RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 SPINK9Q5DT21 86 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 C10orf91Q5T1B1 145 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 TMEM183AQ8IXX5 376 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 GATAD1Q8WUU5 269 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 SSMEM1Q8WWF3 244 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 POLR3KQ9Y2Y1 108 aaPredicted RBP5.42□□□□□ -1.54
BDNF-211ENST00000439476 RALGAPA1Q6GYQ0 2036 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 A0A1W2PRS3 328 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 C3orf80F5H4A9 247 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 SPINK4O60575 86 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 OTX1P32242 354 aaPredicted RBP5.42□□□□□ -1.54
BDNF-211ENST00000439476 RPL32P62910 135 aaKnown RBP5.42□□□□□ -1.54
BDNF-211ENST00000439476 PSG9Q00887 426 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 PSG4Q00888 419 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 MRPL23Q16540 153 aaKnown RBP5.42□□□□□ -1.54
BDNF-211ENST00000439476 IBA57Q5T440 356 aaKnown RBP5.42□□□□□ -1.54
BDNF-211ENST00000439476 MRPL54Q6P161 138 aaKnown RBP5.42□□□□□ -1.54
BDNF-211ENST00000439476 LAMTOR2Q9Y2Q5 125 aa5.42□□□□□ -1.54
BDNF-211ENST00000439476 IGKV3D-11A0A0A0MRZ8 115 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 IGKV1-9A0A0C4DH69 117 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 A0A0J9YW62 118 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 AMY1AP04745 511 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 C8orf88P0DMB2 117 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 RPL31P62899 125 aaKnown RBP5.41□□□□□ -1.54
BDNF-211ENST00000439476 CHD3Q12873 2000 aaKnown RBP5.41□□□□□ -1.54
BDNF-211ENST00000439476 HES3Q5TGS1 186 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 DNM1P46Q6ZS02 220 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 FAM214BQ7L5A3 538 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 LHFPL1Q86WI0 220 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.41□□□□□ -1.54
BDNF-211ENST00000439476 MAFAQ8NHW3 353 aaPredicted RBP5.41□□□□□ -1.54
BDNF-211ENST00000439476 RNF125Q96EQ8 232 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 RPRMQ9NS64 109 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 AP5S1Q9NUS5 200 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 ASXL3Q9C0F0 2248 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 PRR33A8MZF0 331 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 PGLYRP1O75594 196 aaPredicted RBP5.41□□□□□ -1.54
BDNF-211ENST00000439476 S1PR2O95136 353 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 NDUFB8O95169 186 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 PPP1R17O96001 155 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 FABP2P12104 132 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 HOXA4Q00056 320 aaPredicted RBP5.41□□□□□ -1.54
BDNF-211ENST00000439476 MST1LQ2TV78 715 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 MDP1Q86V88 176 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 GPR146Q96CH1 333 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 MRAP2Q96G30 205 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 PLPPR2Q96GM1 343 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 ZNF714Q96N38 554 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 ZNF319Q9P2F9 582 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 WDFY3Q8IZQ1 3526 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 IGKV1D-8A0A087WSZ0 117 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 CEACAM18A8MTB9 384 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 NPIPB6E9PJ23 425 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 COX7A1P24310 79 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 MAGEA5P43359 124 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 RPL8P62917 257 aaKnown RBP5.41□□□□□ -1.54
BDNF-211ENST00000439476 PRR31Q5SQ13 230 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 TCF24Q7RTU0 167 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 SYT8Q8NBV8 401 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 OR10S1Q8NGN2 331 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 VN1R17PQ8TDU5 208 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 GUCD1Q96NT3 240 aa5.41□□□□□ -1.54
BDNF-211ENST00000439476 SLC25A10Q9UBX3 287 aaPredicted RBP5.41□□□□□ -1.54
BDNF-211ENST00000439476 hCG_38984A0A1B0GV85 526 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 TMEM189A5PLL7 270 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 TCL1AP56279 114 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 SLC25A34Q6PIV7 304 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 ZNF818PQ6ZRF7 136 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 SMRP1Q8NCR6 262 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 ASCL2Q99929 193 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 QTRT1Q9BXR0 403 aaKnown RBP5.4□□□□□ -1.54
BDNF-211ENST00000439476 SNRNP200O75643 2136 aaKnown RBP5.4□□□□□ -1.54
BDNF-211ENST00000439476 IGHV2OR16-5A0A0B4J2B6 119 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 C9JQL5 133 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 HLA-DRB1P01911 266 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 CCL20P78556 96 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 ZNF146Q15072 292 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 TMEM78Q5T7P6 136 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 Q6AWC8 147 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 AMMECR1LQ6DCA0 310 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 WDR82Q6UXN9 313 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 OR52E5Q8NH55 327 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 OR4C12Q96R67 309 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 RBKSQ9H477 322 aa5.4□□□□□ -1.54
BDNF-211ENST00000439476 ZNF256Q9Y2P7 627 aaPredicted RBP5.4□□□□□ -1.54
BDNF-211ENST00000439476 SVILO95425 2214 aa5.4□□□□□ -1.55
BDNF-211ENST00000439476 SPAARA0A1B0GVQ0 90 aa5.4□□□□□ -1.55
BDNF-211ENST00000439476 CDX4O14627 284 aaPredicted RBP5.4□□□□□ -1.55
BDNF-211ENST00000439476 LEPROTL1O95214 131 aa5.4□□□□□ -1.55
BDNF-211ENST00000439476 CA2P00918 260 aa5.4□□□□□ -1.55
BDNF-211ENST00000439476 CFPP27918 469 aa5.4□□□□□ -1.55
BDNF-211ENST00000439476 SRSF6Q13247 344 aaKnown RBP5.4□□□□□ -1.55
BDNF-211ENST00000439476 SPANXN1Q5VSR9 72 aa5.4□□□□□ -1.55
BDNF-211ENST00000439476 SLC35E4Q6ICL7 350 aa5.4□□□□□ -1.55
BDNF-211ENST00000439476 SPINK14Q6IE38 97 aa5.4□□□□□ -1.55
BDNF-211ENST00000439476 FGFRL1Q8N441 504 aa5.4□□□□□ -1.55
BDNF-211ENST00000439476 ZNF488Q96MN9 340 aa5.4□□□□□ -1.55
BDNF-211ENST00000439476 HSPB9Q9BQS6 159 aa5.4□□□□□ -1.55
BDNF-211ENST00000439476 TTTY12Q9BZ98 90 aa5.4□□□□□ -1.55
BDNF-211ENST00000439476 WNT9BO14905 357 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms