RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 DEFA3P59666 94 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 ASAH1Q13510 395 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 DEFB136Q30KP8 78 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 ETV3LQ6ZN32 361 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 SLC25A42Q86VD7 318 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 SLC35G3Q8N808 338 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 ZNF491Q8N8L2 437 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 OR4F17Q8NGA8 305 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 OR10W1Q8NGF6 305 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 OR1L8Q8NGR8 309 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 RRNAD1Q96FB5 475 aaKnown RBP12.56□□□□□ -0.4
SNRPB-202ENST00000438552 TMEM56Q96MV1 263 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 DUX3Q96PT4 197 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 OR4F4Q96R69 305 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 C20orf85Q9H1P6 137 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 TMEM56-RWDD3S4R434 201 aa12.56□□□□□ -0.4
SNRPB-202ENST00000438552 TRAPPC2P0DI81 140 aa12.55□□□□□ -0.4
SNRPB-202ENST00000438552 TRAPPC2BP0DI82 140 aa12.55□□□□□ -0.4
SNRPB-202ENST00000438552 ANXA7P20073 488 aaKnown RBP12.55□□□□□ -0.4
SNRPB-202ENST00000438552 SLC6A1P30531 599 aa12.55□□□□□ -0.4
SNRPB-202ENST00000438552 ANKRD55Q3KP44 614 aa12.55□□□□□ -0.4
SNRPB-202ENST00000438552 TREML4Q6UXN2 200 aa12.55□□□□□ -0.4
SNRPB-202ENST00000438552 TTC9CQ8N5M4 171 aa12.55□□□□□ -0.4
SNRPB-202ENST00000438552 C4orf3Q8WVX3 66 aa12.55□□□□□ -0.4
SNRPB-202ENST00000438552 IL22RA2Q969J5 263 aa12.55□□□□□ -0.4
SNRPB-202ENST00000438552 UBE2E2Q96LR5 201 aa12.55□□□□□ -0.4
SNRPB-202ENST00000438552 SLA2Q9H6Q3 261 aa12.55□□□□□ -0.4
SNRPB-202ENST00000438552 NDUFA4L2Q9NRX3 87 aa12.55□□□□□ -0.4
SNRPB-202ENST00000438552 A0A0B4J293 547 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 NPIPB5A8MRT5 1133 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 SFT2D2O95562 160 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 IGHV3-11P01762 117 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 PF4P02776 101 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 TCRBP04435 133 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 PSMB6P28072 239 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 UBE2MP61081 183 aaKnown RBP12.54□□□□□ -0.4
SNRPB-202ENST00000438552 SRPXP78539 464 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 SPINK9Q5DT21 86 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 MZT2BQ6NZ67 158 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 FAM219AQ8IW50 185 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 LGI3Q8N145 548 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 OR5B3Q8NH48 314 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 RAX2Q96IS3 184 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 ALX4Q9H161 411 aaPredicted RBP12.54□□□□□ -0.4
SNRPB-202ENST00000438552 NUDT15Q9NV35 164 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 FKBP11Q9NYL4 201 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 ZNF257Q9Y2Q1 563 aa12.54□□□□□ -0.4
SNRPB-202ENST00000438552 TRAV6A0A075B6T7 132 aa12.53□□□□□ -0.4
SNRPB-202ENST00000438552 ST8SIA3O43173 380 aa12.53□□□□□ -0.4
SNRPB-202ENST00000438552 HLA-AP01891 365 aaKnown RBP12.53□□□□□ -0.4
SNRPB-202ENST00000438552 CTRB1P17538 263 aa12.53□□□□□ -0.4
SNRPB-202ENST00000438552 MECP2P51608 486 aaKnown RBP12.53□□□□□ -0.4
SNRPB-202ENST00000438552 WT1-ASQ06250 92 aa12.53□□□□□ -0.4
SNRPB-202ENST00000438552 CTRB2Q6GPI1 263 aa12.53□□□□□ -0.4
SNRPB-202ENST00000438552 THOC7Q6I9Y2 204 aaKnown RBP12.53□□□□□ -0.4
SNRPB-202ENST00000438552 Q6ZRM9 215 aa12.53□□□□□ -0.4
SNRPB-202ENST00000438552 LYZL2Q7Z4W2 148 aa12.53□□□□□ -0.4
SNRPB-202ENST00000438552 LSM10Q969L4 123 aaKnown RBP12.53□□□□□ -0.4
SNRPB-202ENST00000438552 GPR146Q96CH1 333 aa12.53□□□□□ -0.4
SNRPB-202ENST00000438552 SRSF8Q9BRL6 282 aaKnown RBP12.53□□□□□ -0.4
SNRPB-202ENST00000438552 CACNG5Q9UF02 275 aa12.53□□□□□ -0.4
SNRPB-202ENST00000438552 A0A0B4J2A0 478 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 FAM240BA0A1B0GVZ2 78 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 C9orf170A2RU37 121 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 I3L521 148 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 BRI3O95415 125 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 PTTG1O95997 202 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 CRYGCP07315 174 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 OR4E1P0C645 316 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 OR13C7P0DN81 318 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 RHOGP84095 191 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 PRCDQ00LT1 54 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 DHRS2Q13268 280 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 RGS21Q2M5E4 152 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 ZNF429Q86V71 674 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 SHPKQ9UHJ6 478 aa12.52□□□□□ -0.41
SNRPB-202ENST00000438552 TRBV9A0A0B4J1U6 114 aa12.51□□□□□ -0.41
SNRPB-202ENST00000438552 C13orf42A0A1B0GVH6 325 aa12.51□□□□□ -0.41
SNRPB-202ENST00000438552 OR2J3O76001 311 aa12.51□□□□□ -0.41
SNRPB-202ENST00000438552 LGALS1P09382 135 aaKnown RBP12.51□□□□□ -0.41
SNRPB-202ENST00000438552 HSPE1P61604 102 aaKnown RBP12.51□□□□□ -0.41
SNRPB-202ENST00000438552 C4orf46Q504U0 113 aa12.51□□□□□ -0.41
SNRPB-202ENST00000438552 NMSQ5H8A3 153 aa12.51□□□□□ -0.41
SNRPB-202ENST00000438552 LYG2Q86SG7 212 aa12.51□□□□□ -0.41
SNRPB-202ENST00000438552 FANCD2OSQ96PS1 177 aa12.51□□□□□ -0.41
SNRPB-202ENST00000438552 FAM223BA6NKX1 122 aa12.5□□□□□ -0.41
SNRPB-202ENST00000438552 CCL24O00175 119 aa12.5□□□□□ -0.41
SNRPB-202ENST00000438552 NXPH3O95157 252 aa12.5□□□□□ -0.41
SNRPB-202ENST00000438552 DHFRP00374 187 aa12.5□□□□□ -0.41
SNRPB-202ENST00000438552 IFNA17P01571 189 aa12.5□□□□□ -0.41
SNRPB-202ENST00000438552 DEFA4P12838 97 aa12.5□□□□□ -0.41
SNRPB-202ENST00000438552 RAB25P57735 213 aa12.5□□□□□ -0.41
SNRPB-202ENST00000438552 RUNX1Q01196 453 aa12.5□□□□□ -0.41
SNRPB-202ENST00000438552 EXOSC2Q13868 293 aaKnown RBP12.5□□□□□ -0.41
SNRPB-202ENST00000438552 HSD17B13Q7Z5P4 300 aaPredicted RBP12.5□□□□□ -0.41
SNRPB-202ENST00000438552 FAM223AQ8IWN6 122 aa12.5□□□□□ -0.41
SNRPB-202ENST00000438552 LRTM2Q8N967 370 aa12.5□□□□□ -0.41
SNRPB-202ENST00000438552 OR52B4Q8NGK2 314 aa12.5□□□□□ -0.41
SNRPB-202ENST00000438552 ENKURQ8TC29 256 aa12.5□□□□□ -0.41
SNRPB-202ENST00000438552 PDCD10Q9BUL8 212 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms