RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 SERF2P84101 59 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 PRB3Q04118 309 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 LDLRAD2Q5SZI1 272 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 MMD2Q8IY49 270 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 C9orf106Q8NAJ2 232 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 TMEM45BQ96B21 275 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 HIPK2Q9H2X6 1198 aa8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 SEPSECSQ9HD40 501 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-202ENST00000439374 TRAV3A0A0B4J244 114 aa8.27□□□□□ -1.08
CDC42SE1-202ENST00000439374 TMEM30CPA0ZSE6 113 aa8.27□□□□□ -1.08
CDC42SE1-202ENST00000439374 PPOXP50336 477 aa8.27□□□□□ -1.08
CDC42SE1-202ENST00000439374 MLANAQ16655 118 aa8.27□□□□□ -1.08
CDC42SE1-202ENST00000439374 ZNF324BQ6AW86 544 aaPredicted RBP8.27□□□□□ -1.08
CDC42SE1-202ENST00000439374 FAM214BQ7L5A3 538 aa8.27□□□□□ -1.08
CDC42SE1-202ENST00000439374 MOGAT3Q86VF5 341 aa8.27□□□□□ -1.08
CDC42SE1-202ENST00000439374 OR2D3Q8NGH3 330 aa8.27□□□□□ -1.08
CDC42SE1-202ENST00000439374 SPSB4Q96A44 273 aa8.27□□□□□ -1.08
CDC42SE1-202ENST00000439374 PARD6GQ9BYG4 376 aaPredicted RBP8.27□□□□□ -1.08
CDC42SE1-202ENST00000439374 IL36GQ9NZH8 169 aa8.27□□□□□ -1.08
CDC42SE1-202ENST00000439374 A0A1B0GW64 132 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 A8MXE2 369 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 TDGF1P13385 188 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 GPR12P47775 334 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 ACSF3Q4G176 576 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 ASCL4Q6XD76 172 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 COLCA1Q6ZS62 124 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 ANAPC16Q96DE5 110 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 ELOVL5Q9NYP7 299 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 WIPI2Q9Y4P8 454 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 PXMP4Q9Y6I8 212 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 EXPH5Q8NEV8 1989 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 CHD8Q9HCK8 2581 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 IGKV3D-15A0A087WSY6 115 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 GOSR1O95249 250 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 WT1P19544 449 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 CD1BP29016 333 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 ZNF138P52744 262 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 CATR1Q13166 79 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 DAZAP2Q15038 168 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 ZNF718Q3SXZ3 478 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 RPL39P5Q59GN2 51 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 RPRMLQ8N4K4 120 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 OR13A1Q8NGR1 328 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 MBD3L1Q8WWY6 194 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 LINC00470Q9BZP3 86 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 ZNF71Q9NQZ8 489 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 SLC35D1Q9NTN3 355 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 DECR2Q9NUI1 292 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 LAMTOR2Q9Y2Q5 125 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 YTHDF2Q9Y5A9 579 aaKnown RBP8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 CREBBPQ92793 2442 aa8.27□□□□□ -1.09
CDC42SE1-202ENST00000439374 COL4A2P08572 1712 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 MRPS11P82912 194 aaKnown RBP8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 C17orf112F2Z3M2 114 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 SPINT2O43291 252 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 CECR9P0C854 216 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 GNG4P50150 75 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 MFAP2P55001 183 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 MUC15Q8N387 334 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 TMEM116Q8NCL8 245 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 BLNKQ8WV28 456 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 P2RX4Q99571 388 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 PROCRQ9UNN8 238 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 SPTBN4Q9H254 2564 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 TMEM210A6NLX4 147 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 M0R2Z0 102 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 FTH1P19P0C7X4 201 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 TM4SF20Q53R12 229 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 TPTE2P1Q5T6R2 138 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 LEMD1Q68G75 181 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 C22orf15Q8WYQ4 148 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 ALKBH7Q9BT30 221 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 PRO3102Q9H379 93 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 MS4A5Q9H3V2 200 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 C11orf1Q9H5F2 150 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 ASCL3Q9NQ33 180 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 ZNF355PQ9NSJ1 428 aa8.26□□□□□ -1.09
CDC42SE1-202ENST00000439374 MUC21A0A0G2JKD1 596 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 MUC21A0A140T8X8 626 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 KLK10O43240 276 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 RPL8P62917 257 aaKnown RBP8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 CENPWQ5EE01 88 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 MUC21Q5SSG8 566 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 SSX8Q7RTT4 187 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 KIR3DL3Q8N743 410 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 RNASEH2CQ8TDP1 164 aaKnown RBP8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 PLSCR2Q9NRY7 297 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 DSCAML1Q8TD84 2053 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 DPRXA6NFQ7 191 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 TNFSF13O75888 250 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 RPEL1Q2QD12 228 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 Q5PR19 223 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 OR4A47Q6IF82 309 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 MIR17HGQ75NE6 70 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 WFDC8Q8IUA0 241 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 RND1Q92730 232 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 GMPPAQ96IJ6 420 aaPredicted RBP8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 GP6Q9HCN6 339 aa8.25□□□□□ -1.09
CDC42SE1-202ENST00000439374 ZNRD1Q9P1U0 126 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms