RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 UBE2G1P62253 170 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 SERF2P84101 59 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 IGFL2Q6UWQ7 119 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 ATOH7Q8N100 152 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 TCF19Q9Y242 345 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 FAM215AQ9Y5M1 114 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 BRS3P32247 399 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 HSPE1P61604 102 aaKnown RBP9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 PKIAP61925 76 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 RPL8P62917 257 aaKnown RBP9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 LIME1Q9H400 295 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 DPRXA6NFQ7 191 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 ATP5J2P56134 94 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 TMEM30BQ3MIR4 351 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 Q6P435 159 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 TEPPQ6URK8 271 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 TAF15Q92804 592 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 WASHC3Q9Y3C0 194 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 TM4SF5O14894 197 aa9.65□□□□□ -0.87
TRAPPC9-202ENST00000438773 IGHV2-70P01814 119 aa9.65□□□□□ -0.87
TRAPPC9-202ENST00000438773 ORM2P19652 201 aa9.65□□□□□ -0.87
TRAPPC9-202ENST00000438773 IGF2-ASQ6U949 168 aa9.65□□□□□ -0.87
TRAPPC9-202ENST00000438773 SPNS3Q6ZMD2 512 aa9.65□□□□□ -0.87
TRAPPC9-202ENST00000438773 OR4C5Q8NGB2 326 aa9.65□□□□□ -0.87
TRAPPC9-202ENST00000438773 METTL1Q9UBP6 276 aaKnown RBP9.65□□□□□ -0.87
TRAPPC9-202ENST00000438773 SERTM2A0A1B0GWG4 89 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 NDUFB4O95168 129 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 IGHV2-5P01817 119 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 CDX1P47902 265 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 KHDC3LQ587J8 217 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 C20orf204Q6ZNR8 217 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 C18orf12Q96KH6 178 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 NPVFQ9HCQ7 196 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 RPRMQ9NS64 109 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 NAT8Q9UHE5 227 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 LOC102723971A0A1B0GUV8 181 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 ERASQ7Z444 233 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 C11orf42Q8N5U0 333 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 BLNKQ8WV28 456 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 PITPNC1Q9UKF7 332 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 SLC45A2Q9UMX9 530 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 RPL27AP46776 148 aaKnown RBP9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 SRSF7Q16629 238 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 MORN2Q502X0 79 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 FAM169BQ8N8A8 192 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 SGK494Q96LW2 274 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 CBY1Q9Y3M2 126 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 LINC00312Q9Y6C7 94 aa9.64□□□□□ -0.87
TRAPPC9-202ENST00000438773 SONP18583 2426 aaKnown RBP9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 CEACAM18A8MTB9 384 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 WISP2O76076 250 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 KBTBD11O94819 623 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 LIPFP07098 398 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 BCL2P10415 239 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 KHDC1LQ5JSQ8 128 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 CD177Q8N6Q3 437 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 OR4C13Q8NGP0 309 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 TMEM186Q96B77 213 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 SCRT1Q9BWW7 348 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 CTXND1A0A1B0GTU2 59 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 YPEL1O60688 119 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 DANCRP0C864 163 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 HTR1DP28221 377 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 CEACAM8P31997 349 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 Q56UQ5 140 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 YPEL2Q96QA6 119 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 HSPB9Q9BQS6 159 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 QTRT1Q9BXR0 403 aaKnown RBP9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 C1RLQ9NZP8 487 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 WNK1Q9H4A3 2382 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 IGHV3-21A0A0B4J1V1 117 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 RPL11P62913 178 aaKnown RBP9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 MEF2CQ06413 473 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 CCDC144NLQ6NUI1 221 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 OR4P4Q8NGL7 312 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 CLEC7AQ9BXN2 247 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 HIF1ANQ9NWT6 349 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 THYN1Q9P016 225 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 ANAPC10Q9UM13 185 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 SELENOKQ9Y6D0 94 aa9.63□□□□□ -0.87
TRAPPC9-202ENST00000438773 SNURFLB1AK76 121 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 F2RL2O00254 374 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 RAMP3O60896 148 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 SLC35E3Q7Z769 313 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 PNKDQ8N490 385 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 LRTM2Q8N967 370 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 YLPM1P49750 1951 aaKnown RBP9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 LOC105371242A0A075B767 164 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 C20orf202A1L168 122 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 K7EQM0 130 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 HCP5Q6MZN7 132 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 Q6ZR03 302 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 OR10G8Q8NGN5 311 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 TMUB1Q9BVT8 246 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 FASNP49327 2511 aaKnown RBP9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 BMPR1BO00238 502 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 CHEK1O14757 476 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 CEACAM4O75871 244 aa9.62□□□□□ -0.87
TRAPPC9-202ENST00000438773 IGHV3-48P01763 117 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms