RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ZNF383Q8NA42 475 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 NPFFR1Q9GZQ6 430 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 NPIPB3Q92617 1050 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 TP53RKQ96S44 253 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 NPCDR1Q9BY65 106 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 DSCR9P59020 149 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 MYOD1P15172 320 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 CRYBA2P53672 197 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 PEAR1Q5VY43 1037 aaPredicted RBP13.4□□□□□ -0.26
PTPN13-204ENST00000436978 INTS1Q8N201 2190 aaKnown RBP13.4□□□□□ -0.26
PTPN13-204ENST00000436978 CA7P43166 264 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 CACNG8Q8WXS5 425 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 GCHFRP30047 84 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 HBBP68871 147 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 SPATA45Q537H7 98 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 LHFPL5Q8TAF8 219 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 RTN4RQ9BZR6 473 aa13.4□□□□□ -0.26
PTPN13-204ENST00000436978 FOLR2P14207 255 aa13.4□□□□□ -0.27
PTPN13-204ENST00000436978 FBXL7Q9UJT9 491 aa13.4□□□□□ -0.27
PTPN13-204ENST00000436978 CRYBB3P26998 211 aa13.39□□□□□ -0.27
PTPN13-204ENST00000436978 ZNF418Q8TF45 676 aaPredicted RBP13.39□□□□□ -0.27
PTPN13-204ENST00000436978 PMCHL2Q9BQD1 86 aa13.39□□□□□ -0.27
PTPN13-204ENST00000436978 ZNF256Q9Y2P7 627 aaPredicted RBP13.39□□□□□ -0.27
PTPN13-204ENST00000436978 E9PLN8 166 aa13.39□□□□□ -0.27
PTPN13-204ENST00000436978 C12orf54Q6X4T0 127 aa13.39□□□□□ -0.27
PTPN13-204ENST00000436978 VKORC1Q9BQB6 163 aa13.39□□□□□ -0.27
PTPN13-204ENST00000436978 C9orf106Q8NAJ2 232 aa13.39□□□□□ -0.27
PTPN13-204ENST00000436978 C7orf69Q9H7B7 122 aa13.39□□□□□ -0.27
PTPN13-204ENST00000436978 KIAA1671Q9BY89 1806 aa13.39□□□□□ -0.27
PTPN13-204ENST00000436978 IFI27L2Q9H2X8 130 aa13.39□□□□□ -0.27
PTPN13-204ENST00000436978 FOXI3A8MTJ6 420 aaPredicted RBP13.39□□□□□ -0.27
PTPN13-204ENST00000436978 ZXDCQ2QGD7 858 aaPredicted RBP13.39□□□□□ -0.27
PTPN13-204ENST00000436978 SDF2L1Q9HCN8 221 aa13.39□□□□□ -0.27
PTPN13-204ENST00000436978 RPL24P83731 157 aaKnown RBP13.38□□□□□ -0.27
PTPN13-204ENST00000436978 NEU1Q99519 415 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 C12orf77C9JDV5 145 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 VENTXO95231 258 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 ZFP36L1Q07352 338 aaKnown RBP13.38□□□□□ -0.27
PTPN13-204ENST00000436978 OR1P1Q8NH06 330 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 HSPB9Q9BQS6 159 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 ASIPP42127 132 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 FAM74A4Q5TZK3 123 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 LRRK1Q38SD2 2015 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 ZDBF2Q9HCK1 2354 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 A1L4Q6 167 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 GPHA2Q96T91 129 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 PSG7Q13046 419 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 HIST1H4GQ99525 98 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 C21orf62Q9NYP8 219 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 A0A1B0GW15 77 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 PRSS2P07478 247 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 CENPWQ5EE01 88 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 SNRPCP09234 159 aaKnown RBP13.38□□□□□ -0.27
PTPN13-204ENST00000436978 KLK2P20151 261 aa13.38□□□□□ -0.27
PTPN13-204ENST00000436978 H2BFSP57053 126 aa13.37□□□□□ -0.27
PTPN13-204ENST00000436978 PARLQ9H300 379 aa13.37□□□□□ -0.27
PTPN13-204ENST00000436978 A0A0G2JK05 382 aa13.37□□□□□ -0.27
PTPN13-204ENST00000436978 RAMP1O60894 148 aa13.37□□□□□ -0.27
PTPN13-204ENST00000436978 FOXA2Q9Y261 457 aaPredicted RBP13.37□□□□□ -0.27
PTPN13-204ENST00000436978 TGFBR3LH3BV60 316 aa13.37□□□□□ -0.27
PTPN13-204ENST00000436978 YPEL1O60688 119 aa13.37□□□□□ -0.27
PTPN13-204ENST00000436978 MBNL2Q5VZF2 373 aaKnown RBP13.37□□□□□ -0.27
PTPN13-204ENST00000436978 VWCEQ96DN2 955 aa13.37□□□□□ -0.27
PTPN13-204ENST00000436978 YPEL2Q96QA6 119 aa13.37□□□□□ -0.27
PTPN13-204ENST00000436978 NBR2O15453 112 aa13.37□□□□□ -0.27
PTPN13-204ENST00000436978 HLA-DRB1P01911 266 aa13.37□□□□□ -0.27
PTPN13-204ENST00000436978 SPACA3Q8IXA5 215 aa13.37□□□□□ -0.27
PTPN13-204ENST00000436978 IL6RP08887 468 aaPredicted RBP13.37□□□□□ -0.27
PTPN13-204ENST00000436978 FABP2P12104 132 aa13.37□□□□□ -0.27
PTPN13-204ENST00000436978 TNFRSF18Q9Y5U5 241 aa13.37□□□□□ -0.27
PTPN13-204ENST00000436978 NMBP08949 121 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 TEX45Q8NA69 505 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 TMEM250H0YL14 139 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 MRAP2Q96G30 205 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 FBXL15Q9H469 300 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 C1QL1O75973 258 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 DUX3Q96PT4 197 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 NCKAP5O14513 1909 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 CELA3BP08861 270 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 Q6AWC8 147 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 THBDP07204 575 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 COL5A1-AS1Q5SY13 56 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 RARRES2Q99969 163 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 ZNF497Q6ZNH5 498 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 COLCA1Q6ZS62 124 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 OR4D5Q8NGN0 318 aa13.36□□□□□ -0.27
PTPN13-204ENST00000436978 SOX21Q9Y651 276 aaPredicted RBP13.35□□□□□ -0.27
PTPN13-204ENST00000436978 IL18BPO95998 194 aa13.35□□□□□ -0.27
PTPN13-204ENST00000436978 TCTAP57738 103 aa13.35□□□□□ -0.27
PTPN13-204ENST00000436978 DPH3Q96FX2 82 aa13.35□□□□□ -0.27
PTPN13-204ENST00000436978 YAE1D1Q9NRH1 226 aa13.35□□□□□ -0.27
PTPN13-204ENST00000436978 TRBV20OR9-2A0A075B6H5 130 aa13.35□□□□□ -0.27
PTPN13-204ENST00000436978 NTN3O00634 580 aaPredicted RBP13.35□□□□□ -0.27
PTPN13-204ENST00000436978 TMEM190Q8WZ59 177 aa13.35□□□□□ -0.27
PTPN13-204ENST00000436978 FAM90A9PA6NNJ1 464 aa13.35□□□□□ -0.27
PTPN13-204ENST00000436978 TRGC2P03986 189 aa13.35□□□□□ -0.27
PTPN13-204ENST00000436978 TMEM262E9PQX1 116 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 TGFAP01135 160 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 UCP1P25874 307 aa13.34□□□□□ -0.27
PTPN13-204ENST00000436978 C2orf68Q2NKX9 166 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms