RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 NPIPB5A8MRT5 1133 aa14.46□□□□□ -0.09
HDAC6-208ENST00000438518 H3BUA1 57 aa14.46□□□□□ -0.09
HDAC6-208ENST00000438518 MED6O75586 246 aa14.46□□□□□ -0.09
HDAC6-208ENST00000438518 BRI3O95415 125 aa14.46□□□□□ -0.09
HDAC6-208ENST00000438518 PPIFP30405 207 aaKnown RBP14.46□□□□□ -0.09
HDAC6-208ENST00000438518 CFHR3Q02985 330 aa14.46□□□□□ -0.09
HDAC6-208ENST00000438518 TNFRSF9Q07011 255 aa14.46□□□□□ -0.09
HDAC6-208ENST00000438518 IAH1Q2TAA2 248 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-208ENST00000438518 TMEM95Q3KNT9 176 aa14.46□□□□□ -0.09
HDAC6-208ENST00000438518 CENPVQ7Z7K6 275 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-208ENST00000438518 TTC9CQ8N5M4 171 aa14.46□□□□□ -0.09
HDAC6-208ENST00000438518 FAM110DQ8TAY7 271 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-208ENST00000438518 ENY2Q9NPA8 101 aa14.46□□□□□ -0.09
HDAC6-208ENST00000438518 TNCP24821 2201 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 C5orf51A6NDU8 294 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 E7EUB6 86 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 CYB5BO43169 146 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 IGHG4P01861 327 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 OPN1MWP04001 364 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 CRYGCP07315 174 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 OPN1MW2P0DN77 364 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 OPN1MW3P0DN78 364 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 ERHP84090 104 aaKnown RBP14.45□□□□□ -0.1
HDAC6-208ENST00000438518 CYCSP99999 105 aaKnown RBP14.45□□□□□ -0.1
HDAC6-208ENST00000438518 KLHDC1Q8N7A1 406 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 ZBTB8BQ8NAP8 495 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-208ENST00000438518 OR4D5Q8NGN0 318 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 OR1L6Q8NGR2 347 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 OR10C1Q96KK4 312 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 C2orf50Q96LR7 162 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 NOL4LQ96MY1 436 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-208ENST00000438518 MED28Q9H204 178 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 ZFP57Q9NU63 452 aa14.45□□□□□ -0.1
HDAC6-208ENST00000438518 C2CD3Q4AC94 2353 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 C13orf42A0A1B0GVH6 325 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 IGLC7A0M8Q6 106 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 MPTX1A8MV57 137 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 GOSR2O14653 212 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 ELANEP08246 267 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 MYOD1P15172 320 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 NKX2-1P43699 371 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-208ENST00000438518 HOXA1P49639 335 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-208ENST00000438518 AWAT1Q58HT5 328 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 ASPHD1Q5U4P2 390 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 TEX38Q6PEX7 206 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 OR4X2Q8NGF9 303 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 WIPF2Q8TF74 440 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-208ENST00000438518 ASB13Q8WXK3 278 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 HINT2Q9BX68 163 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 SLA2Q9H6Q3 261 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 LINC00527Q9UJ94 153 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 WSB1Q9Y6I7 421 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 PLXNB1O43157 2135 aa14.44□□□□□ -0.1
HDAC6-208ENST00000438518 SETD2Q9BYW2 2564 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-208ENST00000438518 A0A1B0GW64 132 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 CEBPZOSA8MTT3 80 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 FAM25EA8MYX2 175 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 G3V318 75 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 CCSO14618 274 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 IGLV1-40P01703 118 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 CTRB1P17538 263 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 PSMB6P28072 239 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 RRAS2P62070 204 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-208ENST00000438518 ID3Q02535 119 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 KRTAP21-3Q3LHN1 58 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 CTRB2Q6GPI1 263 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 ZNF114Q8NC26 417 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 TAF15Q92804 592 aaKnown RBP eCLIP14.43□□□□□ -0.1
HDAC6-208ENST00000438518 CIB3Q96Q77 187 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-208ENST00000438518 NMES1Q9C002 83 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 HIPK2Q9H2X6 1198 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 MGAT4CQ9UBM8 478 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 JMJD1CQ15652 2540 aa14.43□□□□□ -0.1
HDAC6-208ENST00000438518 HMX3A6NHT5 357 aa14.42□□□□□ -0.1
HDAC6-208ENST00000438518 OR13C7P0DN81 318 aa14.42□□□□□ -0.1
HDAC6-208ENST00000438518 HIST1H1BP16401 226 aaKnown RBP14.42□□□□□ -0.1
HDAC6-208ENST00000438518 ATP5IP56385 69 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-208ENST00000438518 WT1-ASQ06250 92 aa14.42□□□□□ -0.1
HDAC6-208ENST00000438518 FOXE3Q13461 319 aa14.42□□□□□ -0.1
HDAC6-208ENST00000438518 Q6ZNX1 250 aa14.42□□□□□ -0.1
HDAC6-208ENST00000438518 OR2C3Q8N628 320 aa14.42□□□□□ -0.1
HDAC6-208ENST00000438518 RNF152Q8N8N0 203 aa14.42□□□□□ -0.1
HDAC6-208ENST00000438518 DTD1Q8TEA8 209 aa14.42□□□□□ -0.1
HDAC6-208ENST00000438518 WRBO00258 174 aa14.41□□□□□ -0.1
HDAC6-208ENST00000438518 SYNGR2O43760 224 aa14.41□□□□□ -0.1
HDAC6-208ENST00000438518 FBXO24O75426 580 aa14.41□□□□□ -0.1
HDAC6-208ENST00000438518 AREGP15514 252 aa14.41□□□□□ -0.1
HDAC6-208ENST00000438518 PSMB8P28062 276 aa14.41□□□□□ -0.1
HDAC6-208ENST00000438518 HTR2BP41595 481 aa14.41□□□□□ -0.1
HDAC6-208ENST00000438518 SUB1P53999 127 aaKnown RBP eCLIP14.41□□□□□ -0.1
HDAC6-208ENST00000438518 KLK9Q2XQG4 91 aa14.41□□□□□ -0.1
HDAC6-208ENST00000438518 NOXA1Q86UR1 476 aa14.41□□□□□ -0.1
HDAC6-208ENST00000438518 OR5AU1Q8NGC0 362 aa14.41□□□□□ -0.1
HDAC6-208ENST00000438518 OR10W1Q8NGF6 305 aa14.41□□□□□ -0.1
HDAC6-208ENST00000438518 WFDC12Q8WWY7 111 aa14.41□□□□□ -0.1
HDAC6-208ENST00000438518 THYN1Q9P016 225 aa14.41□□□□□ -0.1
HDAC6-208ENST00000438518 GSKIPQ9P0R6 139 aa14.41□□□□□ -0.1
HDAC6-208ENST00000438518 KLK9Q9UKQ9 250 aa14.41□□□□□ -0.1
HDAC6-208ENST00000438518 HAX1O00165 279 aa14.4□□□□□ -0.1
HDAC6-208ENST00000438518 DEFA4P12838 97 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms