18.07■□□□□ 0.48
VARS-217ENST00000440048 IGHV3-23P01764 117 aa18.07■□□□□ 0.48
VARS-217ENST00000440048 OR13C7P0DN81 318 aa18.07■□□□□ 0.48
VARS-217ENST00000440048 FAM209BQ5JX69 171 aa18.07■□□□□ 0.48
VARS-217ENST00000440048 HSD17B13Q7Z5P4 300 aaPredicted RBP18.07■□□□□ 0.48
VARS-217ENST00000440048 OR9G4Q8NGQ1 327 aa18.07■□□□□ 0.48
VARS-217ENST00000440048 DMRT1Q9Y5R6 373 aa18.07■□□□□ 0.48
VARS-217ENST00000440048 S4R3C0 116 aa18.07■□□□□ 0.48
VARS-217ENST00000440048 S100A5P33763 92 aa18.06■□□□□ 0.48
VARS-217ENST00000440048 TATDN3Q17R31 274 aa18.06■□□□□ 0.48
VARS-217ENST00000440048 SP6Q3SY56 376 aa18.06■□□□□ 0.48
VARS-217ENST00000440048 IL34Q6ZMJ4 242 aa18.06■□□□□ 0.48
VARS-217ENST00000440048 GDPD1Q8N9F7 314 aa18.06■□□□□ 0.48
VARS-217ENST00000440048 OR51S1Q8NGJ8 323 aa18.06■□□□□ 0.48
VARS-217ENST00000440048 OR6Q1Q8NGQ2 317 aa18.06■□□□□ 0.48
VARS-217ENST00000440048 OR5B3Q8NH48 314 aa18.06■□□□□ 0.48
VARS-217ENST00000440048 LSM10Q969L4 123 aaKnown RBP18.06■□□□□ 0.48
VARS-217ENST00000440048 PRRT1Q99946 306 aa18.06■□□□□ 0.48
VARS-217ENST00000440048 RTBDNQ9BSG5 229 aaPredicted RBP18.06■□□□□ 0.48
VARS-217ENST00000440048 THAP7Q9BT49 309 aaPredicted RBP18.06■□□□□ 0.48
VARS-217ENST00000440048 C14orf166Q9Y224 244 aaKnown RBP18.06■□□□□ 0.48
VARS-217ENST00000440048 V9GYH0 126 aa18.06■□□□□ 0.48
VARS-217ENST00000440048 PPP5D1E7EU14 171 aa18.05■□□□□ 0.48
VARS-217ENST00000440048 LY86O95711 162 aa18.05■□□□□ 0.48
VARS-217ENST00000440048 IGKV1-5P01602 117 aa18.05■□□□□ 0.48
VARS-217ENST00000440048 SURF2Q15527 256 aaPredicted RBP18.05■□□□□ 0.48
VARS-217ENST00000440048 PYDC2Q56P42 97 aa18.05■□□□□ 0.48
VARS-217ENST00000440048 OR4A16Q8NH70 328 aa18.05■□□□□ 0.48
VARS-217ENST00000440048 EEF1AKMT3Q96AZ1 226 aa18.05■□□□□ 0.48
VARS-217ENST00000440048 CCDC140Q96MF4 163 aa18.05■□□□□ 0.48
VARS-217ENST00000440048 MFSD2BA6NFX1 497 aa18.04■□□□□ 0.48
VARS-217ENST00000440048 SPNP16150 400 aa18.04■□□□□ 0.48
VARS-217ENST00000440048 IZUMO4Q1ZYL8 232 aa18.04■□□□□ 0.48
VARS-217ENST00000440048 CLEC19AQ6UXS0 136 aa18.04■□□□□ 0.48
VARS-217ENST00000440048 HAPLN4Q86UW8 402 aa18.04■□□□□ 0.48
VARS-217ENST00000440048 C5orf66Q9H5L9 145 aa18.04■□□□□ 0.48
VARS-217ENST00000440048 SLC2A8Q9NY64 477 aa18.04■□□□□ 0.48
VARS-217ENST00000440048 GPR132Q9UNW8 380 aa18.04■□□□□ 0.48
VARS-217ENST00000440048 LSM4Q9Y4Z0 139 aaKnown RBP18.04■□□□□ 0.48
VARS-217ENST00000440048 UCP1P25874 307 aa18.03■□□□□ 0.48
VARS-217ENST00000440048 ZNF79Q15937 498 aa18.03■□□□□ 0.48
VARS-217ENST00000440048 TRIM16LQ309B1 348 aa18.03■□□□□ 0.48
VARS-217ENST00000440048 CCDC190Q86UF4 302 aa18.03■□□□□ 0.48
VARS-217ENST00000440048 TRIM63Q969Q1 353 aa18.03■□□□□ 0.48
VARS-217ENST00000440048 CXorf58Q96LI9 332 aa18.03■□□□□ 0.48
VARS-217ENST00000440048 TMEM56Q96MV1 263 aa18.03■□□□□ 0.48
VARS-217ENST00000440048 F11RQ9Y624 299 aaKnown RBP18.03■□□□□ 0.48
VARS-217ENST00000440048 CYB5BO43169 146 aa18.02■□□□□ 0.48
VARS-217ENST00000440048 GGCTO75223 188 aaKnown RBP18.02■□□□□ 0.48
VARS-217ENST00000440048 B3GALNT1O75752 331 aa18.02■□□□□ 0.48
VARS-217ENST00000440048 IGLV1-51P01701 117 aa18.02■□□□□ 0.48
VARS-217ENST00000440048 HLA-AP01891 365 aaKnown RBP18.02■□□□□ 0.48
VARS-217ENST00000440048 CSN3P07498 182 aa18.02■□□□□ 0.48
VARS-217ENST00000440048 P0C879 139 aa18.02■□□□□ 0.48
VARS-217ENST00000440048 MECP2P51608 486 aaKnown RBP18.02■□□□□ 0.48
VARS-217ENST00000440048 SLC25A24Q6NUK1 477 aa18.02■□□□□ 0.48
VARS-217ENST00000440048 Q8N402 240 aa18.02■□□□□ 0.48
VARS-217ENST00000440048 MCUBQ9NWR8 336 aa18.02■□□□□ 0.48
VARS-217ENST00000440048 THYN1Q9P016 225 aa18.02■□□□□ 0.48
VARS-217ENST00000440048 SCP2D1Q9UJQ7 156 aa18.02■□□□□ 0.48
VARS-217ENST00000440048 TRBV7-1A0A0A6YYK4 115 aa18.01■□□□□ 0.47
VARS-217ENST00000440048 TEX13DA0A0J9YY54 714 aaPredicted RBP18.01■□□□□ 0.47
VARS-217ENST00000440048 ATG12O94817 140 aa18.01■□□□□ 0.47
VARS-217ENST00000440048 OR2C1O95371 312 aa18.01■□□□□ 0.47
VARS-217ENST00000440048 ARL3P36405 182 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms